Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.91■■□□□ 1.1
RFX6Q8HWS3 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.91■■□□□ 1.1
RFX6Q8HWS3 AC005224.4-201ENST00000583262 1652 ntBASIC21.91■■□□□ 1.1
RFX6Q8HWS3 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RFX6Q8HWS3 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.9■■□□□ 1.1
RFX6Q8HWS3 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
RFX6Q8HWS3 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RFX6Q8HWS3 AC055733.4-201ENST00000638462 1354 ntBASIC21.9■■□□□ 1.1
RFX6Q8HWS3 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
RFX6Q8HWS3 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RFX6Q8HWS3 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RFX6Q8HWS3 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RFX6Q8HWS3 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RFX6Q8HWS3 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RFX6Q8HWS3 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RFX6Q8HWS3 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RFX6Q8HWS3 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.9■■□□□ 1.1
RFX6Q8HWS3 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RFX6Q8HWS3 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RFX6Q8HWS3 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
RFX6Q8HWS3 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RFX6Q8HWS3 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RFX6Q8HWS3 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RFX6Q8HWS3 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
RFX6Q8HWS3 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RFX6Q8HWS3 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
RFX6Q8HWS3 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
RFX6Q8HWS3 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.89■■□□□ 1.1
RFX6Q8HWS3 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.89■■□□□ 1.1
RFX6Q8HWS3 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RFX6Q8HWS3 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RFX6Q8HWS3 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.89■■□□□ 1.09
RFX6Q8HWS3 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.89■■□□□ 1.09
RFX6Q8HWS3 AC142381.2-201ENST00000566120 298 ntBASIC21.89■■□□□ 1.09
RFX6Q8HWS3 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RFX6Q8HWS3 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.89■■□□□ 1.09
RFX6Q8HWS3 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.89■■□□□ 1.09
RFX6Q8HWS3 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
RFX6Q8HWS3 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RFX6Q8HWS3 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.88■■□□□ 1.09
RFX6Q8HWS3 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
RFX6Q8HWS3 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
RFX6Q8HWS3 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.88■■□□□ 1.09
RFX6Q8HWS3 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.88■■□□□ 1.09
RFX6Q8HWS3 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RFX6Q8HWS3 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RFX6Q8HWS3 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RFX6Q8HWS3 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.88■■□□□ 1.09
RFX6Q8HWS3 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RFX6Q8HWS3 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RFX6Q8HWS3 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
RFX6Q8HWS3 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
RFX6Q8HWS3 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RFX6Q8HWS3 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RFX6Q8HWS3 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
RFX6Q8HWS3 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
RFX6Q8HWS3 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
RFX6Q8HWS3 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RFX6Q8HWS3 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
RFX6Q8HWS3 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RFX6Q8HWS3 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RFX6Q8HWS3 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.87■■□□□ 1.09
RFX6Q8HWS3 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RFX6Q8HWS3 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RFX6Q8HWS3 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
RFX6Q8HWS3 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RFX6Q8HWS3 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RFX6Q8HWS3 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
RFX6Q8HWS3 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RFX6Q8HWS3 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RFX6Q8HWS3 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RFX6Q8HWS3 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.86■■□□□ 1.09
RFX6Q8HWS3 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RFX6Q8HWS3 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RFX6Q8HWS3 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.86■■□□□ 1.09
RFX6Q8HWS3 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.86■■□□□ 1.09
RFX6Q8HWS3 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
RFX6Q8HWS3 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RFX6Q8HWS3 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
RFX6Q8HWS3 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RFX6Q8HWS3 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.85■■□□□ 1.09
RFX6Q8HWS3 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.85■■□□□ 1.09
RFX6Q8HWS3 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RFX6Q8HWS3 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.85■■□□□ 1.09
RFX6Q8HWS3 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.85■■□□□ 1.09
RFX6Q8HWS3 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.85■■□□□ 1.09
RFX6Q8HWS3 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RFX6Q8HWS3 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
RFX6Q8HWS3 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.85■■□□□ 1.09
RFX6Q8HWS3 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RFX6Q8HWS3 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RFX6Q8HWS3 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RFX6Q8HWS3 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.84■■□□□ 1.09
RFX6Q8HWS3 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.84■■□□□ 1.09
RFX6Q8HWS3 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.84■■□□□ 1.09
RFX6Q8HWS3 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RFX6Q8HWS3 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
RFX6Q8HWS3 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RFX6Q8HWS3 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RFX6Q8HWS3 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms