Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC31.03■■■□□ 2.56
HTTP42858 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC31.02■■■□□ 2.56
HTTP42858 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
HTTP42858 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
HTTP42858 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
HTTP42858 MIR6090-201ENST00000622481 60 ntBASIC31■■■□□ 2.55
HTTP42858 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
HTTP42858 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC31■■■□□ 2.55
HTTP42858 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC30.99■■■□□ 2.55
HTTP42858 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
HTTP42858 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC30.99■■■□□ 2.55
HTTP42858 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC30.99■■■□□ 2.55
HTTP42858 DUX4L11-201ENST00000611504 1267 ntBASIC30.99■■■□□ 2.55
HTTP42858 DUX4L12-201ENST00000614593 1267 ntBASIC30.99■■■□□ 2.55
HTTP42858 DUX4L14-201ENST00000621227 1267 ntBASIC30.99■■■□□ 2.55
HTTP42858 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
HTTP42858 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC30.98■■■□□ 2.55
HTTP42858 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC30.98■■■□□ 2.55
HTTP42858 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC30.98■■■□□ 2.55
HTTP42858 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC30.96■■■□□ 2.55
HTTP42858 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
HTTP42858 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC30.95■■■□□ 2.54
HTTP42858 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
HTTP42858 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
HTTP42858 CIB2-204ENST00000557846 934 ntTSL 3 BASIC30.9■■■□□ 2.54
HTTP42858 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC30.9■■■□□ 2.54
HTTP42858 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC30.89■■■□□ 2.54
HTTP42858 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC30.88■■■□□ 2.53
HTTP42858 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
HTTP42858 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
HTTP42858 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC30.87■■■□□ 2.53
HTTP42858 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC30.87■■■□□ 2.53
HTTP42858 ABHD17AP5-201ENST00000580133 923 ntBASIC30.86■■■□□ 2.53
HTTP42858 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC30.85■■■□□ 2.53
HTTP42858 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC30.84■■■□□ 2.53
HTTP42858 SRP68-213ENST00000629930 165 ntTSL 5 BASIC30.84■■■□□ 2.53
HTTP42858 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
HTTP42858 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
HTTP42858 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
HTTP42858 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
HTTP42858 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
HTTP42858 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC30.8■■■□□ 2.52
HTTP42858 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC30.8■■■□□ 2.52
HTTP42858 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC30.8■■■□□ 2.52
HTTP42858 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC30.8■■■□□ 2.52
HTTP42858 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
HTTP42858 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
HTTP42858 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
HTTP42858 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC30.78■■■□□ 2.52
HTTP42858 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
HTTP42858 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC30.78■■■□□ 2.52
HTTP42858 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
HTTP42858 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
HTTP42858 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC30.76■■■□□ 2.51
HTTP42858 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC30.76■■■□□ 2.51
HTTP42858 METRNL-202ENST00000570778 967 ntTSL 5 BASIC30.75■■■□□ 2.51
HTTP42858 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC30.74■■■□□ 2.51
HTTP42858 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
HTTP42858 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
HTTP42858 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
HTTP42858 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
HTTP42858 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC30.71■■■□□ 2.51
HTTP42858 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
HTTP42858 AC108673.1-201ENST00000510422 1159 ntBASIC30.69■■■□□ 2.5
HTTP42858 DUX4L13-201ENST00000554103 1267 ntBASIC30.69■■■□□ 2.5
HTTP42858 DUX4L15-201ENST00000611059 1267 ntBASIC30.69■■■□□ 2.5
HTTP42858 DUX4L23-201ENST00000615195 1269 ntBASIC30.69■■■□□ 2.5
HTTP42858 DUX4L24-201ENST00000617576 1269 ntBASIC30.69■■■□□ 2.5
HTTP42858 DUX4L22-201ENST00000618238 1269 ntBASIC30.69■■■□□ 2.5
HTTP42858 DUX4L20-201ENST00000619712 1269 ntBASIC30.69■■■□□ 2.5
HTTP42858 DUX4L21-201ENST00000622058 1269 ntBASIC30.69■■■□□ 2.5
HTTP42858 DUX4L10-201ENST00000622460 1267 ntBASIC30.69■■■□□ 2.5
HTTP42858 DUX4L25-201ENST00000624915 1269 ntBASIC30.69■■■□□ 2.5
HTTP42858 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
HTTP42858 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
HTTP42858 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC30.67■■■□□ 2.5
HTTP42858 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
HTTP42858 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC30.66■■■□□ 2.5
HTTP42858 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC30.65■■■□□ 2.5
HTTP42858 RNF126P1-201ENST00000567452 1320 ntBASIC30.65■■■□□ 2.5
HTTP42858 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC30.65■■■□□ 2.5
HTTP42858 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC30.65■■■□□ 2.5
HTTP42858 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC30.64■■■□□ 2.5
HTTP42858 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC30.64■■■□□ 2.49
HTTP42858 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC30.63■■■□□ 2.49
HTTP42858 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
HTTP42858 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
HTTP42858 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC30.6■■■□□ 2.49
HTTP42858 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC30.6■■■□□ 2.49
HTTP42858 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC30.6■■■□□ 2.49
HTTP42858 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
HTTP42858 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC30.59■■■□□ 2.49
HTTP42858 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC30.57■■■□□ 2.48
HTTP42858 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
HTTP42858 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
HTTP42858 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC30.56■■■□□ 2.48
HTTP42858 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
HTTP42858 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC30.55■■■□□ 2.48
HTTP42858 HES6-205ENST00000409356 528 ntTSL 2 BASIC30.55■■■□□ 2.48
HTTP42858 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms