Protein–RNA interactions for Protein: Q9BZQ2

SHCBP1L, Testicular spindle-associated protein SHCBP1L, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1LQ9BZQ2 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SHCBP1LQ9BZQ2 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SHCBP1LQ9BZQ2 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.69■□□□□ 0.9
SHCBP1LQ9BZQ2 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.69■□□□□ 0.9
SHCBP1LQ9BZQ2 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.69■□□□□ 0.9
SHCBP1LQ9BZQ2 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.69■□□□□ 0.9
SHCBP1LQ9BZQ2 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.69■□□□□ 0.9
SHCBP1LQ9BZQ2 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
SHCBP1LQ9BZQ2 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SHCBP1LQ9BZQ2 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SHCBP1LQ9BZQ2 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SHCBP1LQ9BZQ2 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SHCBP1LQ9BZQ2 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SHCBP1LQ9BZQ2 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SHCBP1LQ9BZQ2 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SHCBP1LQ9BZQ2 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SHCBP1LQ9BZQ2 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SHCBP1LQ9BZQ2 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SHCBP1LQ9BZQ2 AC131281.2-201ENST00000520478 145 ntBASIC20.68■□□□□ 0.9
SHCBP1LQ9BZQ2 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SHCBP1LQ9BZQ2 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SHCBP1LQ9BZQ2 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
SHCBP1LQ9BZQ2 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SHCBP1LQ9BZQ2 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
SHCBP1LQ9BZQ2 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SHCBP1LQ9BZQ2 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
SHCBP1LQ9BZQ2 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.68■□□□□ 0.9
SHCBP1LQ9BZQ2 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SHCBP1LQ9BZQ2 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SHCBP1LQ9BZQ2 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.67■□□□□ 0.9
SHCBP1LQ9BZQ2 AL034346.1-201ENST00000568244 1277 ntBASIC20.67■□□□□ 0.9
SHCBP1LQ9BZQ2 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.67■□□□□ 0.9
SHCBP1LQ9BZQ2 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SHCBP1LQ9BZQ2 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SHCBP1LQ9BZQ2 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SHCBP1LQ9BZQ2 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SHCBP1LQ9BZQ2 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SHCBP1LQ9BZQ2 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SHCBP1LQ9BZQ2 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.67■□□□□ 0.9
SHCBP1LQ9BZQ2 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SHCBP1LQ9BZQ2 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SHCBP1LQ9BZQ2 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SHCBP1LQ9BZQ2 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SHCBP1LQ9BZQ2 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
SHCBP1LQ9BZQ2 AC011298.3-201ENST00000615796 283 ntBASIC20.66■□□□□ 0.9
SHCBP1LQ9BZQ2 AC136469.2-201ENST00000623944 1028 ntBASIC20.66■□□□□ 0.9
SHCBP1LQ9BZQ2 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.66■□□□□ 0.9
SHCBP1LQ9BZQ2 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SHCBP1LQ9BZQ2 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SHCBP1LQ9BZQ2 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SHCBP1LQ9BZQ2 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
SHCBP1LQ9BZQ2 RNF165-205ENST00000588679 2904 ntBASIC20.66■□□□□ 0.9
SHCBP1LQ9BZQ2 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SHCBP1LQ9BZQ2 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.65■□□□□ 0.9
SHCBP1LQ9BZQ2 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SHCBP1LQ9BZQ2 PCDHAC2-203ENST00000615316 3011 ntBASIC20.65■□□□□ 0.9
SHCBP1LQ9BZQ2 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SHCBP1LQ9BZQ2 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.65■□□□□ 0.9
SHCBP1LQ9BZQ2 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.65■□□□□ 0.9
SHCBP1LQ9BZQ2 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SHCBP1LQ9BZQ2 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
SHCBP1LQ9BZQ2 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SHCBP1LQ9BZQ2 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SHCBP1LQ9BZQ2 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.65■□□□□ 0.9
SHCBP1LQ9BZQ2 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SHCBP1LQ9BZQ2 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.65■□□□□ 0.9
SHCBP1LQ9BZQ2 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.65■□□□□ 0.9
SHCBP1LQ9BZQ2 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
SHCBP1LQ9BZQ2 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.65■□□□□ 0.9
SHCBP1LQ9BZQ2 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SHCBP1LQ9BZQ2 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SHCBP1LQ9BZQ2 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SHCBP1LQ9BZQ2 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SHCBP1LQ9BZQ2 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
SHCBP1LQ9BZQ2 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
SHCBP1LQ9BZQ2 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.64■□□□□ 0.9
SHCBP1LQ9BZQ2 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.64■□□□□ 0.9
SHCBP1LQ9BZQ2 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SHCBP1LQ9BZQ2 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
SHCBP1LQ9BZQ2 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.64■□□□□ 0.89
SHCBP1LQ9BZQ2 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SHCBP1LQ9BZQ2 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SHCBP1LQ9BZQ2 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.64■□□□□ 0.89
SHCBP1LQ9BZQ2 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SHCBP1LQ9BZQ2 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SHCBP1LQ9BZQ2 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
SHCBP1LQ9BZQ2 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
SHCBP1LQ9BZQ2 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.64■□□□□ 0.89
SHCBP1LQ9BZQ2 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SHCBP1LQ9BZQ2 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SHCBP1LQ9BZQ2 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SHCBP1LQ9BZQ2 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.64■□□□□ 0.89
SHCBP1LQ9BZQ2 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SHCBP1LQ9BZQ2 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.64■□□□□ 0.89
SHCBP1LQ9BZQ2 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SHCBP1LQ9BZQ2 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
SHCBP1LQ9BZQ2 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SHCBP1LQ9BZQ2 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SHCBP1LQ9BZQ2 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
SHCBP1LQ9BZQ2 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms