Protein–RNA interactions for Protein: O60869

EDF1, Endothelial differentiation-related factor 1, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EDF1O60869 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
EDF1O60869 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
EDF1O60869 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
EDF1O60869 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
EDF1O60869 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.77■□□□□ 0.92
EDF1O60869 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
EDF1O60869 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
EDF1O60869 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
EDF1O60869 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
EDF1O60869 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.77■□□□□ 0.92
EDF1O60869 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.77■□□□□ 0.92
EDF1O60869 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.77■□□□□ 0.92
EDF1O60869 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
EDF1O60869 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
EDF1O60869 AC133637.1-201ENST00000624115 1537 ntBASIC20.77■□□□□ 0.92
EDF1O60869 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
EDF1O60869 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
EDF1O60869 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.91
EDF1O60869 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
EDF1O60869 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
EDF1O60869 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.77■□□□□ 0.91
EDF1O60869 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
EDF1O60869 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.76■□□□□ 0.91
EDF1O60869 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
EDF1O60869 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
EDF1O60869 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.76■□□□□ 0.91
EDF1O60869 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
EDF1O60869 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.76■□□□□ 0.91
EDF1O60869 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.76■□□□□ 0.91
EDF1O60869 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.76■□□□□ 0.91
EDF1O60869 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.76■□□□□ 0.91
EDF1O60869 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.76■□□□□ 0.91
EDF1O60869 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
EDF1O60869 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
EDF1O60869 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
EDF1O60869 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
EDF1O60869 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.75■□□□□ 0.91
EDF1O60869 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
EDF1O60869 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
EDF1O60869 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.75■□□□□ 0.91
EDF1O60869 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
EDF1O60869 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
EDF1O60869 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.75■□□□□ 0.91
EDF1O60869 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
EDF1O60869 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
EDF1O60869 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.75■□□□□ 0.91
EDF1O60869 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.75■□□□□ 0.91
EDF1O60869 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.75■□□□□ 0.91
EDF1O60869 Z92544.1-202ENST00000571933 1220 ntBASIC20.75■□□□□ 0.91
EDF1O60869 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
EDF1O60869 AC068587.7-201ENST00000641602 218 ntBASIC20.75■□□□□ 0.91
EDF1O60869 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
EDF1O60869 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
EDF1O60869 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.75■□□□□ 0.91
EDF1O60869 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
EDF1O60869 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
EDF1O60869 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
EDF1O60869 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
EDF1O60869 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
EDF1O60869 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
EDF1O60869 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.74■□□□□ 0.91
EDF1O60869 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
EDF1O60869 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
EDF1O60869 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
EDF1O60869 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
EDF1O60869 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
EDF1O60869 AC020907.5-201ENST00000624372 1936 ntBASIC20.74■□□□□ 0.91
EDF1O60869 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
EDF1O60869 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
EDF1O60869 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EDF1O60869 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
EDF1O60869 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.73■□□□□ 0.91
EDF1O60869 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EDF1O60869 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EDF1O60869 KRT8P33-201ENST00000508125 1423 ntBASIC20.73■□□□□ 0.91
EDF1O60869 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
EDF1O60869 YBX1P4-201ENST00000392794 808 ntBASIC20.73■□□□□ 0.91
EDF1O60869 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.73■□□□□ 0.91
EDF1O60869 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.73■□□□□ 0.91
EDF1O60869 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.73■□□□□ 0.91
EDF1O60869 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.73■□□□□ 0.91
EDF1O60869 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
EDF1O60869 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EDF1O60869 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EDF1O60869 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EDF1O60869 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EDF1O60869 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EDF1O60869 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EDF1O60869 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EDF1O60869 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EDF1O60869 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.73■□□□□ 0.91
EDF1O60869 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EDF1O60869 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
EDF1O60869 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.72■□□□□ 0.91
EDF1O60869 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
EDF1O60869 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
EDF1O60869 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
EDF1O60869 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
EDF1O60869 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
EDF1O60869 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms