Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TTC9CQ8N5M4 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC16.7■□□□□ 0.26
TTC9CQ8N5M4 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TTC9CQ8N5M4 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TTC9CQ8N5M4 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC16.7■□□□□ 0.26
TTC9CQ8N5M4 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TTC9CQ8N5M4 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TTC9CQ8N5M4 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC16.7■□□□□ 0.26
TTC9CQ8N5M4 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TTC9CQ8N5M4 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TTC9CQ8N5M4 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TTC9CQ8N5M4 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TTC9CQ8N5M4 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TTC9CQ8N5M4 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
TTC9CQ8N5M4 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TTC9CQ8N5M4 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TTC9CQ8N5M4 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC16.69■□□□□ 0.26
TTC9CQ8N5M4 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TTC9CQ8N5M4 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TTC9CQ8N5M4 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TTC9CQ8N5M4 NME4-202ENST00000382940 766 ntTSL 3 BASIC16.69■□□□□ 0.26
TTC9CQ8N5M4 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC16.69■□□□□ 0.26
TTC9CQ8N5M4 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TTC9CQ8N5M4 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC16.69■□□□□ 0.26
TTC9CQ8N5M4 NME4-211ENST00000620944 1193 ntTSL 2 BASIC16.69■□□□□ 0.26
TTC9CQ8N5M4 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC16.69■□□□□ 0.26
TTC9CQ8N5M4 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TTC9CQ8N5M4 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
TTC9CQ8N5M4 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC16.69■□□□□ 0.26
TTC9CQ8N5M4 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TTC9CQ8N5M4 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TTC9CQ8N5M4 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC16.69■□□□□ 0.26
TTC9CQ8N5M4 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TTC9CQ8N5M4 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TTC9CQ8N5M4 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC16.69■□□□□ 0.26
TTC9CQ8N5M4 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC16.69■□□□□ 0.26
TTC9CQ8N5M4 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
TTC9CQ8N5M4 AC026310.3-201ENST00000625186 2373 ntBASIC16.69■□□□□ 0.26
TTC9CQ8N5M4 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TTC9CQ8N5M4 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
TTC9CQ8N5M4 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TTC9CQ8N5M4 AC007375.3-201ENST00000600936 2314 ntBASIC16.68■□□□□ 0.26
TTC9CQ8N5M4 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
TTC9CQ8N5M4 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC16.68■□□□□ 0.26
TTC9CQ8N5M4 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TTC9CQ8N5M4 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TTC9CQ8N5M4 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TTC9CQ8N5M4 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TTC9CQ8N5M4 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC16.68■□□□□ 0.26
TTC9CQ8N5M4 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TTC9CQ8N5M4 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC16.68■□□□□ 0.26
TTC9CQ8N5M4 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TTC9CQ8N5M4 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TTC9CQ8N5M4 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TTC9CQ8N5M4 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
TTC9CQ8N5M4 AL024507.2-201ENST00000606070 2574 ntBASIC16.68■□□□□ 0.26
TTC9CQ8N5M4 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TTC9CQ8N5M4 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TTC9CQ8N5M4 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
TTC9CQ8N5M4 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TTC9CQ8N5M4 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TTC9CQ8N5M4 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC16.67■□□□□ 0.26
TTC9CQ8N5M4 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC16.67■□□□□ 0.26
TTC9CQ8N5M4 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC16.67■□□□□ 0.26
TTC9CQ8N5M4 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC16.67■□□□□ 0.26
TTC9CQ8N5M4 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TTC9CQ8N5M4 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TTC9CQ8N5M4 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
TTC9CQ8N5M4 NT5C3AP1-201ENST00000394500 1012 ntBASIC16.67■□□□□ 0.26
TTC9CQ8N5M4 MTURN-203ENST00000409688 843 ntTSL 2 BASIC16.67■□□□□ 0.26
TTC9CQ8N5M4 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TTC9CQ8N5M4 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TTC9CQ8N5M4 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC16.67■□□□□ 0.26
TTC9CQ8N5M4 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC16.67■□□□□ 0.26
TTC9CQ8N5M4 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC16.67■□□□□ 0.26
TTC9CQ8N5M4 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TTC9CQ8N5M4 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
TTC9CQ8N5M4 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TTC9CQ8N5M4 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC16.67■□□□□ 0.26
TTC9CQ8N5M4 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC16.67■□□□□ 0.26
TTC9CQ8N5M4 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TTC9CQ8N5M4 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TTC9CQ8N5M4 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC16.66■□□□□ 0.26
TTC9CQ8N5M4 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TTC9CQ8N5M4 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TTC9CQ8N5M4 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
TTC9CQ8N5M4 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TTC9CQ8N5M4 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TTC9CQ8N5M4 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC16.66■□□□□ 0.26
TTC9CQ8N5M4 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TTC9CQ8N5M4 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TTC9CQ8N5M4 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TTC9CQ8N5M4 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TTC9CQ8N5M4 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TTC9CQ8N5M4 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC16.66■□□□□ 0.26
TTC9CQ8N5M4 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC16.66■□□□□ 0.26
TTC9CQ8N5M4 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC16.66■□□□□ 0.26
TTC9CQ8N5M4 TPRG1LP1-201ENST00000598702 760 ntBASIC16.66■□□□□ 0.26
TTC9CQ8N5M4 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
TTC9CQ8N5M4 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms