Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 TBCB-214ENST00000629269 413 ntTSL 5 BASIC21.02■□□□□ 0.96
CAPNS1P04632 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CAPNS1P04632 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CAPNS1P04632 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CAPNS1P04632 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CAPNS1P04632 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
CAPNS1P04632 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.95
CAPNS1P04632 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
CAPNS1P04632 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
CAPNS1P04632 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
CAPNS1P04632 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CAPNS1P04632 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CAPNS1P04632 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CAPNS1P04632 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.01■□□□□ 0.95
CAPNS1P04632 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.01■□□□□ 0.95
CAPNS1P04632 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.01■□□□□ 0.95
CAPNS1P04632 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CAPNS1P04632 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.01■□□□□ 0.95
CAPNS1P04632 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.01■□□□□ 0.95
CAPNS1P04632 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.01■□□□□ 0.95
CAPNS1P04632 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
CAPNS1P04632 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CAPNS1P04632 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CAPNS1P04632 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CAPNS1P04632 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CAPNS1P04632 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.01■□□□□ 0.95
CAPNS1P04632 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CAPNS1P04632 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.01■□□□□ 0.95
CAPNS1P04632 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CAPNS1P04632 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CAPNS1P04632 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CAPNS1P04632 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
CAPNS1P04632 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CAPNS1P04632 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21■□□□□ 0.95
CAPNS1P04632 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CAPNS1P04632 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21■□□□□ 0.95
CAPNS1P04632 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
CAPNS1P04632 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21■□□□□ 0.95
CAPNS1P04632 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC21■□□□□ 0.95
CAPNS1P04632 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CAPNS1P04632 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CAPNS1P04632 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21■□□□□ 0.95
CAPNS1P04632 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CAPNS1P04632 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CAPNS1P04632 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21■□□□□ 0.95
CAPNS1P04632 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
CAPNS1P04632 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CAPNS1P04632 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CAPNS1P04632 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CAPNS1P04632 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
CAPNS1P04632 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CAPNS1P04632 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CAPNS1P04632 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CAPNS1P04632 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CAPNS1P04632 POU5F1P3-201ENST00000428824 1078 ntBASIC20.99■□□□□ 0.95
CAPNS1P04632 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC20.99■□□□□ 0.95
CAPNS1P04632 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.99■□□□□ 0.95
CAPNS1P04632 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
CAPNS1P04632 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CAPNS1P04632 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CAPNS1P04632 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CAPNS1P04632 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CAPNS1P04632 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CAPNS1P04632 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CAPNS1P04632 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CAPNS1P04632 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
CAPNS1P04632 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CAPNS1P04632 PRORSD1P-201ENST00000295112 541 ntBASIC20.98■□□□□ 0.95
CAPNS1P04632 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CAPNS1P04632 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.98■□□□□ 0.95
CAPNS1P04632 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CAPNS1P04632 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.98■□□□□ 0.95
CAPNS1P04632 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CAPNS1P04632 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.98■□□□□ 0.95
CAPNS1P04632 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.98■□□□□ 0.95
CAPNS1P04632 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CAPNS1P04632 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CAPNS1P04632 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.97■□□□□ 0.95
CAPNS1P04632 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.97■□□□□ 0.95
CAPNS1P04632 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.97■□□□□ 0.95
CAPNS1P04632 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.97■□□□□ 0.95
CAPNS1P04632 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CAPNS1P04632 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.97■□□□□ 0.95
CAPNS1P04632 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CAPNS1P04632 AC080038.3-201ENST00000623346 1952 ntBASIC20.97■□□□□ 0.95
CAPNS1P04632 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CAPNS1P04632 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CAPNS1P04632 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.97■□□□□ 0.95
CAPNS1P04632 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CAPNS1P04632 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CAPNS1P04632 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CAPNS1P04632 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CAPNS1P04632 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CAPNS1P04632 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CAPNS1P04632 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.96■□□□□ 0.95
CAPNS1P04632 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CAPNS1P04632 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.96■□□□□ 0.95
CAPNS1P04632 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
CAPNS1P04632 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CAPNS1P04632 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms