Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 AC010141.2-201ENST00000452426 721 ntBASIC20.99■□□□□ 0.95
LDB2O43679 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.99■□□□□ 0.95
LDB2O43679 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.99■□□□□ 0.95
LDB2O43679 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
LDB2O43679 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.99■□□□□ 0.95
LDB2O43679 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LDB2O43679 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LDB2O43679 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
LDB2O43679 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.98■□□□□ 0.95
LDB2O43679 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.98■□□□□ 0.95
LDB2O43679 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.98■□□□□ 0.95
LDB2O43679 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LDB2O43679 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.98■□□□□ 0.95
LDB2O43679 AC087623.3-201ENST00000607047 1098 ntBASIC20.98■□□□□ 0.95
LDB2O43679 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LDB2O43679 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
LDB2O43679 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LDB2O43679 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.97■□□□□ 0.95
LDB2O43679 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LDB2O43679 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LDB2O43679 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LDB2O43679 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LDB2O43679 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.97■□□□□ 0.95
LDB2O43679 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.97■□□□□ 0.95
LDB2O43679 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
LDB2O43679 POU5F1P4-201ENST00000413175 1085 ntBASIC20.97■□□□□ 0.95
LDB2O43679 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.97■□□□□ 0.95
LDB2O43679 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.97■□□□□ 0.95
LDB2O43679 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.97■□□□□ 0.95
LDB2O43679 AC008175.2-201ENST00000612840 297 ntBASIC20.97■□□□□ 0.95
LDB2O43679 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LDB2O43679 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
LDB2O43679 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LDB2O43679 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.97■□□□□ 0.95
LDB2O43679 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
LDB2O43679 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LDB2O43679 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LDB2O43679 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LDB2O43679 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LDB2O43679 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
LDB2O43679 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LDB2O43679 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LDB2O43679 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.96■□□□□ 0.95
LDB2O43679 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LDB2O43679 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LDB2O43679 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.96■□□□□ 0.95
LDB2O43679 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.96■□□□□ 0.95
LDB2O43679 AP001160.3-201ENST00000601484 763 ntBASIC20.96■□□□□ 0.95
LDB2O43679 AC092666.2-201ENST00000613287 246 ntBASIC20.96■□□□□ 0.95
LDB2O43679 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.96■□□□□ 0.95
LDB2O43679 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.96■□□□□ 0.95
LDB2O43679 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LDB2O43679 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LDB2O43679 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
LDB2O43679 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LDB2O43679 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LDB2O43679 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.95■□□□□ 0.94
LDB2O43679 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LDB2O43679 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.95■□□□□ 0.94
LDB2O43679 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
LDB2O43679 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
LDB2O43679 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.95■□□□□ 0.94
LDB2O43679 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LDB2O43679 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
LDB2O43679 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LDB2O43679 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
LDB2O43679 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.95■□□□□ 0.94
LDB2O43679 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.95■□□□□ 0.94
LDB2O43679 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LDB2O43679 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LDB2O43679 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LDB2O43679 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
LDB2O43679 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
LDB2O43679 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LDB2O43679 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.94■□□□□ 0.94
LDB2O43679 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LDB2O43679 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
LDB2O43679 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
LDB2O43679 AC034268.1-201ENST00000441047 882 ntBASIC20.94■□□□□ 0.94
LDB2O43679 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.94■□□□□ 0.94
LDB2O43679 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.94■□□□□ 0.94
LDB2O43679 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.94■□□□□ 0.94
LDB2O43679 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.94■□□□□ 0.94
LDB2O43679 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.94■□□□□ 0.94
LDB2O43679 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
LDB2O43679 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LDB2O43679 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LDB2O43679 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LDB2O43679 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
LDB2O43679 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.94■□□□□ 0.94
LDB2O43679 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
LDB2O43679 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
LDB2O43679 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LDB2O43679 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LDB2O43679 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LDB2O43679 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
LDB2O43679 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LDB2O43679 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LDB2O43679 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LDB2O43679 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms