RNA–Protein interactions for RNA: ENST00000554340.1

NEMP1-204, Transcript of nuclear envelope integral membrane protein 1, humanhuman

TSL 1 (best)

Gene NEMP1, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEMP1-204ENST00000554340 NISCHQ9Y2I1 1504 aa51.35■■■■■ 5.81
NEMP1-204ENST00000554340 CCDC180Q9P1Z9 1646 aa46.15■■■■■ 4.98
NEMP1-204ENST00000554340 ABCC9O60706 1549 aa45.94■■■■■ 4.95
NEMP1-204ENST00000554340 RB1CC1Q8TDY2 1594 aa43.84■■■■■ 4.61
NEMP1-204ENST00000554340 NACADO15069 1562 aa43.55■■■■■ 4.56
NEMP1-204ENST00000554340 DCAF8L2P0C7V8 631 aa43.17■■■■■ 4.5
NEMP1-204ENST00000554340 MYO15BQ96JP2 1530 aa43■■■■■ 4.47
NEMP1-204ENST00000554340 DNAJC5BQ9UF47 199 aa42.98■■■■■ 4.47
NEMP1-204ENST00000554340 UNC13AQ9UPW8 1703 aa42.91■■■■■ 4.46
NEMP1-204ENST00000554340 PABPN1Q86U42 306 aaKnown RBP eCLIP42.73■■■■■ 4.43
NEMP1-204ENST00000554340 ZCCHC6Q5VYS8 1495 aaKnown RBP42.59■■■■■ 4.41
NEMP1-204ENST00000554340 BICRAQ9NZM4 1560 aa42.55■■■■■ 4.4
NEMP1-204ENST00000554340 DCAF1Q9Y4B6 1507 aa42.46■■■■■ 4.39
NEMP1-204ENST00000554340 SHROOM4Q9ULL8 1493 aa42.03■■■■■ 4.32
NEMP1-204ENST00000554340 SCRIBQ14160 1630 aa41.97■■■■■ 4.31
NEMP1-204ENST00000554340 CC2D2AQ9P2K1 1620 aa41.56■■■■■ 4.24
NEMP1-204ENST00000554340 EIF4G1Q04637 1599 aaKnown RBP41.5■■■■■ 4.23
NEMP1-204ENST00000554340 CECR2Q9BXF3 1484 aa41.4■■■■■ 4.22
NEMP1-204ENST00000554340 NCAPD3P42695 1498 aa40.17■■■■■ 4.02
NEMP1-204ENST00000554340 SMARCA4P51532 1647 aa40.08■■■■■ 4.01
NEMP1-204ENST00000554340 ATAD2BQ9ULI0 1458 aa40.05■■■■■ 4
NEMP1-204ENST00000554340 SMARCA2P51531 1590 aa39.99■■■■□ 3.99
NEMP1-204ENST00000554340 HMGXB3Q12766 1538 aa39.93■■■■□ 3.98
NEMP1-204ENST00000554340 BAZ1AQ9NRL2 1556 aaPredicted RBP39.87■■■■□ 3.97
NEMP1-204ENST00000554340 PEG3Q9GZU2 1588 aa39.71■■■■□ 3.95
NEMP1-204ENST00000554340 ERCC6Q03468 1493 aa39.68■■■■□ 3.94
NEMP1-204ENST00000554340 BAZ1BQ9UIG0 1483 aaKnown RBP39.68■■■■□ 3.94
NEMP1-204ENST00000554340 CUX2O14529 1486 aa39.63■■■■□ 3.93
NEMP1-204ENST00000554340 MROH2BQ7Z745 1585 aa39.55■■■■□ 3.92
NEMP1-204ENST00000554340 NESP48681 1621 aa39.5■■■■□ 3.91
NEMP1-204ENST00000554340 DNAJC5Q9H3Z4 198 aa39.45■■■■□ 3.91
NEMP1-204ENST00000554340 LAMC3Q9Y6N6 1575 aa39.3■■■■□ 3.88
NEMP1-204ENST00000554340 THOC2Q8NI27 1593 aaKnown RBP39.15■■■■□ 3.86
NEMP1-204ENST00000554340 WIZO95785 1651 aa39.11■■■■□ 3.85
NEMP1-204ENST00000554340 KIF21AQ7Z4S6 1674 aa39.08■■■■□ 3.85
NEMP1-204ENST00000554340 PDS5BQ9NTI5 1447 aa39.01■■■■□ 3.84
NEMP1-204ENST00000554340 CADPSQ9ULU8 1353 aa38.92■■■■□ 3.82
NEMP1-204ENST00000554340 RSF1Q96T23 1441 aaPredicted RBP38.74■■■■□ 3.79
NEMP1-204ENST00000554340 MRC2Q9UBG0 1479 aa38.7■■■■□ 3.79
NEMP1-204ENST00000554340 WDR62O43379 1518 aa38.63■■■■□ 3.77
NEMP1-204ENST00000554340 TOP2AP11388 1531 aaKnown RBP38.63■■■■□ 3.77
NEMP1-204ENST00000554340 CEP164Q9UPV0 1460 aa38.55■■■■□ 3.76
NEMP1-204ENST00000554340 CFTRP13569 1480 aa38.53■■■■□ 3.76
NEMP1-204ENST00000554340 FANCD2Q9BXW9 1451 aa38.5■■■■□ 3.75
NEMP1-204ENST00000554340 PRDM2Q13029 1718 aa38.28■■■■□ 3.72
NEMP1-204ENST00000554340 URB2Q14146 1524 aaKnown RBP38.19■■■■□ 3.7
NEMP1-204ENST00000554340 CCDC88BA6NC98 1476 aa38.15■■■■□ 3.7
NEMP1-204ENST00000554340 TOPBP1Q92547 1522 aa37.79■■■■□ 3.64
NEMP1-204ENST00000554340 IFT140Q96RY7 1462 aa37.78■■■■□ 3.64
NEMP1-204ENST00000554340 OSCARQ8IYS5 282 aa37.75■■■■□ 3.63
NEMP1-204ENST00000554340 ABCC8Q09428 1581 aa37.74■■■■□ 3.63
NEMP1-204ENST00000554340 TRIM41Q8WV44 630 aa37.7■■■■□ 3.63
NEMP1-204ENST00000554340 DNMBPQ6XZF7 1577 aa37.7■■■■□ 3.63
NEMP1-204ENST00000554340 ZNF608Q9ULD9 1512 aaPredicted RBP37.69■■■■□ 3.62
NEMP1-204ENST00000554340 EIF4G3O43432 1585 aaKnown RBP37.55■■■■□ 3.6
NEMP1-204ENST00000554340 TARBP1Q13395 1621 aaKnown RBP37.5■■■■□ 3.59
NEMP1-204ENST00000554340 POLA1P09884 1462 aaPredicted RBP37.42■■■■□ 3.58
NEMP1-204ENST00000554340 RIMBP3CA6NJZ7 1639 aa37.34■■■■□ 3.57
NEMP1-204ENST00000554340 RIMBP3BA6NNM3 1639 aa37.34■■■■□ 3.57
NEMP1-204ENST00000554340 RIMBP3Q9UFD9 1639 aa37.34■■■■□ 3.57
NEMP1-204ENST00000554340 AQRO60306 1485 aaKnown RBP eCLIP37.34■■■■□ 3.572e-8■■■■■ 40.6
NEMP1-204ENST00000554340 CHD1O14646 1710 aa37.28■■■■□ 3.56
NEMP1-204ENST00000554340 RAD54L2Q9Y4B4 1467 aa37.24■■■■□ 3.55
NEMP1-204ENST00000554340 SOGA1O94964 1423 aa37.21■■■■□ 3.55
NEMP1-204ENST00000554340 ARHGEF11O15085 1522 aa37.2■■■■□ 3.55
NEMP1-204ENST00000554340 FGD5Q6ZNL6 1462 aa37.18■■■■□ 3.54
NEMP1-204ENST00000554340 CUX1P39880 1505 aa37.17■■■■□ 3.54
NEMP1-204ENST00000554340 WDR97A6NE52 1622 aa37.16■■■■□ 3.54
NEMP1-204ENST00000554340 TDRD9Q8NDG6 1382 aaKnown RBP37.1■■■■□ 3.53
NEMP1-204ENST00000554340 FBLN2P98095 1184 aa37.03■■■■□ 3.52
NEMP1-204ENST00000554340 SNAPC4Q5SXM2 1469 aa36.99■■■■□ 3.51
NEMP1-204ENST00000554340 SUPT5HO00267 1087 aaKnown RBP36.99■■■■□ 3.51
NEMP1-204ENST00000554340 MAGI1Q96QZ7 1491 aaPredicted RBP36.93■■■■□ 3.5
NEMP1-204ENST00000554340 GRIN2BQ13224 1484 aa36.91■■■■□ 3.5
NEMP1-204ENST00000554340 PBRM1Q86U86 1689 aa36.84■■■■□ 3.49
NEMP1-204ENST00000554340 CYB5RLQ6IPT4 315 aa36.84■■■■□ 3.49
NEMP1-204ENST00000554340 ARAP1Q96P48 1450 aa36.83■■■■□ 3.49
NEMP1-204ENST00000554340 CLASP1Q7Z460 1538 aa36.82■■■■□ 3.49
NEMP1-204ENST00000554340 SYNJ1O43426 1573 aa36.8■■■■□ 3.48
NEMP1-204ENST00000554340 CHMP7Q8WUX9 453 aaPredicted RBP36.79■■■■□ 3.48
NEMP1-204ENST00000554340 SYNJ2O15056 1496 aa36.79■■■■□ 3.48
NEMP1-204ENST00000554340 GAPVD1Q14C86 1478 aa36.78■■■■□ 3.48
NEMP1-204ENST00000554340 ABCA10Q8WWZ4 1543 aa36.78■■■■□ 3.48
NEMP1-204ENST00000554340 ABCA5Q8WWZ7 1642 aa36.76■■■■□ 3.48
NEMP1-204ENST00000554340 BIVM-ERCC5R4GMW8 1640 aa36.65■■■■□ 3.46
NEMP1-204ENST00000554340 TOP2BQ02880 1626 aa36.63■■■■□ 3.45
NEMP1-204ENST00000554340 WRNQ14191 1432 aaPredicted RBP eCLIP36.62■■■■□ 3.45
NEMP1-204ENST00000554340 ADAMTS12P58397 1594 aa36.47■■■■□ 3.43
NEMP1-204ENST00000554340 GRIN2AQ12879 1464 aa36.45■■■■□ 3.42
NEMP1-204ENST00000554340 TRHP20396 242 aaPredicted RBP36.4■■■■□ 3.42
NEMP1-204ENST00000554340 ERICH3Q5RHP9 1530 aa36.34■■■■□ 3.41
NEMP1-204ENST00000554340 CEP170Q5SW79 1584 aa36.32■■■■□ 3.41
NEMP1-204ENST00000554340 FHAD1B1AJZ9 1412 aa36.31■■■■□ 3.4
NEMP1-204ENST00000554340 NUP160Q12769 1436 aa36.31■■■■□ 3.4
NEMP1-204ENST00000554340 ERCC6L2Q5T890 1561 aa36.23■■■■□ 3.39
NEMP1-204ENST00000554340 SHROOM2Q13796 1616 aa36.2■■■■□ 3.39
NEMP1-204ENST00000554340 RUSC2Q8N2Y8 1516 aa35.96■■■■□ 3.35
NEMP1-204ENST00000554340 PRG4Q92954 1404 aaPredicted RBP35.92■■■■□ 3.34
NEMP1-204ENST00000554340 JPH4Q96JJ6 628 aa35.88■■■■□ 3.33
NEMP1-204ENST00000554340 KIF27Q86VH2 1401 aa35.87■■■■□ 3.33
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms