Protein–RNA interactions for Protein: Q8NDV7

TNRC6A, Trinucleotide repeat-containing gene 6A protein, humanhuman

Known RBP Predictions only

Length 1,962 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6AQ8NDV7 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC24.75■■□□□ 1.55
TNRC6AQ8NDV7 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
TNRC6AQ8NDV7 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
TNRC6AQ8NDV7 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC24.74■■□□□ 1.55
TNRC6AQ8NDV7 AC108673.1-201ENST00000510422 1159 ntBASIC24.74■■□□□ 1.55
TNRC6AQ8NDV7 CIB2-204ENST00000557846 934 ntTSL 3 BASIC24.74■■□□□ 1.55
TNRC6AQ8NDV7 MIR3648-2-201ENST00000581792 180 ntBASIC24.74■■□□□ 1.55
TNRC6AQ8NDV7 MIR3648-1-201ENST00000615959 180 ntBASIC24.74■■□□□ 1.55
TNRC6AQ8NDV7 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC24.74■■□□□ 1.55
TNRC6AQ8NDV7 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC24.74■■□□□ 1.55
TNRC6AQ8NDV7 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC24.74■■□□□ 1.55
TNRC6AQ8NDV7 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
TNRC6AQ8NDV7 MIR6090-201ENST00000622481 60 ntBASIC24.71■■□□□ 1.55
TNRC6AQ8NDV7 CR559946.2-201ENST00000623684 991 ntBASIC24.71■■□□□ 1.55
TNRC6AQ8NDV7 MACF1-219ENST00000484793 834 ntTSL 2 BASIC24.7■■□□□ 1.54
TNRC6AQ8NDV7 RNF166-209ENST00000567844 633 ntTSL 5 BASIC24.7■■□□□ 1.54
TNRC6AQ8NDV7 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
TNRC6AQ8NDV7 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC24.69■■□□□ 1.54
TNRC6AQ8NDV7 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
TNRC6AQ8NDV7 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
TNRC6AQ8NDV7 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC24.69■■□□□ 1.54
TNRC6AQ8NDV7 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC24.69■■□□□ 1.54
TNRC6AQ8NDV7 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
TNRC6AQ8NDV7 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
TNRC6AQ8NDV7 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
TNRC6AQ8NDV7 MIR639-201ENST00000384974 98 ntBASIC24.67■■□□□ 1.54
TNRC6AQ8NDV7 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
TNRC6AQ8NDV7 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
TNRC6AQ8NDV7 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC24.66■■□□□ 1.54
TNRC6AQ8NDV7 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC24.66■■□□□ 1.54
TNRC6AQ8NDV7 CALM3-209ENST00000597743 577 ntTSL 4 BASIC24.65■■□□□ 1.54
TNRC6AQ8NDV7 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
TNRC6AQ8NDV7 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
TNRC6AQ8NDV7 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
TNRC6AQ8NDV7 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.53
TNRC6AQ8NDV7 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC24.63■■□□□ 1.53
TNRC6AQ8NDV7 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
TNRC6AQ8NDV7 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC24.62■■□□□ 1.53
TNRC6AQ8NDV7 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
TNRC6AQ8NDV7 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC24.62■■□□□ 1.53
TNRC6AQ8NDV7 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC24.62■■□□□ 1.53
TNRC6AQ8NDV7 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
TNRC6AQ8NDV7 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
TNRC6AQ8NDV7 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
TNRC6AQ8NDV7 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC24.61■■□□□ 1.53
TNRC6AQ8NDV7 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC24.61■■□□□ 1.53
TNRC6AQ8NDV7 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC24.61■■□□□ 1.53
TNRC6AQ8NDV7 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
TNRC6AQ8NDV7 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC24.6■■□□□ 1.53
TNRC6AQ8NDV7 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC24.6■■□□□ 1.53
TNRC6AQ8NDV7 AGPS-202ENST00000409888 815 ntTSL 4 BASIC24.6■■□□□ 1.53
TNRC6AQ8NDV7 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
TNRC6AQ8NDV7 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
TNRC6AQ8NDV7 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
TNRC6AQ8NDV7 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
TNRC6AQ8NDV7 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
TNRC6AQ8NDV7 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC24.58■■□□□ 1.53
TNRC6AQ8NDV7 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.52
TNRC6AQ8NDV7 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
TNRC6AQ8NDV7 DUX4L11-201ENST00000611504 1267 ntBASIC24.57■■□□□ 1.52
TNRC6AQ8NDV7 DUX4L12-201ENST00000614593 1267 ntBASIC24.57■■□□□ 1.52
TNRC6AQ8NDV7 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
TNRC6AQ8NDV7 DUX4L14-201ENST00000621227 1267 ntBASIC24.57■■□□□ 1.52
TNRC6AQ8NDV7 HSD17B1P1-201ENST00000590052 955 ntBASIC24.56■■□□□ 1.52
TNRC6AQ8NDV7 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
TNRC6AQ8NDV7 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC24.55■■□□□ 1.52
TNRC6AQ8NDV7 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC24.55■■□□□ 1.52
TNRC6AQ8NDV7 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
TNRC6AQ8NDV7 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
TNRC6AQ8NDV7 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
TNRC6AQ8NDV7 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC24.52■■□□□ 1.52
TNRC6AQ8NDV7 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
TNRC6AQ8NDV7 LINC01971-201ENST00000617888 1048 ntBASIC24.51■■□□□ 1.51
TNRC6AQ8NDV7 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
TNRC6AQ8NDV7 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
TNRC6AQ8NDV7 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
TNRC6AQ8NDV7 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
TNRC6AQ8NDV7 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
TNRC6AQ8NDV7 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
TNRC6AQ8NDV7 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
TNRC6AQ8NDV7 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC24.47■■□□□ 1.51
TNRC6AQ8NDV7 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
TNRC6AQ8NDV7 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC24.47■■□□□ 1.51
TNRC6AQ8NDV7 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC24.47■■□□□ 1.51
TNRC6AQ8NDV7 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
TNRC6AQ8NDV7 BRD4-212ENST00000630599 726 ntTSL 2 BASIC24.46■■□□□ 1.51
TNRC6AQ8NDV7 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
TNRC6AQ8NDV7 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
TNRC6AQ8NDV7 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
TNRC6AQ8NDV7 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
TNRC6AQ8NDV7 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC24.44■■□□□ 1.5
TNRC6AQ8NDV7 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC24.44■■□□□ 1.5
TNRC6AQ8NDV7 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
TNRC6AQ8NDV7 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC24.43■■□□□ 1.5
TNRC6AQ8NDV7 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
TNRC6AQ8NDV7 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
TNRC6AQ8NDV7 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
TNRC6AQ8NDV7 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC24.42■■□□□ 1.5
TNRC6AQ8NDV7 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TNRC6AQ8NDV7 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms