Protein–RNA interactions for Protein: Q8NDA2

HMCN2, Hemicentin-2, humanhuman

Predictions only

Length 5,059 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN2Q8NDA2 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
HMCN2Q8NDA2 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HMCN2Q8NDA2 MIR6090-201ENST00000622481 60 ntBASIC15.71■□□□□ 0.1
HMCN2Q8NDA2 CIB2-204ENST00000557846 934 ntTSL 3 BASIC15.7■□□□□ 0.1
HMCN2Q8NDA2 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC15.69■□□□□ 0.1
HMCN2Q8NDA2 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMCN2Q8NDA2 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HMCN2Q8NDA2 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC15.69■□□□□ 0.1
HMCN2Q8NDA2 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMCN2Q8NDA2 DUX4L13-201ENST00000554103 1267 ntBASIC15.68■□□□□ 0.1
HMCN2Q8NDA2 DUX4L15-201ENST00000611059 1267 ntBASIC15.68■□□□□ 0.1
HMCN2Q8NDA2 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
HMCN2Q8NDA2 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HMCN2Q8NDA2 DUX4L23-201ENST00000615195 1269 ntBASIC15.68■□□□□ 0.1
HMCN2Q8NDA2 DUX4L24-201ENST00000617576 1269 ntBASIC15.68■□□□□ 0.1
HMCN2Q8NDA2 DUX4L22-201ENST00000618238 1269 ntBASIC15.68■□□□□ 0.1
HMCN2Q8NDA2 DUX4L20-201ENST00000619712 1269 ntBASIC15.68■□□□□ 0.1
HMCN2Q8NDA2 DUX4L21-201ENST00000622058 1269 ntBASIC15.68■□□□□ 0.1
HMCN2Q8NDA2 DUX4L10-201ENST00000622460 1267 ntBASIC15.68■□□□□ 0.1
HMCN2Q8NDA2 DUX4L25-201ENST00000624915 1269 ntBASIC15.68■□□□□ 0.1
HMCN2Q8NDA2 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMCN2Q8NDA2 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HMCN2Q8NDA2 RPS2-209ENST00000529806 993 ntTSL 3 BASIC15.68■□□□□ 0.1
HMCN2Q8NDA2 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMCN2Q8NDA2 MTURN-203ENST00000409688 843 ntTSL 2 BASIC15.67■□□□□ 0.1
HMCN2Q8NDA2 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
HMCN2Q8NDA2 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HMCN2Q8NDA2 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HMCN2Q8NDA2 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC15.67■□□□□ 0.1
HMCN2Q8NDA2 AL033527.3-201ENST00000566366 1196 ntBASIC15.66■□□□□ 0.1
HMCN2Q8NDA2 NTF6A-201ENST00000591175 560 ntBASIC15.66■□□□□ 0.1
HMCN2Q8NDA2 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
HMCN2Q8NDA2 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMCN2Q8NDA2 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMCN2Q8NDA2 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HMCN2Q8NDA2 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC15.65■□□□□ 0.1
HMCN2Q8NDA2 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HMCN2Q8NDA2 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC15.64■□□□□ 0.09
HMCN2Q8NDA2 AL035685.1-201ENST00000636663 812 ntBASIC15.64■□□□□ 0.09
HMCN2Q8NDA2 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC15.64■□□□□ 0.09
HMCN2Q8NDA2 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
HMCN2Q8NDA2 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HMCN2Q8NDA2 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
HMCN2Q8NDA2 AC012354.3-201ENST00000623734 483 ntBASIC15.63■□□□□ 0.09
HMCN2Q8NDA2 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC15.63■□□□□ 0.09
HMCN2Q8NDA2 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC15.63■□□□□ 0.09
HMCN2Q8NDA2 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
HMCN2Q8NDA2 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC15.62■□□□□ 0.09
HMCN2Q8NDA2 GPX1-201ENST00000419349 1106 ntBASIC15.61■□□□□ 0.09
HMCN2Q8NDA2 AC008813.1-201ENST00000536597 885 ntBASIC15.61■□□□□ 0.09
HMCN2Q8NDA2 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
HMCN2Q8NDA2 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC15.61■□□□□ 0.09
HMCN2Q8NDA2 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC15.6■□□□□ 0.09
HMCN2Q8NDA2 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
HMCN2Q8NDA2 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC15.6■□□□□ 0.09
HMCN2Q8NDA2 MIR935-201ENST00000401179 91 ntBASIC15.59■□□□□ 0.09
HMCN2Q8NDA2 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HMCN2Q8NDA2 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
HMCN2Q8NDA2 RARRES2P1-201ENST00000474487 481 ntBASIC15.58■□□□□ 0.08
HMCN2Q8NDA2 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC15.58■□□□□ 0.08
HMCN2Q8NDA2 HES6-205ENST00000409356 528 ntTSL 2 BASIC15.58■□□□□ 0.08
HMCN2Q8NDA2 GFER-205ENST00000569451 517 ntTSL 5 BASIC15.58■□□□□ 0.08
HMCN2Q8NDA2 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC15.57■□□□□ 0.08
HMCN2Q8NDA2 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC15.57■□□□□ 0.08
HMCN2Q8NDA2 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HMCN2Q8NDA2 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HMCN2Q8NDA2 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HMCN2Q8NDA2 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HMCN2Q8NDA2 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HMCN2Q8NDA2 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
HMCN2Q8NDA2 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
HMCN2Q8NDA2 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
HMCN2Q8NDA2 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
HMCN2Q8NDA2 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HMCN2Q8NDA2 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC15.57■□□□□ 0.08
HMCN2Q8NDA2 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC15.57■□□□□ 0.08
HMCN2Q8NDA2 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HMCN2Q8NDA2 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
HMCN2Q8NDA2 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HMCN2Q8NDA2 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC15.55■□□□□ 0.08
HMCN2Q8NDA2 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HMCN2Q8NDA2 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
HMCN2Q8NDA2 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC15.53■□□□□ 0.08
HMCN2Q8NDA2 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HMCN2Q8NDA2 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HMCN2Q8NDA2 WASH5P-204ENST00000632292 975 ntBASIC15.52■□□□□ 0.07
HMCN2Q8NDA2 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HMCN2Q8NDA2 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC15.51■□□□□ 0.07
HMCN2Q8NDA2 AL451085.2-201ENST00000605085 799 ntBASIC15.51■□□□□ 0.07
HMCN2Q8NDA2 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HMCN2Q8NDA2 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC15.51■□□□□ 0.07
HMCN2Q8NDA2 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HMCN2Q8NDA2 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC15.5■□□□□ 0.07
HMCN2Q8NDA2 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
HMCN2Q8NDA2 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC15.49■□□□□ 0.07
HMCN2Q8NDA2 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HMCN2Q8NDA2 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC15.49■□□□□ 0.07
HMCN2Q8NDA2 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HMCN2Q8NDA2 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HMCN2Q8NDA2 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms