Protein–RNA interactions for Protein: Q6DN03

HIST2H2BC, Putative histone H2B type 2-C, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2BCQ6DN03 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
HIST2H2BCQ6DN03 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
HIST2H2BCQ6DN03 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC23.74■■□□□ 1.39
HIST2H2BCQ6DN03 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC23.74■■□□□ 1.39
HIST2H2BCQ6DN03 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC23.74■■□□□ 1.39
HIST2H2BCQ6DN03 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
HIST2H2BCQ6DN03 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
HIST2H2BCQ6DN03 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC23.73■■□□□ 1.39
HIST2H2BCQ6DN03 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC23.73■■□□□ 1.39
HIST2H2BCQ6DN03 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC23.72■■□□□ 1.39
HIST2H2BCQ6DN03 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
HIST2H2BCQ6DN03 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
HIST2H2BCQ6DN03 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC23.7■■□□□ 1.38
HIST2H2BCQ6DN03 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
HIST2H2BCQ6DN03 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
HIST2H2BCQ6DN03 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC23.7■■□□□ 1.38
HIST2H2BCQ6DN03 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC23.7■■□□□ 1.38
HIST2H2BCQ6DN03 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
HIST2H2BCQ6DN03 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
HIST2H2BCQ6DN03 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC23.68■■□□□ 1.38
HIST2H2BCQ6DN03 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
HIST2H2BCQ6DN03 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
HIST2H2BCQ6DN03 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
HIST2H2BCQ6DN03 AC108673.1-201ENST00000510422 1159 ntBASIC23.66■■□□□ 1.38
HIST2H2BCQ6DN03 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
HIST2H2BCQ6DN03 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
HIST2H2BCQ6DN03 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC23.64■■□□□ 1.37
HIST2H2BCQ6DN03 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
HIST2H2BCQ6DN03 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
HIST2H2BCQ6DN03 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
HIST2H2BCQ6DN03 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
HIST2H2BCQ6DN03 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
HIST2H2BCQ6DN03 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
HIST2H2BCQ6DN03 SRP68-213ENST00000629930 165 ntTSL 5 BASIC23.61■■□□□ 1.37
HIST2H2BCQ6DN03 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
HIST2H2BCQ6DN03 GPX1-201ENST00000419349 1106 ntBASIC23.6■■□□□ 1.37
HIST2H2BCQ6DN03 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC23.6■■□□□ 1.37
HIST2H2BCQ6DN03 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC23.6■■□□□ 1.37
HIST2H2BCQ6DN03 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
HIST2H2BCQ6DN03 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
HIST2H2BCQ6DN03 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
HIST2H2BCQ6DN03 AC012354.3-201ENST00000623734 483 ntBASIC23.57■■□□□ 1.36
HIST2H2BCQ6DN03 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
HIST2H2BCQ6DN03 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC23.55■■□□□ 1.36
HIST2H2BCQ6DN03 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC23.55■■□□□ 1.36
HIST2H2BCQ6DN03 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
HIST2H2BCQ6DN03 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
HIST2H2BCQ6DN03 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
HIST2H2BCQ6DN03 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
HIST2H2BCQ6DN03 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
HIST2H2BCQ6DN03 HES6-205ENST00000409356 528 ntTSL 2 BASIC23.54■■□□□ 1.36
HIST2H2BCQ6DN03 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
HIST2H2BCQ6DN03 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
HIST2H2BCQ6DN03 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
HIST2H2BCQ6DN03 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
HIST2H2BCQ6DN03 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
HIST2H2BCQ6DN03 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
HIST2H2BCQ6DN03 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC23.53■■□□□ 1.36
HIST2H2BCQ6DN03 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC23.53■■□□□ 1.36
HIST2H2BCQ6DN03 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
HIST2H2BCQ6DN03 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
HIST2H2BCQ6DN03 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
HIST2H2BCQ6DN03 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
HIST2H2BCQ6DN03 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
HIST2H2BCQ6DN03 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
HIST2H2BCQ6DN03 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
HIST2H2BCQ6DN03 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
HIST2H2BCQ6DN03 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC23.51■■□□□ 1.35
HIST2H2BCQ6DN03 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
HIST2H2BCQ6DN03 RNF126P1-201ENST00000567452 1320 ntBASIC23.51■■□□□ 1.35
HIST2H2BCQ6DN03 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
HIST2H2BCQ6DN03 DUX4L13-201ENST00000554103 1267 ntBASIC23.5■■□□□ 1.35
HIST2H2BCQ6DN03 AL033527.3-201ENST00000566366 1196 ntBASIC23.5■■□□□ 1.35
HIST2H2BCQ6DN03 DUX4L15-201ENST00000611059 1267 ntBASIC23.5■■□□□ 1.35
HIST2H2BCQ6DN03 DUX4L23-201ENST00000615195 1269 ntBASIC23.5■■□□□ 1.35
HIST2H2BCQ6DN03 DUX4L24-201ENST00000617576 1269 ntBASIC23.5■■□□□ 1.35
HIST2H2BCQ6DN03 DUX4L22-201ENST00000618238 1269 ntBASIC23.5■■□□□ 1.35
HIST2H2BCQ6DN03 DUX4L20-201ENST00000619712 1269 ntBASIC23.5■■□□□ 1.35
HIST2H2BCQ6DN03 DUX4L21-201ENST00000622058 1269 ntBASIC23.5■■□□□ 1.35
HIST2H2BCQ6DN03 DUX4L10-201ENST00000622460 1267 ntBASIC23.5■■□□□ 1.35
HIST2H2BCQ6DN03 DUX4L25-201ENST00000624915 1269 ntBASIC23.5■■□□□ 1.35
HIST2H2BCQ6DN03 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC23.5■■□□□ 1.35
HIST2H2BCQ6DN03 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
HIST2H2BCQ6DN03 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC23.49■■□□□ 1.35
HIST2H2BCQ6DN03 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
HIST2H2BCQ6DN03 AC008813.1-201ENST00000536597 885 ntBASIC23.49■■□□□ 1.35
HIST2H2BCQ6DN03 NTF6A-201ENST00000591175 560 ntBASIC23.49■■□□□ 1.35
HIST2H2BCQ6DN03 AC018358.1-201ENST00000631079 1402 ntBASIC23.49■■□□□ 1.35
HIST2H2BCQ6DN03 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
HIST2H2BCQ6DN03 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
HIST2H2BCQ6DN03 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
HIST2H2BCQ6DN03 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
HIST2H2BCQ6DN03 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC23.46■■□□□ 1.35
HIST2H2BCQ6DN03 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
HIST2H2BCQ6DN03 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC23.46■■□□□ 1.35
HIST2H2BCQ6DN03 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
HIST2H2BCQ6DN03 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
HIST2H2BCQ6DN03 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC23.45■■□□□ 1.34
HIST2H2BCQ6DN03 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC23.44■■□□□ 1.34
HIST2H2BCQ6DN03 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC23.43■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms