RNA–Protein interactions for RNA: ENST00000563480.6

SNAPC5-205, Transcript of small nuclear RNA activating complex polypeptide 5, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SNAPC5, Length 920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC5-205ENST00000563480 NISCHQ9Y2I1 1504 aa30.31■■■□□ 2.44
SNAPC5-205ENST00000563480 CCDC180Q9P1Z9 1646 aa26.86■■□□□ 1.89
SNAPC5-205ENST00000563480 ABCC9O60706 1549 aa26.31■■□□□ 1.8
SNAPC5-205ENST00000563480 DCAF8L2P0C7V8 631 aa25.33■■□□□ 1.65
SNAPC5-205ENST00000563480 RB1CC1Q8TDY2 1594 aa25.27■■□□□ 1.64
SNAPC5-205ENST00000563480 NACADO15069 1562 aa25.27■■□□□ 1.64
SNAPC5-205ENST00000563480 ZCCHC6Q5VYS8 1495 aaKnown RBP25.23■■□□□ 1.63
SNAPC5-205ENST00000563480 MYO15BQ96JP2 1530 aa25.15■■□□□ 1.62
SNAPC5-205ENST00000563480 DCAF1Q9Y4B6 1507 aa25.06■■□□□ 1.6
SNAPC5-205ENST00000563480 UNC13AQ9UPW8 1703 aa24.72■■□□□ 1.55
SNAPC5-205ENST00000563480 PABPN1Q86U42 306 aaKnown RBP eCLIP24.63■■□□□ 1.53
SNAPC5-205ENST00000563480 BICRAQ9NZM4 1560 aa24.57■■□□□ 1.52
SNAPC5-205ENST00000563480 SCRIBQ14160 1630 aa24.53■■□□□ 1.52
SNAPC5-205ENST00000563480 DNAJC5BQ9UF47 199 aa24.32■■□□□ 1.48
SNAPC5-205ENST00000563480 SHROOM4Q9ULL8 1493 aa24.24■■□□□ 1.47
SNAPC5-205ENST00000563480 EIF4G1Q04637 1599 aaKnown RBP23.88■■□□□ 1.41
SNAPC5-205ENST00000563480 CC2D2AQ9P2K1 1620 aa23.78■■□□□ 1.4
SNAPC5-205ENST00000563480 CECR2Q9BXF3 1484 aa23.65■■□□□ 1.38
SNAPC5-205ENST00000563480 SMARCA4P51532 1647 aa23.48■■□□□ 1.35
SNAPC5-205ENST00000563480 BAZ1AQ9NRL2 1556 aaPredicted RBP23.45■■□□□ 1.34
SNAPC5-205ENST00000563480 MROH2BQ7Z745 1585 aa23.38■■□□□ 1.33
SNAPC5-205ENST00000563480 ATAD2BQ9ULI0 1458 aa23.37■■□□□ 1.33
SNAPC5-205ENST00000563480 NCAPD3P42695 1498 aa23.36■■□□□ 1.33
SNAPC5-205ENST00000563480 SMARCA2P51531 1590 aa23.3■■□□□ 1.32
SNAPC5-205ENST00000563480 PEG3Q9GZU2 1588 aa23.26■■□□□ 1.31
SNAPC5-205ENST00000563480 HMGXB3Q12766 1538 aa23.2■■□□□ 1.3
SNAPC5-205ENST00000563480 BAZ1BQ9UIG0 1483 aaKnown RBP23.15■■□□□ 1.3
SNAPC5-205ENST00000563480 RSF1Q96T23 1441 aaPredicted RBP23.13■■□□□ 1.29
SNAPC5-205ENST00000563480 WIZO95785 1651 aa23.1■■□□□ 1.29
SNAPC5-205ENST00000563480 TOP2AP11388 1531 aaKnown RBP22.83■■□□□ 1.25
SNAPC5-205ENST00000563480 NESP48681 1621 aa22.79■■□□□ 1.24
SNAPC5-205ENST00000563480 LAMC3Q9Y6N6 1575 aa22.69■■□□□ 1.22
SNAPC5-205ENST00000563480 CADPSQ9ULU8 1353 aa22.68■■□□□ 1.22
SNAPC5-205ENST00000563480 CCDC88BA6NC98 1476 aa22.62■■□□□ 1.21
SNAPC5-205ENST00000563480 ERCC6Q03468 1493 aa22.62■■□□□ 1.21
SNAPC5-205ENST00000563480 SUPT5HO00267 1087 aaKnown RBP22.58■■□□□ 1.21
SNAPC5-205ENST00000563480 PDS5BQ9NTI5 1447 aa22.56■■□□□ 1.2
SNAPC5-205ENST00000563480 CFTRP13569 1480 aa22.54■■□□□ 1.2
SNAPC5-205ENST00000563480 KIF21AQ7Z4S6 1674 aa22.47■■□□□ 1.19
SNAPC5-205ENST00000563480 DNAJC5Q9H3Z4 198 aa22.41■■□□□ 1.18
SNAPC5-205ENST00000563480 FANCD2Q9BXW9 1451 aa22.4■■□□□ 1.18
SNAPC5-205ENST00000563480 THOC2Q8NI27 1593 aaKnown RBP22.39■■□□□ 1.18
SNAPC5-205ENST00000563480 CUX2O14529 1486 aa22.38■■□□□ 1.17
SNAPC5-205ENST00000563480 CEP164Q9UPV0 1460 aa22.34■■□□□ 1.17
SNAPC5-205ENST00000563480 MRC2Q9UBG0 1479 aa22.31■■□□□ 1.16
SNAPC5-205ENST00000563480 PRDM2Q13029 1718 aa22.29■■□□□ 1.16
SNAPC5-205ENST00000563480 WDR62O43379 1518 aa22.23■■□□□ 1.15
SNAPC5-205ENST00000563480 URB2Q14146 1524 aaKnown RBP22.2■■□□□ 1.14
SNAPC5-205ENST00000563480 TOPBP1Q92547 1522 aa22.06■■□□□ 1.12
SNAPC5-205ENST00000563480 ABCC8Q09428 1581 aa22.03■■□□□ 1.12
SNAPC5-205ENST00000563480 DNMBPQ6XZF7 1577 aa22■■□□□ 1.11
SNAPC5-205ENST00000563480 CUX1P39880 1505 aa21.9■■□□□ 1.1
SNAPC5-205ENST00000563480 IFT140Q96RY7 1462 aa21.89■■□□□ 1.09
SNAPC5-205ENST00000563480 POLA1P09884 1462 aaPredicted RBP21.87■■□□□ 1.09
SNAPC5-205ENST00000563480 ZNF608Q9ULD9 1512 aaPredicted RBP21.82■■□□□ 1.08
SNAPC5-205ENST00000563480 FGD5Q6ZNL6 1462 aa21.82■■□□□ 1.08
SNAPC5-205ENST00000563480 TARBP1Q13395 1621 aaKnown RBP21.8■■□□□ 1.08
SNAPC5-205ENST00000563480 RAD54L2Q9Y4B4 1467 aa21.8■■□□□ 1.08
SNAPC5-205ENST00000563480 SOGA1O94964 1423 aa21.8■■□□□ 1.08
SNAPC5-205ENST00000563480 WRNQ14191 1432 aaPredicted RBP eCLIP21.78■■□□□ 1.08
SNAPC5-205ENST00000563480 SYNJ1O43426 1573 aa21.72■■□□□ 1.07
SNAPC5-205ENST00000563480 AQRO60306 1485 aaKnown RBP eCLIP21.71■■□□□ 1.07
SNAPC5-205ENST00000563480 TOP2BQ02880 1626 aa21.7■■□□□ 1.06
SNAPC5-205ENST00000563480 BIVM-ERCC5R4GMW8 1640 aa21.69■■□□□ 1.06
SNAPC5-205ENST00000563480 TDRD9Q8NDG6 1382 aaKnown RBP21.69■■□□□ 1.06
SNAPC5-205ENST00000563480 EIF4G3O43432 1585 aaKnown RBP21.68■■□□□ 1.06
SNAPC5-205ENST00000563480 ABCA10Q8WWZ4 1543 aa21.61■■□□□ 1.05
SNAPC5-205ENST00000563480 WDR97A6NE52 1622 aa21.6■■□□□ 1.05
SNAPC5-205ENST00000563480 GAPVD1Q14C86 1478 aa21.52■■□□□ 1.04
SNAPC5-205ENST00000563480 OSCARQ8IYS5 282 aa21.52■■□□□ 1.04
SNAPC5-205ENST00000563480 GRIN2BQ13224 1484 aa21.52■■□□□ 1.03
SNAPC5-205ENST00000563480 ABCA5Q8WWZ7 1642 aa21.5■■□□□ 1.03
SNAPC5-205ENST00000563480 SNAPC4Q5SXM2 1469 aa21.47■■□□□ 1.03
SNAPC5-205ENST00000563480 FBLN2P98095 1184 aa21.43■■□□□ 1.02
SNAPC5-205ENST00000563480 MAGI1Q96QZ7 1491 aaPredicted RBP21.43■■□□□ 1.02
SNAPC5-205ENST00000563480 PBRM1Q86U86 1689 aa21.43■■□□□ 1.02
SNAPC5-205ENST00000563480 TRIM41Q8WV44 630 aa21.42■■□□□ 1.02
SNAPC5-205ENST00000563480 CHD1O14646 1710 aa21.4■■□□□ 1.02
SNAPC5-205ENST00000563480 CHMP7Q8WUX9 453 aaPredicted RBP21.38■■□□□ 1.01
SNAPC5-205ENST00000563480 SYNJ2O15056 1496 aa21.36■■□□□ 1.01
SNAPC5-205ENST00000563480 ERICH3Q5RHP9 1530 aa21.33■■□□□ 1
SNAPC5-205ENST00000563480 KIF27Q86VH2 1401 aa21.3■■□□□ 1
SNAPC5-205ENST00000563480 IGF1RP08069 1367 aa21.28■■□□□ 1
SNAPC5-205ENST00000563480 FHAD1B1AJZ9 1412 aa21.28■■□□□ 1
SNAPC5-205ENST00000563480 ADAMTS12P58397 1594 aa21.27■■□□□ 1
SNAPC5-205ENST00000563480 GRIN2AQ12879 1464 aa21.23■□□□□ 0.99
SNAPC5-205ENST00000563480 CLASP1Q7Z460 1538 aa21.19■□□□□ 0.98
SNAPC5-205ENST00000563480 RUSC2Q8N2Y8 1516 aa21.19■□□□□ 0.98
SNAPC5-205ENST00000563480 NUP160Q12769 1436 aa21.15■□□□□ 0.98
SNAPC5-205ENST00000563480 CHIC1Q5VXU3 224 aa21.13■□□□□ 0.97
SNAPC5-205ENST00000563480 RIMBP3CA6NJZ7 1639 aa21.13■□□□□ 0.97
SNAPC5-205ENST00000563480 RIMBP3BA6NNM3 1639 aa21.13■□□□□ 0.97
SNAPC5-205ENST00000563480 RIMBP3Q9UFD9 1639 aa21.13■□□□□ 0.97
SNAPC5-205ENST00000563480 CEP170Q5SW79 1584 aa21.13■□□□□ 0.97
SNAPC5-205ENST00000563480 ARHGEF11O15085 1522 aa21.13■□□□□ 0.97
SNAPC5-205ENST00000563480 CARMIL1Q5VZK9 1371 aa21.12■□□□□ 0.97
SNAPC5-205ENST00000563480 CUL7Q14999 1698 aa21.12■□□□□ 0.97
SNAPC5-205ENST00000563480 CYB5RLQ6IPT4 315 aa20.98■□□□□ 0.95
SNAPC5-205ENST00000563480 JPH4Q96JJ6 628 aa20.98■□□□□ 0.95
SNAPC5-205ENST00000563480 ARAP1Q96P48 1450 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms