Protein–RNA interactions for Protein: P83110

HTRA3, Serine protease HTRA3, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA3P83110 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC32.48■■■□□ 2.79
HTRA3P83110 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC32.47■■■□□ 2.79
HTRA3P83110 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
HTRA3P83110 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
HTRA3P83110 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
HTRA3P83110 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.78
HTRA3P83110 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC32.44■■■□□ 2.78
HTRA3P83110 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
HTRA3P83110 AC012354.3-201ENST00000623734 483 ntBASIC32.44■■■□□ 2.78
HTRA3P83110 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC32.44■■■□□ 2.78
HTRA3P83110 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC32.43■■■□□ 2.78
HTRA3P83110 SRP68-213ENST00000629930 165 ntTSL 5 BASIC32.43■■■□□ 2.78
HTRA3P83110 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
HTRA3P83110 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
HTRA3P83110 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
HTRA3P83110 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC32.42■■■□□ 2.78
HTRA3P83110 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC32.42■■■□□ 2.78
HTRA3P83110 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
HTRA3P83110 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC32.42■■■□□ 2.78
HTRA3P83110 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC32.42■■■□□ 2.78
HTRA3P83110 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
HTRA3P83110 WASH5P-204ENST00000632292 975 ntBASIC32.4■■■□□ 2.78
HTRA3P83110 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC32.4■■■□□ 2.78
HTRA3P83110 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC32.4■■■□□ 2.78
HTRA3P83110 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
HTRA3P83110 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
HTRA3P83110 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
HTRA3P83110 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC32.38■■■□□ 2.77
HTRA3P83110 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC32.38■■■□□ 2.77
HTRA3P83110 GPX1-201ENST00000419349 1106 ntBASIC32.38■■■□□ 2.77
HTRA3P83110 AC018358.1-201ENST00000631079 1402 ntBASIC32.37■■■□□ 2.77
HTRA3P83110 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC32.37■■■□□ 2.77
HTRA3P83110 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
HTRA3P83110 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC32.36■■■□□ 2.77
HTRA3P83110 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
HTRA3P83110 AC108673.1-201ENST00000510422 1159 ntBASIC32.34■■■□□ 2.77
HTRA3P83110 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
HTRA3P83110 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC32.33■■■□□ 2.77
HTRA3P83110 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC32.32■■■□□ 2.76
HTRA3P83110 RNF126P1-201ENST00000567452 1320 ntBASIC32.31■■■□□ 2.76
HTRA3P83110 NTF6A-201ENST00000591175 560 ntBASIC32.31■■■□□ 2.76
HTRA3P83110 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
HTRA3P83110 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC32.29■■■□□ 2.76
HTRA3P83110 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
HTRA3P83110 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
HTRA3P83110 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
HTRA3P83110 AL033527.3-201ENST00000566366 1196 ntBASIC32.28■■■□□ 2.76
HTRA3P83110 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
HTRA3P83110 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
HTRA3P83110 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC32.28■■■□□ 2.76
HTRA3P83110 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC32.28■■■□□ 2.76
HTRA3P83110 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC32.28■■■□□ 2.76
HTRA3P83110 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
HTRA3P83110 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
HTRA3P83110 AC019069.1-201ENST00000610008 1333 ntBASIC32.26■■■□□ 2.76
HTRA3P83110 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC32.26■■■□□ 2.76
HTRA3P83110 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
HTRA3P83110 AC008813.1-201ENST00000536597 885 ntBASIC32.26■■■□□ 2.75
HTRA3P83110 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC32.24■■■□□ 2.75
HTRA3P83110 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
HTRA3P83110 HES6-205ENST00000409356 528 ntTSL 2 BASIC32.23■■■□□ 2.75
HTRA3P83110 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC32.23■■■□□ 2.75
HTRA3P83110 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC32.22■■■□□ 2.75
HTRA3P83110 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
HTRA3P83110 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
HTRA3P83110 DUX4L13-201ENST00000554103 1267 ntBASIC32.2■■■□□ 2.75
HTRA3P83110 DUX4L15-201ENST00000611059 1267 ntBASIC32.2■■■□□ 2.75
HTRA3P83110 DUX4L23-201ENST00000615195 1269 ntBASIC32.2■■■□□ 2.75
HTRA3P83110 DUX4L24-201ENST00000617576 1269 ntBASIC32.2■■■□□ 2.75
HTRA3P83110 DUX4L22-201ENST00000618238 1269 ntBASIC32.2■■■□□ 2.75
HTRA3P83110 DUX4L20-201ENST00000619712 1269 ntBASIC32.2■■■□□ 2.75
HTRA3P83110 DUX4L21-201ENST00000622058 1269 ntBASIC32.2■■■□□ 2.75
HTRA3P83110 DUX4L10-201ENST00000622460 1267 ntBASIC32.2■■■□□ 2.75
HTRA3P83110 DUX4L25-201ENST00000624915 1269 ntBASIC32.2■■■□□ 2.75
HTRA3P83110 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC32.19■■■□□ 2.74
HTRA3P83110 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC32.19■■■□□ 2.74
HTRA3P83110 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC32.18■■■□□ 2.74
HTRA3P83110 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
HTRA3P83110 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC32.16■■■□□ 2.74
HTRA3P83110 MTURN-203ENST00000409688 843 ntTSL 2 BASIC32.16■■■□□ 2.74
HTRA3P83110 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC32.16■■■□□ 2.74
HTRA3P83110 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC32.16■■■□□ 2.74
HTRA3P83110 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC32.16■■■□□ 2.74
HTRA3P83110 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
HTRA3P83110 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
HTRA3P83110 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
HTRA3P83110 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC32.14■■■□□ 2.74
HTRA3P83110 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
HTRA3P83110 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC32.14■■■□□ 2.74
HTRA3P83110 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
HTRA3P83110 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC32.13■■■□□ 2.73
HTRA3P83110 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
HTRA3P83110 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC32.13■■■□□ 2.73
HTRA3P83110 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC32.12■■■□□ 2.73
HTRA3P83110 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
HTRA3P83110 TPT1-202ENST00000379055 948 ntTSL 2 BASIC32.08■■■□□ 2.73
HTRA3P83110 CEP120-209ENST00000515110 606 ntTSL 3 BASIC32.08■■■□□ 2.73
HTRA3P83110 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
HTRA3P83110 AL592295.1-201ENST00000400984 884 ntBASIC32.07■■■□□ 2.72
HTRA3P83110 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC32.07■■■□□ 2.72
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms