Protein–RNA interactions for Protein: O43736

ITM2A, Integral membrane protein 2A, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2AO43736 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
ITM2AO43736 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ITM2AO43736 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ITM2AO43736 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ITM2AO43736 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ITM2AO43736 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
ITM2AO43736 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.55■□□□□ 0.88
ITM2AO43736 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
ITM2AO43736 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ITM2AO43736 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ITM2AO43736 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.55■□□□□ 0.88
ITM2AO43736 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
ITM2AO43736 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ITM2AO43736 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ITM2AO43736 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ITM2AO43736 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.55■□□□□ 0.88
ITM2AO43736 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
ITM2AO43736 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
ITM2AO43736 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ITM2AO43736 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ITM2AO43736 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.54■□□□□ 0.88
ITM2AO43736 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ITM2AO43736 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ITM2AO43736 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.54■□□□□ 0.88
ITM2AO43736 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.54■□□□□ 0.88
ITM2AO43736 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.54■□□□□ 0.88
ITM2AO43736 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.54■□□□□ 0.88
ITM2AO43736 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.54■□□□□ 0.88
ITM2AO43736 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
ITM2AO43736 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.54■□□□□ 0.88
ITM2AO43736 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ITM2AO43736 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.54■□□□□ 0.88
ITM2AO43736 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ITM2AO43736 AC007952.6-201ENST00000573168 2673 ntBASIC20.54■□□□□ 0.88
ITM2AO43736 AC003957.1-201ENST00000625108 2673 ntBASIC20.54■□□□□ 0.88
ITM2AO43736 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.54■□□□□ 0.88
ITM2AO43736 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ITM2AO43736 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ITM2AO43736 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ITM2AO43736 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ITM2AO43736 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
ITM2AO43736 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.53■□□□□ 0.88
ITM2AO43736 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ITM2AO43736 AC121338.2-201ENST00000622535 1744 ntBASIC20.53■□□□□ 0.88
ITM2AO43736 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ITM2AO43736 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ITM2AO43736 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ITM2AO43736 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ITM2AO43736 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ITM2AO43736 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.53■□□□□ 0.88
ITM2AO43736 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
ITM2AO43736 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ITM2AO43736 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.53■□□□□ 0.88
ITM2AO43736 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.53■□□□□ 0.88
ITM2AO43736 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
ITM2AO43736 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ITM2AO43736 SYT6-210ENST00000641643 1587 ntBASIC20.52■□□□□ 0.88
ITM2AO43736 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
ITM2AO43736 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.52■□□□□ 0.88
ITM2AO43736 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ITM2AO43736 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ITM2AO43736 GUSBP5-201ENST00000418136 578 ntBASIC20.52■□□□□ 0.88
ITM2AO43736 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.52■□□□□ 0.88
ITM2AO43736 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.52■□□□□ 0.88
ITM2AO43736 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ITM2AO43736 AC136469.2-201ENST00000623944 1028 ntBASIC20.52■□□□□ 0.88
ITM2AO43736 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.52■□□□□ 0.88
ITM2AO43736 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
ITM2AO43736 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
ITM2AO43736 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ITM2AO43736 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
ITM2AO43736 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
ITM2AO43736 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
ITM2AO43736 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
ITM2AO43736 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
ITM2AO43736 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
ITM2AO43736 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
ITM2AO43736 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
ITM2AO43736 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.51■□□□□ 0.87
ITM2AO43736 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ITM2AO43736 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ITM2AO43736 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.51■□□□□ 0.87
ITM2AO43736 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
ITM2AO43736 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ITM2AO43736 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
ITM2AO43736 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ITM2AO43736 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.51■□□□□ 0.87
ITM2AO43736 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
ITM2AO43736 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
ITM2AO43736 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ITM2AO43736 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ITM2AO43736 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
ITM2AO43736 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.51■□□□□ 0.87
ITM2AO43736 SMUG1P1-201ENST00000590640 811 ntBASIC20.51■□□□□ 0.87
ITM2AO43736 AL138724.1-201ENST00000606771 1088 ntBASIC20.51■□□□□ 0.87
ITM2AO43736 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
ITM2AO43736 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.51■□□□□ 0.87
ITM2AO43736 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ITM2AO43736 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
ITM2AO43736 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms