Protein–RNA interactions for Protein: Q8TDX6

CSGALNACT1, Chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1Q8TDX6 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC27.67■■■□□ 2.02
CSGALNACT1Q8TDX6 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
CSGALNACT1Q8TDX6 MIR6090-201ENST00000622481 60 ntBASIC27.66■■■□□ 2.02
CSGALNACT1Q8TDX6 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
CSGALNACT1Q8TDX6 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
CSGALNACT1Q8TDX6 MACF1-219ENST00000484793 834 ntTSL 2 BASIC27.65■■■□□ 2.02
CSGALNACT1Q8TDX6 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
CSGALNACT1Q8TDX6 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC27.64■■■□□ 2.02
CSGALNACT1Q8TDX6 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
CSGALNACT1Q8TDX6 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC27.63■■■□□ 2.01
CSGALNACT1Q8TDX6 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC27.63■■■□□ 2.01
CSGALNACT1Q8TDX6 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
CSGALNACT1Q8TDX6 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC27.62■■■□□ 2.01
CSGALNACT1Q8TDX6 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
CSGALNACT1Q8TDX6 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC27.62■■■□□ 2.01
CSGALNACT1Q8TDX6 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
CSGALNACT1Q8TDX6 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
CSGALNACT1Q8TDX6 MIR639-201ENST00000384974 98 ntBASIC27.61■■■□□ 2.01
CSGALNACT1Q8TDX6 RNF166-209ENST00000567844 633 ntTSL 5 BASIC27.61■■■□□ 2.01
CSGALNACT1Q8TDX6 MIR4449-201ENST00000578365 66 ntBASIC27.61■■■□□ 2.01
CSGALNACT1Q8TDX6 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
CSGALNACT1Q8TDX6 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
CSGALNACT1Q8TDX6 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC27.59■■■□□ 2.01
CSGALNACT1Q8TDX6 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC27.59■■■□□ 2.01
CSGALNACT1Q8TDX6 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC27.59■■■□□ 2.01
CSGALNACT1Q8TDX6 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
CSGALNACT1Q8TDX6 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC27.58■■■□□ 2.01
CSGALNACT1Q8TDX6 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC27.58■■■□□ 2.01
CSGALNACT1Q8TDX6 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
CSGALNACT1Q8TDX6 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC27.57■■■□□ 2
CSGALNACT1Q8TDX6 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC27.57■■■□□ 2
CSGALNACT1Q8TDX6 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
CSGALNACT1Q8TDX6 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC27.56■■■□□ 2
CSGALNACT1Q8TDX6 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC27.56■■■□□ 2
CSGALNACT1Q8TDX6 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC27.56■■■□□ 2
CSGALNACT1Q8TDX6 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC27.55■■■□□ 2
CSGALNACT1Q8TDX6 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC27.55■■■□□ 2
CSGALNACT1Q8TDX6 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
CSGALNACT1Q8TDX6 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC27.54■■■□□ 2
CSGALNACT1Q8TDX6 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC27.54■■■□□ 2
CSGALNACT1Q8TDX6 MIR3648-2-201ENST00000581792 180 ntBASIC27.54■■■□□ 2
CSGALNACT1Q8TDX6 MIR3648-1-201ENST00000615959 180 ntBASIC27.54■■■□□ 2
CSGALNACT1Q8TDX6 GDI1-215ENST00000630693 786 ntTSL 4 BASIC27.54■■■□□ 2
CSGALNACT1Q8TDX6 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC27.53■■■□□ 2
CSGALNACT1Q8TDX6 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC27.53■■■□□ 2
CSGALNACT1Q8TDX6 AC016575.1-201ENST00000607026 382 ntBASIC27.53■■■□□ 2
CSGALNACT1Q8TDX6 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
CSGALNACT1Q8TDX6 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC27.52■■■□□ 2
CSGALNACT1Q8TDX6 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
CSGALNACT1Q8TDX6 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
CSGALNACT1Q8TDX6 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC27.51■■□□□ 1.99
CSGALNACT1Q8TDX6 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC27.51■■□□□ 1.99
CSGALNACT1Q8TDX6 LINC01971-201ENST00000617888 1048 ntBASIC27.51■■□□□ 1.99
CSGALNACT1Q8TDX6 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
CSGALNACT1Q8TDX6 AGPS-202ENST00000409888 815 ntTSL 4 BASIC27.5■■□□□ 1.99
CSGALNACT1Q8TDX6 DUX4L11-201ENST00000611504 1267 ntBASIC27.5■■□□□ 1.99
CSGALNACT1Q8TDX6 DUX4L12-201ENST00000614593 1267 ntBASIC27.5■■□□□ 1.99
CSGALNACT1Q8TDX6 DUX4L14-201ENST00000621227 1267 ntBASIC27.5■■□□□ 1.99
CSGALNACT1Q8TDX6 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
CSGALNACT1Q8TDX6 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
CSGALNACT1Q8TDX6 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
CSGALNACT1Q8TDX6 CALM3-209ENST00000597743 577 ntTSL 4 BASIC27.49■■□□□ 1.99
CSGALNACT1Q8TDX6 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC27.49■■□□□ 1.99
CSGALNACT1Q8TDX6 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
CSGALNACT1Q8TDX6 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
CSGALNACT1Q8TDX6 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
CSGALNACT1Q8TDX6 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC27.46■■□□□ 1.99
CSGALNACT1Q8TDX6 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC27.46■■□□□ 1.99
CSGALNACT1Q8TDX6 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
CSGALNACT1Q8TDX6 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
CSGALNACT1Q8TDX6 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
CSGALNACT1Q8TDX6 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC27.44■■□□□ 1.98
CSGALNACT1Q8TDX6 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
CSGALNACT1Q8TDX6 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC27.43■■□□□ 1.98
CSGALNACT1Q8TDX6 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
CSGALNACT1Q8TDX6 CR559946.2-201ENST00000623684 991 ntBASIC27.41■■□□□ 1.98
CSGALNACT1Q8TDX6 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC27.4■■□□□ 1.98
CSGALNACT1Q8TDX6 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
CSGALNACT1Q8TDX6 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC27.4■■□□□ 1.98
CSGALNACT1Q8TDX6 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC27.38■■□□□ 1.97
CSGALNACT1Q8TDX6 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC27.37■■□□□ 1.97
CSGALNACT1Q8TDX6 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
CSGALNACT1Q8TDX6 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC27.36■■□□□ 1.97
CSGALNACT1Q8TDX6 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CSGALNACT1Q8TDX6 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CSGALNACT1Q8TDX6 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
CSGALNACT1Q8TDX6 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC27.35■■□□□ 1.97
CSGALNACT1Q8TDX6 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC27.34■■□□□ 1.97
CSGALNACT1Q8TDX6 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC27.33■■□□□ 1.97
CSGALNACT1Q8TDX6 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC27.33■■□□□ 1.96
CSGALNACT1Q8TDX6 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CSGALNACT1Q8TDX6 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CSGALNACT1Q8TDX6 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
CSGALNACT1Q8TDX6 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC27.31■■□□□ 1.96
CSGALNACT1Q8TDX6 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC27.31■■□□□ 1.96
CSGALNACT1Q8TDX6 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
CSGALNACT1Q8TDX6 HSD17B1P1-201ENST00000590052 955 ntBASIC27.3■■□□□ 1.96
CSGALNACT1Q8TDX6 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC27.29■■□□□ 1.96
CSGALNACT1Q8TDX6 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CSGALNACT1Q8TDX6 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC27.28■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms