Protein–RNA interactions for Protein: Q9UL41

PNMA3, Paraneoplastic antigen Ma3, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA3Q9UL41 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC31.27■■■□□ 2.6
PNMA3Q9UL41 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC31.26■■■□□ 2.59
PNMA3Q9UL41 RNF166-209ENST00000567844 633 ntTSL 5 BASIC31.25■■■□□ 2.59
PNMA3Q9UL41 MIR6090-201ENST00000622481 60 ntBASIC31.25■■■□□ 2.59
PNMA3Q9UL41 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC31.25■■■□□ 2.59
PNMA3Q9UL41 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
PNMA3Q9UL41 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC31.23■■■□□ 2.59
PNMA3Q9UL41 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC31.22■■■□□ 2.59
PNMA3Q9UL41 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC31.22■■■□□ 2.59
PNMA3Q9UL41 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
PNMA3Q9UL41 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC31.2■■■□□ 2.59
PNMA3Q9UL41 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
PNMA3Q9UL41 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC31.19■■■□□ 2.58
PNMA3Q9UL41 MIR3648-2-201ENST00000581792 180 ntBASIC31.19■■■□□ 2.58
PNMA3Q9UL41 MIR3648-1-201ENST00000615959 180 ntBASIC31.19■■■□□ 2.58
PNMA3Q9UL41 GDI1-215ENST00000630693 786 ntTSL 4 BASIC31.18■■■□□ 2.58
PNMA3Q9UL41 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC31.18■■■□□ 2.58
PNMA3Q9UL41 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
PNMA3Q9UL41 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
PNMA3Q9UL41 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC31.16■■■□□ 2.58
PNMA3Q9UL41 AGPS-202ENST00000409888 815 ntTSL 4 BASIC31.16■■■□□ 2.58
PNMA3Q9UL41 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC31.16■■■□□ 2.58
PNMA3Q9UL41 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC31.16■■■□□ 2.58
PNMA3Q9UL41 AC016575.1-201ENST00000607026 382 ntBASIC31.16■■■□□ 2.58
PNMA3Q9UL41 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
PNMA3Q9UL41 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC31.15■■■□□ 2.58
PNMA3Q9UL41 LINC01971-201ENST00000617888 1048 ntBASIC31.15■■■□□ 2.58
PNMA3Q9UL41 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
PNMA3Q9UL41 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
PNMA3Q9UL41 CALM3-209ENST00000597743 577 ntTSL 4 BASIC31.14■■■□□ 2.58
PNMA3Q9UL41 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
PNMA3Q9UL41 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
PNMA3Q9UL41 DUX4L11-201ENST00000611504 1267 ntBASIC31.12■■■□□ 2.57
PNMA3Q9UL41 DUX4L12-201ENST00000614593 1267 ntBASIC31.12■■■□□ 2.57
PNMA3Q9UL41 DUX4L14-201ENST00000621227 1267 ntBASIC31.12■■■□□ 2.57
PNMA3Q9UL41 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
PNMA3Q9UL41 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC31.11■■■□□ 2.57
PNMA3Q9UL41 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
PNMA3Q9UL41 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC31.1■■■□□ 2.57
PNMA3Q9UL41 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC31.1■■■□□ 2.57
PNMA3Q9UL41 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
PNMA3Q9UL41 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC31.08■■■□□ 2.57
PNMA3Q9UL41 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
PNMA3Q9UL41 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC31.06■■■□□ 2.56
PNMA3Q9UL41 CR559946.2-201ENST00000623684 991 ntBASIC31.06■■■□□ 2.56
PNMA3Q9UL41 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
PNMA3Q9UL41 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC31.05■■■□□ 2.56
PNMA3Q9UL41 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
PNMA3Q9UL41 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC31.03■■■□□ 2.56
PNMA3Q9UL41 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC31.03■■■□□ 2.56
PNMA3Q9UL41 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC31.02■■■□□ 2.56
PNMA3Q9UL41 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
PNMA3Q9UL41 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
PNMA3Q9UL41 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
PNMA3Q9UL41 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC31■■■□□ 2.55
PNMA3Q9UL41 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC31■■■□□ 2.55
PNMA3Q9UL41 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC30.99■■■□□ 2.55
PNMA3Q9UL41 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC30.99■■■□□ 2.55
PNMA3Q9UL41 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
PNMA3Q9UL41 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC30.98■■■□□ 2.55
PNMA3Q9UL41 HSD17B1P1-201ENST00000590052 955 ntBASIC30.98■■■□□ 2.55
PNMA3Q9UL41 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
PNMA3Q9UL41 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
PNMA3Q9UL41 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
PNMA3Q9UL41 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
PNMA3Q9UL41 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC30.96■■■□□ 2.55
PNMA3Q9UL41 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC30.94■■■□□ 2.54
PNMA3Q9UL41 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC30.93■■■□□ 2.54
PNMA3Q9UL41 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC30.92■■■□□ 2.54
PNMA3Q9UL41 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
PNMA3Q9UL41 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
PNMA3Q9UL41 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
PNMA3Q9UL41 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC30.9■■■□□ 2.54
PNMA3Q9UL41 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC30.9■■■□□ 2.54
PNMA3Q9UL41 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC30.9■■■□□ 2.54
PNMA3Q9UL41 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC30.89■■■□□ 2.54
PNMA3Q9UL41 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
PNMA3Q9UL41 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
PNMA3Q9UL41 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
PNMA3Q9UL41 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC30.85■■■□□ 2.53
PNMA3Q9UL41 BRD4-212ENST00000630599 726 ntTSL 2 BASIC30.85■■■□□ 2.53
PNMA3Q9UL41 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
PNMA3Q9UL41 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC30.84■■■□□ 2.53
PNMA3Q9UL41 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC30.83■■■□□ 2.53
PNMA3Q9UL41 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC30.82■■■□□ 2.53
PNMA3Q9UL41 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
PNMA3Q9UL41 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
PNMA3Q9UL41 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC30.81■■■□□ 2.52
PNMA3Q9UL41 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC30.81■■■□□ 2.52
PNMA3Q9UL41 ABHD17AP3-201ENST00000503096 1137 ntBASIC30.81■■■□□ 2.52
PNMA3Q9UL41 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC30.8■■■□□ 2.52
PNMA3Q9UL41 DUX4L13-201ENST00000554103 1267 ntBASIC30.8■■■□□ 2.52
PNMA3Q9UL41 DUX4L15-201ENST00000611059 1267 ntBASIC30.8■■■□□ 2.52
PNMA3Q9UL41 DUX4L23-201ENST00000615195 1269 ntBASIC30.8■■■□□ 2.52
PNMA3Q9UL41 DUX4L24-201ENST00000617576 1269 ntBASIC30.8■■■□□ 2.52
PNMA3Q9UL41 DUX4L22-201ENST00000618238 1269 ntBASIC30.8■■■□□ 2.52
PNMA3Q9UL41 DUX4L20-201ENST00000619712 1269 ntBASIC30.8■■■□□ 2.52
PNMA3Q9UL41 DUX4L21-201ENST00000622058 1269 ntBASIC30.8■■■□□ 2.52
PNMA3Q9UL41 DUX4L10-201ENST00000622460 1267 ntBASIC30.8■■■□□ 2.52
PNMA3Q9UL41 DUX4L25-201ENST00000624915 1269 ntBASIC30.8■■■□□ 2.52
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms