Protein–RNA interactions for Protein: Q99470

SDF2, Stromal cell-derived factor 2, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2Q99470 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SDF2Q99470 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.57■□□□□ 0.72
SDF2Q99470 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SDF2Q99470 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
SDF2Q99470 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SDF2Q99470 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
SDF2Q99470 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SDF2Q99470 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SDF2Q99470 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
SDF2Q99470 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SDF2Q99470 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
SDF2Q99470 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.56■□□□□ 0.72
SDF2Q99470 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.56■□□□□ 0.72
SDF2Q99470 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SDF2Q99470 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SDF2Q99470 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.56■□□□□ 0.72
SDF2Q99470 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SDF2Q99470 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.56■□□□□ 0.72
SDF2Q99470 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.56■□□□□ 0.72
SDF2Q99470 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.56■□□□□ 0.72
SDF2Q99470 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SDF2Q99470 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
SDF2Q99470 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.55■□□□□ 0.72
SDF2Q99470 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.55■□□□□ 0.72
SDF2Q99470 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SDF2Q99470 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.55■□□□□ 0.72
SDF2Q99470 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
SDF2Q99470 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SDF2Q99470 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.55■□□□□ 0.72
SDF2Q99470 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.55■□□□□ 0.72
SDF2Q99470 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.55■□□□□ 0.72
SDF2Q99470 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.55■□□□□ 0.72
SDF2Q99470 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.55■□□□□ 0.72
SDF2Q99470 MIR6084-201ENST00000622012 110 ntBASIC19.55■□□□□ 0.72
SDF2Q99470 PKD1P6-201ENST00000343738 4769 ntBASIC19.55■□□□□ 0.72
SDF2Q99470 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SDF2Q99470 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SDF2Q99470 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.55■□□□□ 0.72
SDF2Q99470 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
SDF2Q99470 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.55■□□□□ 0.72
SDF2Q99470 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SDF2Q99470 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SDF2Q99470 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
SDF2Q99470 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.54■□□□□ 0.72
SDF2Q99470 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SDF2Q99470 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SDF2Q99470 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SDF2Q99470 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
SDF2Q99470 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.54■□□□□ 0.72
SDF2Q99470 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SDF2Q99470 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SDF2Q99470 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
SDF2Q99470 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SDF2Q99470 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
SDF2Q99470 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.54■□□□□ 0.72
SDF2Q99470 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SDF2Q99470 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
SDF2Q99470 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.54■□□□□ 0.72
SDF2Q99470 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.54■□□□□ 0.72
SDF2Q99470 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.54■□□□□ 0.72
SDF2Q99470 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SDF2Q99470 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SDF2Q99470 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SDF2Q99470 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SDF2Q99470 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
SDF2Q99470 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SDF2Q99470 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SDF2Q99470 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.53■□□□□ 0.72
SDF2Q99470 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.53■□□□□ 0.72
SDF2Q99470 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.53■□□□□ 0.72
SDF2Q99470 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
SDF2Q99470 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.53■□□□□ 0.72
SDF2Q99470 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.53■□□□□ 0.72
SDF2Q99470 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.53■□□□□ 0.72
SDF2Q99470 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SDF2Q99470 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.53■□□□□ 0.72
SDF2Q99470 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SDF2Q99470 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SDF2Q99470 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.53■□□□□ 0.72
SDF2Q99470 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.53■□□□□ 0.72
SDF2Q99470 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SDF2Q99470 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SDF2Q99470 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SDF2Q99470 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SDF2Q99470 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.52■□□□□ 0.72
SDF2Q99470 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SDF2Q99470 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SDF2Q99470 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SDF2Q99470 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SDF2Q99470 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SDF2Q99470 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.52■□□□□ 0.72
SDF2Q99470 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.52■□□□□ 0.72
SDF2Q99470 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
SDF2Q99470 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.52■□□□□ 0.72
SDF2Q99470 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SDF2Q99470 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.52■□□□□ 0.72
SDF2Q99470 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SDF2Q99470 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
SDF2Q99470 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SDF2Q99470 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms