RNA–Protein interactions for RNA: ENST00000553654.1

NEMP1-203, Transcript of nuclear envelope integral membrane protein 1, humanhuman

TSL 5

Gene NEMP1, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEMP1-203ENST00000553654 NISCHQ9Y2I1 1504 aa25.68■■□□□ 1.7
NEMP1-203ENST00000553654 CCDC180Q9P1Z9 1646 aa23.11■■□□□ 1.29
NEMP1-203ENST00000553654 ABCC9O60706 1549 aa23.02■■□□□ 1.28
NEMP1-203ENST00000553654 AEBP2Q6ZN18 517 aaPredicted RBP22.18■■□□□ 1.14
NEMP1-203ENST00000553654 RB1CC1Q8TDY2 1594 aa21.99■■□□□ 1.11
NEMP1-203ENST00000553654 CHIC1Q5VXU3 224 aa21.85■■□□□ 1.09
NEMP1-203ENST00000553654 NACADO15069 1562 aa21.85■■□□□ 1.09
NEMP1-203ENST00000553654 MYO15BQ96JP2 1530 aa21.6■■□□□ 1.05
NEMP1-203ENST00000553654 DNAJC5BQ9UF47 199 aa21.56■■□□□ 1.04
NEMP1-203ENST00000553654 DCAF8L2P0C7V8 631 aa21.51■■□□□ 1.03
NEMP1-203ENST00000553654 UNC13AQ9UPW8 1703 aa21.43■■□□□ 1.02
NEMP1-203ENST00000553654 PABPN1Q86U42 306 aaKnown RBP eCLIP21.36■■□□□ 1.01
NEMP1-203ENST00000553654 BICRAQ9NZM4 1560 aa21.31■■□□□ 1
NEMP1-203ENST00000553654 ZCCHC6Q5VYS8 1495 aaKnown RBP21.3■■□□□ 1
NEMP1-203ENST00000553654 DCAF1Q9Y4B6 1507 aa21.29■■□□□ 1
NEMP1-203ENST00000553654 SHROOM4Q9ULL8 1493 aa21.17■□□□□ 0.98
NEMP1-203ENST00000553654 SCRIBQ14160 1630 aa20.96■□□□□ 0.95
NEMP1-203ENST00000553654 CC2D2AQ9P2K1 1620 aa20.83■□□□□ 0.93
NEMP1-203ENST00000553654 EIF4G1Q04637 1599 aaKnown RBP20.8■□□□□ 0.92
NEMP1-203ENST00000553654 CECR2Q9BXF3 1484 aa20.78■□□□□ 0.92
NEMP1-203ENST00000553654 NCAPD3P42695 1498 aa20.15■□□□□ 0.82
NEMP1-203ENST00000553654 ATAD2BQ9ULI0 1458 aa20.06■□□□□ 0.8
NEMP1-203ENST00000553654 SMARCA2P51531 1590 aa20.04■□□□□ 0.8
NEMP1-203ENST00000553654 SMARCA4P51532 1647 aa20.04■□□□□ 0.8
NEMP1-203ENST00000553654 HMGXB3Q12766 1538 aa20.03■□□□□ 0.8
NEMP1-203ENST00000553654 BAZ1AQ9NRL2 1556 aaPredicted RBP19.96■□□□□ 0.79
NEMP1-203ENST00000553654 CUX2O14529 1486 aa19.96■□□□□ 0.79
NEMP1-203ENST00000553654 ERCC6Q03468 1493 aa19.92■□□□□ 0.78
NEMP1-203ENST00000553654 PEG3Q9GZU2 1588 aa19.9■□□□□ 0.78
NEMP1-203ENST00000553654 DNAJC5Q9H3Z4 198 aa19.89■□□□□ 0.77
NEMP1-203ENST00000553654 BAZ1BQ9UIG0 1483 aaKnown RBP19.86■□□□□ 0.77
NEMP1-203ENST00000553654 NESP48681 1621 aa19.75■□□□□ 0.75
NEMP1-203ENST00000553654 MROH2BQ7Z745 1585 aa19.74■□□□□ 0.75
NEMP1-203ENST00000553654 LAMC3Q9Y6N6 1575 aa19.71■□□□□ 0.75
NEMP1-203ENST00000553654 THOC2Q8NI27 1593 aaKnown RBP19.65■□□□□ 0.74
NEMP1-203ENST00000553654 PDS5BQ9NTI5 1447 aa19.59■□□□□ 0.73
NEMP1-203ENST00000553654 KIF21AQ7Z4S6 1674 aa19.53■□□□□ 0.72
NEMP1-203ENST00000553654 CADPSQ9ULU8 1353 aa19.51■□□□□ 0.71
NEMP1-203ENST00000553654 WIZO95785 1651 aa19.48■□□□□ 0.71
NEMP1-203ENST00000553654 MRC2Q9UBG0 1479 aa19.41■□□□□ 0.7
NEMP1-203ENST00000553654 WDR62O43379 1518 aa19.39■□□□□ 0.69
NEMP1-203ENST00000553654 CEP164Q9UPV0 1460 aa19.33■□□□□ 0.68
NEMP1-203ENST00000553654 RSF1Q96T23 1441 aaPredicted RBP19.33■□□□□ 0.68
NEMP1-203ENST00000553654 TOP2AP11388 1531 aaKnown RBP19.31■□□□□ 0.68
NEMP1-203ENST00000553654 CFTRP13569 1480 aa19.3■□□□□ 0.68
NEMP1-203ENST00000553654 FANCD2Q9BXW9 1451 aa19.28■□□□□ 0.68
NEMP1-203ENST00000553654 PHF23Q9BUL5 403 aaPredicted RBP19.27■□□□□ 0.68
NEMP1-203ENST00000553654 PRDM2Q13029 1718 aa19.13■□□□□ 0.65
NEMP1-203ENST00000553654 URB2Q14146 1524 aaKnown RBP19.11■□□□□ 0.65
NEMP1-203ENST00000553654 CCDC88BA6NC98 1476 aa19.03■□□□□ 0.64
NEMP1-203ENST00000553654 IFT140Q96RY7 1462 aa18.96■□□□□ 0.63
NEMP1-203ENST00000553654 OSCARQ8IYS5 282 aa18.95■□□□□ 0.62
NEMP1-203ENST00000553654 ABCC8Q09428 1581 aa18.93■□□□□ 0.62
NEMP1-203ENST00000553654 TOPBP1Q92547 1522 aa18.92■□□□□ 0.62
NEMP1-203ENST00000553654 TRIM41Q8WV44 630 aa18.92■□□□□ 0.62
NEMP1-203ENST00000553654 DNMBPQ6XZF7 1577 aa18.87■□□□□ 0.61
NEMP1-203ENST00000553654 ZNF608Q9ULD9 1512 aaPredicted RBP18.86■□□□□ 0.61
NEMP1-203ENST00000553654 EIF4G3O43432 1585 aaKnown RBP18.81■□□□□ 0.6
NEMP1-203ENST00000553654 TARBP1Q13395 1621 aaKnown RBP18.76■□□□□ 0.59
NEMP1-203ENST00000553654 SENP3Q9H4L4 574 aaPredicted RBP18.73■□□□□ 0.59
NEMP1-203ENST00000553654 RIMBP3CA6NJZ7 1639 aa18.73■□□□□ 0.59
NEMP1-203ENST00000553654 RIMBP3BA6NNM3 1639 aa18.73■□□□□ 0.59
NEMP1-203ENST00000553654 RIMBP3Q9UFD9 1639 aa18.73■□□□□ 0.59
NEMP1-203ENST00000553654 POLA1P09884 1462 aaPredicted RBP18.72■□□□□ 0.59
NEMP1-203ENST00000553654 ARHGEF11O15085 1522 aa18.69■□□□□ 0.58
NEMP1-203ENST00000553654 AQRO60306 1485 aaKnown RBP eCLIP18.67■□□□□ 0.582e-8■■■■■ 44.7
NEMP1-203ENST00000553654 WDR97A6NE52 1622 aa18.67■□□□□ 0.58
NEMP1-203ENST00000553654 CHD1O14646 1710 aa18.63■□□□□ 0.57
NEMP1-203ENST00000553654 SOGA1O94964 1423 aa18.61■□□□□ 0.57
NEMP1-203ENST00000553654 RAD54L2Q9Y4B4 1467 aa18.59■□□□□ 0.57
NEMP1-203ENST00000553654 FGD5Q6ZNL6 1462 aa18.58■□□□□ 0.57
NEMP1-203ENST00000553654 CUX1P39880 1505 aa18.57■□□□□ 0.56
NEMP1-203ENST00000553654 TDRD9Q8NDG6 1382 aaKnown RBP18.55■□□□□ 0.56
NEMP1-203ENST00000553654 MAGI1Q96QZ7 1491 aaPredicted RBP18.53■□□□□ 0.56
NEMP1-203ENST00000553654 SNAPC4Q5SXM2 1469 aa18.52■□□□□ 0.56
NEMP1-203ENST00000553654 FBLN2P98095 1184 aa18.51■□□□□ 0.55
NEMP1-203ENST00000553654 GRIN2BQ13224 1484 aa18.5■□□□□ 0.55
NEMP1-203ENST00000553654 ARAP1Q96P48 1450 aa18.5■□□□□ 0.55
NEMP1-203ENST00000553654 CLASP1Q7Z460 1538 aa18.48■□□□□ 0.55
NEMP1-203ENST00000553654 SYNJ1O43426 1573 aa18.47■□□□□ 0.55
NEMP1-203ENST00000553654 CYB5RLQ6IPT4 315 aa18.46■□□□□ 0.55
NEMP1-203ENST00000553654 SYNJ2O15056 1496 aa18.45■□□□□ 0.54
NEMP1-203ENST00000553654 ABCA10Q8WWZ4 1543 aa18.43■□□□□ 0.54
NEMP1-203ENST00000553654 CHMP7Q8WUX9 453 aaPredicted RBP18.42■□□□□ 0.54
NEMP1-203ENST00000553654 GAPVD1Q14C86 1478 aa18.4■□□□□ 0.54
NEMP1-203ENST00000553654 PBRM1Q86U86 1689 aa18.4■□□□□ 0.54
NEMP1-203ENST00000553654 ABCA5Q8WWZ7 1642 aa18.39■□□□□ 0.53
NEMP1-203ENST00000553654 SUPT5HO00267 1087 aaKnown RBP18.33■□□□□ 0.52
NEMP1-203ENST00000553654 WRNQ14191 1432 aaPredicted RBP eCLIP18.32■□□□□ 0.52
NEMP1-203ENST00000553654 BIVM-ERCC5R4GMW8 1640 aa18.3■□□□□ 0.52
NEMP1-203ENST00000553654 TOP2BQ02880 1626 aa18.29■□□□□ 0.52
NEMP1-203ENST00000553654 GRIN2AQ12879 1464 aa18.26■□□□□ 0.51
NEMP1-203ENST00000553654 ADAMTS12P58397 1594 aa18.25■□□□□ 0.51
NEMP1-203ENST00000553654 TRHP20396 242 aaPredicted RBP18.25■□□□□ 0.51
NEMP1-203ENST00000553654 NUP160Q12769 1436 aa18.22■□□□□ 0.51
NEMP1-203ENST00000553654 ERICH3Q5RHP9 1530 aa18.2■□□□□ 0.5
NEMP1-203ENST00000553654 FHAD1B1AJZ9 1412 aa18.2■□□□□ 0.5
NEMP1-203ENST00000553654 CEP170Q5SW79 1584 aa18.17■□□□□ 0.5
NEMP1-203ENST00000553654 SHROOM2Q13796 1616 aa18.14■□□□□ 0.49
NEMP1-203ENST00000553654 ERCC6L2Q5T890 1561 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 139.3 ms