Protein–RNA interactions for Protein: O00571

DDX3X, ATP-dependent RNA helicase DDX3X, humanhuman

Known RBP eCLIP

Length 662 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX3XO00571 LANCL1-203ENST00000431941 1270 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.832e-6■□□□□ 9.2
DDX3XO00571 LANCL1-201ENST00000233714 1647 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.922e-6■□□□□ 9.2
DDX3XO00571 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.562e-6■□□□□ 9.2
DDX3XO00571 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.711e-14■□□□□ 9.2
DDX3XO00571 NEMP1-204ENST00000554340 1381 ntTSL 1 (best)20.63■□□□□ 0.892e-15■□□□□ 9.2
DDX3XO00571 TBCA-202ENST00000380377 683 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.532e-15■□□□□ 9.2
DDX3XO00571 TBCA-201ENST00000306388 2301 ntTSL 2 BASIC10.25□□□□□ -0.772e-15■□□□□ 9.2
DDX3XO00571 NEMP1-202ENST00000379391 5370 ntTSL 1 (best) BASIC10.18□□□□□ -0.782e-15■□□□□ 9.2
DDX3XO00571 NEMP1-203ENST00000553654 458 ntTSL 510.13□□□□□ -0.792e-15■□□□□ 9.2
DDX3XO00571 TBCA-208ENST00000520361 446 ntTSL 2 BASIC9.66□□□□□ -0.862e-15■□□□□ 9.2
DDX3XO00571 NEMP1-201ENST00000300128 5590 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.012e-15■□□□□ 9.2
DDX3XO00571 TBCA-209ENST00000522370 435 ntTSL 3 BASIC7.14□□□□□ -1.272e-15■□□□□ 9.2
DDX3XO00571 CLIC2-203ENST00000465553 902 ntTSL 35.96□□□□□ -1.462e-15■□□□□ 9.2
DDX3XO00571 TBCA-206ENST00000518338 551 ntTSL 2 BASIC5.91□□□□□ -1.462e-15■□□□□ 9.2
DDX3XO00571 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.61□□□□□ -1.512e-15■□□□□ 9.2
DDX3XO00571 C7orf49-210ENST00000486115 578 ntTSL 219.02■□□□□ 0.643e-7■□□□□ 9.2
DDX3XO00571 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -02e-10■□□□□ 9.2
DDX3XO00571 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.132e-10■□□□□ 9.2
DDX3XO00571 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.192e-10■□□□□ 9.2
DDX3XO00571 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC16.2■□□□□ 0.188e-8■□□□□ 9.2
DDX3XO00571 KYAT3-204ENST00000446900 1937 ntTSL 53.74□□□□□ -1.817e-7■□□□□ 9.1
DDX3XO00571 ASPSCR1-210ENST00000581608 2387 ntTSL 222.45■■□□□ 1.184e-6■□□□□ 9.1
DDX3XO00571 TMEM129-204ENST00000476253 958 ntTSL 218.52■□□□□ 0.564e-6■□□□□ 9.1
DDX3XO00571 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.554e-6■□□□□ 9.1
DDX3XO00571 ASPSCR1-221ENST00000585274 984 ntTSL 518.35■□□□□ 0.534e-6■□□□□ 9.1
DDX3XO00571 ASPSCR1-204ENST00000577733 5503 ntTSL 217.3■□□□□ 0.364e-6■□□□□ 9.1
DDX3XO00571 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.324e-6■□□□□ 9.1
DDX3XO00571 ASPSCR1-214ENST00000582404 534 ntTSL 317.06■□□□□ 0.324e-6■□□□□ 9.1
DDX3XO00571 ASPSCR1-218ENST00000583744 539 ntTSL 415.7■□□□□ 0.14e-6■□□□□ 9.1
DDX3XO00571 CEP250-207ENST00000425934 2156 ntTSL 515.58■□□□□ 0.084e-6■□□□□ 9.1
DDX3XO00571 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.034e-6■□□□□ 9.1
DDX3XO00571 CAPN15-206ENST00000568402 540 ntTSL 414.87□□□□□ -0.034e-6■□□□□ 9.1
DDX3XO00571 ASPSCR1-206ENST00000578361 590 ntTSL 214.85□□□□□ -0.034e-6■□□□□ 9.1
DDX3XO00571 ASPSCR1-205ENST00000578236 3277 ntTSL 214.51□□□□□ -0.094e-6■□□□□ 9.1
DDX3XO00571 ASPSCR1-217ENST00000583693 3976 ntTSL 213.84□□□□□ -0.194e-6■□□□□ 9.1
DDX3XO00571 ASPSCR1-215ENST00000583142 532 ntTSL 311.21□□□□□ -0.614e-6■□□□□ 9.1
DDX3XO00571 PPP2R2D-202ENST00000470416 6203 ntTSL 1 (best)10.79□□□□□ -0.684e-6■□□□□ 9.1
DDX3XO00571 WFS1-205ENST00000507765 3655 ntTSL 210.19□□□□□ -0.784e-6■□□□□ 9.1
DDX3XO00571 MAP4K5-204ENST00000554273 484 ntTSL 324.43■■□□□ 1.54e-12■□□□□ 9.1
DDX3XO00571 MAP4K5-209ENST00000557390 545 ntTSL 317.45■□□□□ 0.384e-12■□□□□ 9.1
DDX3XO00571 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.264e-12■□□□□ 9.1
DDX3XO00571 TLE3-209ENST00000557919 4294 ntTSL 515.98■□□□□ 0.154e-12■□□□□ 9.1
DDX3XO00571 MAP4K5-206ENST00000555216 592 ntTSL 44.77□□□□□ -1.654e-12■□□□□ 9.1
DDX3XO00571 GDI1-215ENST00000630693 786 ntTSL 4 BASIC25.99■■□□□ 1.752e-7■□□□□ 9.1
DDX3XO00571 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.552e-7■□□□□ 9.1
DDX3XO00571 GDI1-211ENST00000481304 1014 ntTSL 1 (best)16.69■□□□□ 0.262e-7■□□□□ 9.1
DDX3XO00571 GDI1-202ENST00000434049 816 ntTSL 515.49■□□□□ 0.072e-7■□□□□ 9.1
DDX3XO00571 GDI1-203ENST00000445564 568 ntTSL 415.49■□□□□ 0.072e-7■□□□□ 9.1
DDX3XO00571 GDI1-209ENST00000475976 600 ntTSL 215.49■□□□□ 0.072e-7■□□□□ 9.1
DDX3XO00571 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC13.78□□□□□ -0.21e-6■□□□□ 9.1
DDX3XO00571 GDI1-201ENST00000415109 560 ntTSL 413.3□□□□□ -0.282e-7■□□□□ 9.1
DDX3XO00571 RPL31-211ENST00000456292 357 ntTSL 26.11□□□□□ -1.431e-6■□□□□ 9.1
DDX3XO00571 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.214e-10■□□□□ 9.1
DDX3XO00571 DENND5A-211ENST00000530780 611 ntTSL 321.18■□□□□ 0.984e-10■□□□□ 9.1
DDX3XO00571 DENND5A-205ENST00000526707 2861 ntTSL 220.64■□□□□ 0.894e-10■□□□□ 9.1
DDX3XO00571 DENND5A-210ENST00000530044 4060 ntTSL 2 BASIC11.58□□□□□ -0.564e-10■□□□□ 9.1
DDX3XO00571 SSBP1-210ENST00000481508 989 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.641e-34■□□□□ 9.1
DDX3XO00571 SSBP1-209ENST00000473783 470 ntTSL 59.99□□□□□ -0.811e-34■□□□□ 9.1
DDX3XO00571 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.491e-34■□□□□ 9.1
DDX3XO00571 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.182e-43■□□□□ 9.1
DDX3XO00571 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.072e-43■□□□□ 9.1
DDX3XO00571 EHBP1-214ENST00000467436 538 ntTSL 412.67□□□□□ -0.381e-20■□□□□ 9.1
DDX3XO00571 TARS-203ENST00000502508 552 ntTSL 516.07■□□□□ 0.165e-50■□□□□ 9.1
DDX3XO00571 TARS-213ENST00000513066 656 ntTSL 310.78□□□□□ -0.685e-50■□□□□ 9.1
DDX3XO00571 TARS-210ENST00000508361 2481 ntTSL 210.57□□□□□ -0.725e-50■□□□□ 9.1
DDX3XO00571 TARS-202ENST00000455217 2523 ntTSL 2 BASIC10.22□□□□□ -0.775e-50■□□□□ 9.1
DDX3XO00571 TARS-216ENST00000627006 171 ntTSL 5 BASIC10.17□□□□□ -0.785e-50■□□□□ 9.1
DDX3XO00571 TARS-204ENST00000502553 2534 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.785e-50■□□□□ 9.1
DDX3XO00571 TARS-212ENST00000509731 2170 ntTSL 1 (best)9.5□□□□□ -0.895e-50■□□□□ 9.1
DDX3XO00571 TARS-207ENST00000505012 608 ntTSL 49.23□□□□□ -0.935e-50■□□□□ 9.1
DDX3XO00571 TARS-201ENST00000265112 4314 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.975e-50■□□□□ 9.1
DDX3XO00571 TARS-209ENST00000507716 2475 ntTSL 28.63□□□□□ -1.035e-50■□□□□ 9.1
DDX3XO00571 TARS-214ENST00000514259 466 ntTSL 44.97□□□□□ -1.615e-50■□□□□ 9.1
DDX3XO00571 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.33□□□□□ -2.625e-50■□□□□ 9.1
DDX3XO00571 AP3D1-211ENST00000591650 1437 ntTSL 1 (best)18.23■□□□□ 0.513e-7■□□□□ 9.1
DDX3XO00571 AP3D1-203ENST00000585652 4433 ntTSL 213.83□□□□□ -0.23e-7■□□□□ 9.1
DDX3XO00571 AP3D1-206ENST00000589223 3357 ntTSL 213.09□□□□□ -0.313e-7■□□□□ 9.1
DDX3XO00571 AP3D1-205ENST00000586370 911 ntTSL 27.17□□□□□ -1.263e-7■□□□□ 9.1
DDX3XO00571 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.696e-9■□□□□ 9.1
DDX3XO00571 RPS3-213ENST00000529285 550 ntTSL 521.51■■□□□ 1.035e-10■□□□□ 9.1
DDX3XO00571 RPS3-204ENST00000525690 421 ntTSL 310.77□□□□□ -0.695e-10■□□□□ 9.1
DDX3XO00571 RPS3-215ENST00000530170 531 ntTSL 59.95□□□□□ -0.825e-10■□□□□ 9.1
DDX3XO00571 RPS3-205ENST00000525933 1307 ntTSL 59.85□□□□□ -0.835e-10■□□□□ 9.1
DDX3XO00571 VPS52-214ENST00000463486 925 ntTSL 518.38■□□□□ 0.539e-9■□□□□ 9.1
DDX3XO00571 VPS52-215ENST00000464425 1060 ntTSL 517.63■□□□□ 0.419e-9■□□□□ 9.1
DDX3XO00571 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.239e-9■□□□□ 9.1
DDX3XO00571 PRPS2-201ENST00000380663 584 ntTSL 415.57■□□□□ 0.089e-9■□□□□ 9.1
DDX3XO00571 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.57■□□□□ 0.089e-9■□□□□ 9.1
DDX3XO00571 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.019e-9■□□□□ 9.1
DDX3XO00571 ZBTB48-207ENST00000488936 784 ntTSL 314.93□□□□□ -0.021e-12■□□□□ 9.1
DDX3XO00571 ADIPOR2-205ENST00000540974 480 ntTSL 314.85□□□□□ -0.039e-9■□□□□ 9.1
DDX3XO00571 WDR66-202ENST00000397454 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.119e-9■□□□□ 9.1
DDX3XO00571 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.199e-9■□□□□ 9.1
DDX3XO00571 PRPS2-202ENST00000380668 2511 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.29e-9■□□□□ 9.1
DDX3XO00571 VPS52-218ENST00000482399 3338 ntTSL 2 BASIC13.75□□□□□ -0.219e-9■□□□□ 9.1
DDX3XO00571 SNAPC5-206ENST00000565465 1069 ntTSL 213.19□□□□□ -0.39e-9■□□□□ 9.1
DDX3XO00571 ANAPC13-202ENST00000503439 574 ntTSL 213□□□□□ -0.339e-9■□□□□ 9.1
DDX3XO00571 SNAPC5-203ENST00000395589 749 ntAPPRIS P2 TSL 2 BASIC12.98□□□□□ -0.339e-9■□□□□ 9.1
DDX3XO00571 SNAPC5-205ENST00000563480 920 ntAPPRIS P2 TSL 2 BASIC12.98□□□□□ -0.339e-9■□□□□ 9.1
DDX3XO00571 ELP1-204ENST00000537196 3823 ntTSL 1 (best) BASIC12.82□□□□□ -0.361e-25■□□□□ 9.1
Retrieved 100 of 47,714 protein–RNA pairs in 3843.5 ms