Protein–RNA interactions for Protein: A0A087WT02

TRAV9-2, T-cell receptor alpha variable 9-2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-2A0A087WT02 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC19.63■□□□□ 0.73
TRAV9-2A0A087WT02 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.63■□□□□ 0.73
TRAV9-2A0A087WT02 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
TRAV9-2A0A087WT02 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV9-2A0A087WT02 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
TRAV9-2A0A087WT02 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV9-2A0A087WT02 AC142086.6-201ENST00000621154 1765 ntBASIC19.62■□□□□ 0.73
TRAV9-2A0A087WT02 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV9-2A0A087WT02 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV9-2A0A087WT02 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
TRAV9-2A0A087WT02 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV9-2A0A087WT02 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC19.6■□□□□ 0.73
TRAV9-2A0A087WT02 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV9-2A0A087WT02 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV9-2A0A087WT02 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV9-2A0A087WT02 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
TRAV9-2A0A087WT02 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV9-2A0A087WT02 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC19.59■□□□□ 0.73
TRAV9-2A0A087WT02 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV9-2A0A087WT02 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
TRAV9-2A0A087WT02 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRAV9-2A0A087WT02 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC19.58■□□□□ 0.73
TRAV9-2A0A087WT02 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TRAV9-2A0A087WT02 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
TRAV9-2A0A087WT02 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
TRAV9-2A0A087WT02 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC19.58■□□□□ 0.72
TRAV9-2A0A087WT02 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV9-2A0A087WT02 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC19.57■□□□□ 0.72
TRAV9-2A0A087WT02 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV9-2A0A087WT02 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV9-2A0A087WT02 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC19.56■□□□□ 0.72
TRAV9-2A0A087WT02 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV9-2A0A087WT02 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAV9-2A0A087WT02 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAV9-2A0A087WT02 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC19.55■□□□□ 0.72
TRAV9-2A0A087WT02 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAV9-2A0A087WT02 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV9-2A0A087WT02 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV9-2A0A087WT02 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC19.54■□□□□ 0.72
TRAV9-2A0A087WT02 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV9-2A0A087WT02 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC19.54■□□□□ 0.72
TRAV9-2A0A087WT02 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRAV9-2A0A087WT02 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
TRAV9-2A0A087WT02 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAV9-2A0A087WT02 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRAV9-2A0A087WT02 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRAV9-2A0A087WT02 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC19.49■□□□□ 0.71
TRAV9-2A0A087WT02 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV9-2A0A087WT02 DYNLL1-208ENST00000550178 581 ntBASIC19.49■□□□□ 0.71
TRAV9-2A0A087WT02 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC19.49■□□□□ 0.71
TRAV9-2A0A087WT02 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
TRAV9-2A0A087WT02 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
TRAV9-2A0A087WT02 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC19.48■□□□□ 0.71
TRAV9-2A0A087WT02 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV9-2A0A087WT02 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV9-2A0A087WT02 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV9-2A0A087WT02 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV9-2A0A087WT02 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV9-2A0A087WT02 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV9-2A0A087WT02 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.45■□□□□ 0.7
TRAV9-2A0A087WT02 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV9-2A0A087WT02 AL121749.1-202ENST00000609313 2153 ntBASIC19.44■□□□□ 0.7
TRAV9-2A0A087WT02 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV9-2A0A087WT02 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV9-2A0A087WT02 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC19.44■□□□□ 0.7
TRAV9-2A0A087WT02 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
TRAV9-2A0A087WT02 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV9-2A0A087WT02 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV9-2A0A087WT02 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV9-2A0A087WT02 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.41■□□□□ 0.7
TRAV9-2A0A087WT02 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV9-2A0A087WT02 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
TRAV9-2A0A087WT02 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV9-2A0A087WT02 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
TRAV9-2A0A087WT02 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
TRAV9-2A0A087WT02 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TRAV9-2A0A087WT02 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TRAV9-2A0A087WT02 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
TRAV9-2A0A087WT02 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV9-2A0A087WT02 SNAI3-AS1-204ENST00000567997 2048 ntBASIC19.39■□□□□ 0.69
TRAV9-2A0A087WT02 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV9-2A0A087WT02 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC19.39■□□□□ 0.69
TRAV9-2A0A087WT02 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV9-2A0A087WT02 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV9-2A0A087WT02 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV9-2A0A087WT02 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
TRAV9-2A0A087WT02 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV9-2A0A087WT02 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC19.38■□□□□ 0.69
TRAV9-2A0A087WT02 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC19.38■□□□□ 0.69
TRAV9-2A0A087WT02 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV9-2A0A087WT02 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
TRAV9-2A0A087WT02 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV9-2A0A087WT02 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV9-2A0A087WT02 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC19.37■□□□□ 0.69
TRAV9-2A0A087WT02 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC19.37■□□□□ 0.69
TRAV9-2A0A087WT02 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV9-2A0A087WT02 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV9-2A0A087WT02 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC19.36■□□□□ 0.69
TRAV9-2A0A087WT02 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAV9-2A0A087WT02 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms