Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV8-6A0A0B4J262 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV8-6A0A0B4J262 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC15.36■□□□□ 0.05
TRAV8-6A0A0B4J262 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC15.36■□□□□ 0.05
TRAV8-6A0A0B4J262 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC15.36■□□□□ 0.05
TRAV8-6A0A0B4J262 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV8-6A0A0B4J262 STX6-204ENST00000542060 4809 ntTSL 2 BASIC15.35■□□□□ 0.05
TRAV8-6A0A0B4J262 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV8-6A0A0B4J262 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV8-6A0A0B4J262 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC15.35■□□□□ 0.05
TRAV8-6A0A0B4J262 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV8-6A0A0B4J262 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV8-6A0A0B4J262 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV8-6A0A0B4J262 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV8-6A0A0B4J262 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV8-6A0A0B4J262 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
TRAV8-6A0A0B4J262 C17orf82-201ENST00000623772 1530 ntBASIC15.35■□□□□ 0.05
TRAV8-6A0A0B4J262 TRIR-202ENST00000588213 841 ntTSL 3 BASIC15.35■□□□□ 0.05
TRAV8-6A0A0B4J262 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC15.35■□□□□ 0.05
TRAV8-6A0A0B4J262 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
TRAV8-6A0A0B4J262 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV8-6A0A0B4J262 ADM-207ENST00000530439 1839 ntTSL 2 BASIC15.35■□□□□ 0.05
TRAV8-6A0A0B4J262 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV8-6A0A0B4J262 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV8-6A0A0B4J262 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV8-6A0A0B4J262 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV8-6A0A0B4J262 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV8-6A0A0B4J262 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV8-6A0A0B4J262 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV8-6A0A0B4J262 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
TRAV8-6A0A0B4J262 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV8-6A0A0B4J262 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV8-6A0A0B4J262 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV8-6A0A0B4J262 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV8-6A0A0B4J262 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV8-6A0A0B4J262 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
TRAV8-6A0A0B4J262 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV8-6A0A0B4J262 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV8-6A0A0B4J262 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV8-6A0A0B4J262 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
TRAV8-6A0A0B4J262 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
TRAV8-6A0A0B4J262 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
TRAV8-6A0A0B4J262 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV8-6A0A0B4J262 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV8-6A0A0B4J262 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV8-6A0A0B4J262 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC15.34■□□□□ 0.05
TRAV8-6A0A0B4J262 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV8-6A0A0B4J262 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC15.34■□□□□ 0.05
TRAV8-6A0A0B4J262 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC15.34■□□□□ 0.05
TRAV8-6A0A0B4J262 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC15.34■□□□□ 0.05
TRAV8-6A0A0B4J262 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC15.34■□□□□ 0.05
TRAV8-6A0A0B4J262 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV8-6A0A0B4J262 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC15.34■□□□□ 0.05
TRAV8-6A0A0B4J262 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
TRAV8-6A0A0B4J262 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC15.34■□□□□ 0.05
TRAV8-6A0A0B4J262 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV8-6A0A0B4J262 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV8-6A0A0B4J262 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC15.34■□□□□ 0.05
TRAV8-6A0A0B4J262 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV8-6A0A0B4J262 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
TRAV8-6A0A0B4J262 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV8-6A0A0B4J262 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC15.34■□□□□ 0.05
TRAV8-6A0A0B4J262 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV8-6A0A0B4J262 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC15.34■□□□□ 0.05
TRAV8-6A0A0B4J262 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV8-6A0A0B4J262 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC15.33■□□□□ 0.05
TRAV8-6A0A0B4J262 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC15.33■□□□□ 0.05
TRAV8-6A0A0B4J262 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRAV8-6A0A0B4J262 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
TRAV8-6A0A0B4J262 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC15.33■□□□□ 0.05
TRAV8-6A0A0B4J262 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
TRAV8-6A0A0B4J262 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC15.33■□□□□ 0.05
TRAV8-6A0A0B4J262 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV8-6A0A0B4J262 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV8-6A0A0B4J262 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
TRAV8-6A0A0B4J262 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
TRAV8-6A0A0B4J262 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC15.33■□□□□ 0.04
TRAV8-6A0A0B4J262 AL158211.5-201ENST00000623583 2518 ntBASIC15.33■□□□□ 0.04
TRAV8-6A0A0B4J262 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV8-6A0A0B4J262 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV8-6A0A0B4J262 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC15.33■□□□□ 0.04
TRAV8-6A0A0B4J262 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV8-6A0A0B4J262 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC15.33■□□□□ 0.04
TRAV8-6A0A0B4J262 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC15.33■□□□□ 0.04
TRAV8-6A0A0B4J262 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV8-6A0A0B4J262 AC009086.3-201ENST00000623486 1008 ntBASIC15.33■□□□□ 0.04
TRAV8-6A0A0B4J262 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
TRAV8-6A0A0B4J262 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC15.33■□□□□ 0.04
TRAV8-6A0A0B4J262 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC15.33■□□□□ 0.04
TRAV8-6A0A0B4J262 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV8-6A0A0B4J262 AL353803.4-201ENST00000565882 1934 ntBASIC15.33■□□□□ 0.04
TRAV8-6A0A0B4J262 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC15.33■□□□□ 0.04
TRAV8-6A0A0B4J262 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV8-6A0A0B4J262 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV8-6A0A0B4J262 GATM-206ENST00000558336 1522 ntTSL 2 BASIC15.33■□□□□ 0.04
TRAV8-6A0A0B4J262 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV8-6A0A0B4J262 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV8-6A0A0B4J262 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV8-6A0A0B4J262 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV8-6A0A0B4J262 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms