RNA–Protein interactions for RNA: ENST00000300128.8

NEMP1-201, Transcript of nuclear envelope integral membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEMP1, Length 5,590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEMP1-201ENST00000300128 PELP1Q8IZL8 1130 aaKnown RBP13.9□□□□□ -0.18
NEMP1-201ENST00000300128 HRCP23327 699 aa13.78□□□□□ -0.2
NEMP1-201ENST00000300128 PPARGC1BQ86YN6 1023 aaKnown RBP13.67□□□□□ -0.22
NEMP1-201ENST00000300128 NISCHQ9Y2I1 1504 aa13.65□□□□□ -0.22
NEMP1-201ENST00000300128 PCGF6Q9BYE7 350 aa13.58□□□□□ -0.24
NEMP1-201ENST00000300128 MYT1Q01538 1121 aa13.46□□□□□ -0.26
NEMP1-201ENST00000300128 SCAF1Q9H7N4 1312 aaKnown RBP13.27□□□□□ -0.28
NEMP1-201ENST00000300128 SUPT5HO00267 1087 aaKnown RBP13.27□□□□□ -0.29
NEMP1-201ENST00000300128 SHROOM4Q9ULL8 1493 aa13.06□□□□□ -0.32
NEMP1-201ENST00000300128 GTF3C3Q9Y5Q9 886 aa12.91□□□□□ -0.34
NEMP1-201ENST00000300128 ACIN1Q9UKV3 1341 aaKnown RBP12.87□□□□□ -0.35
NEMP1-201ENST00000300128 ZEB1P37275 1124 aaPredicted RBP12.87□□□□□ -0.35
NEMP1-201ENST00000300128 NEUROD1Q13562 356 aa12.85□□□□□ -0.35
NEMP1-201ENST00000300128 TRIM26Q12899 539 aaPredicted RBP12.84□□□□□ -0.35
NEMP1-201ENST00000300128 CHIC1Q5VXU3 224 aa12.84□□□□□ -0.35
NEMP1-201ENST00000300128 CENPBP07199 599 aaPredicted RBP12.83□□□□□ -0.36
NEMP1-201ENST00000300128 MYO15BQ96JP2 1530 aa12.79□□□□□ -0.36
NEMP1-201ENST00000300128 LOC105371045A0A1W2PR82 267 aa12.78□□□□□ -0.36
NEMP1-201ENST00000300128 YTHDC1Q96MU7 727 aaKnown RBP12.65□□□□□ -0.38
NEMP1-201ENST00000300128 BCL11AQ9H165 835 aa12.62□□□□□ -0.39
NEMP1-201ENST00000300128 TTBK1Q5TCY1 1321 aaPredicted RBP12.61□□□□□ -0.39
NEMP1-201ENST00000300128 DIEXFQ68CQ4 756 aaKnown RBP12.55□□□□□ -0.4
NEMP1-201ENST00000300128 DCAF1Q9Y4B6 1507 aa12.54□□□□□ -0.4
NEMP1-201ENST00000300128 EHMT2Q96KQ7 1210 aa12.53□□□□□ -0.4
NEMP1-201ENST00000300128 CCER1Q8TC90 406 aaPredicted RBP12.49□□□□□ -0.41
NEMP1-201ENST00000300128 FAM9AQ8IZU1 332 aaPredicted RBP12.48□□□□□ -0.41
NEMP1-201ENST00000300128 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.44□□□□□ -0.42
NEMP1-201ENST00000300128 CCDC180Q9P1Z9 1646 aa12.37□□□□□ -0.43
NEMP1-201ENST00000300128 ANP32EQ9BTT0 268 aa12.35□□□□□ -0.43
NEMP1-201ENST00000300128 PRKCSHP14314 528 aaPredicted RBP12.33□□□□□ -0.44
NEMP1-201ENST00000300128 DCAF8L2P0C7V8 631 aa12.31□□□□□ -0.44
NEMP1-201ENST00000300128 CSRNP3Q8WYN3 585 aa12.28□□□□□ -0.44
NEMP1-201ENST00000300128 MIER1Q8N108 512 aa12.15□□□□□ -0.46
NEMP1-201ENST00000300128 ZNF316A6NFI3 1004 aaPredicted RBP12.15□□□□□ -0.47
NEMP1-201ENST00000300128 ERICH6Q7L0X2 663 aa12.12□□□□□ -0.47
NEMP1-201ENST00000300128 TSHZ2Q9NRE2 1034 aa12.1□□□□□ -0.47
NEMP1-201ENST00000300128 TRIM41Q8WV44 630 aa12.1□□□□□ -0.47
NEMP1-201ENST00000300128 BCANQ96GW7 911 aa12.09□□□□□ -0.47
NEMP1-201ENST00000300128 SUPT16HQ9Y5B9 1047 aaKnown RBP12.07□□□□□ -0.48
NEMP1-201ENST00000300128 CLSPNQ9HAW4 1339 aa11.88□□□□□ -0.51
NEMP1-201ENST00000300128 ANO8Q9HCE9 1232 aaPredicted RBP11.86□□□□□ -0.51
NEMP1-201ENST00000300128 FKBP8Q14318 412 aa11.85□□□□□ -0.51
NEMP1-201ENST00000300128 RBM19Q9Y4C8 960 aaKnown RBP11.85□□□□□ -0.51
NEMP1-201ENST00000300128 NEFLP07196 543 aa11.85□□□□□ -0.51
NEMP1-201ENST00000300128 ITGAEP38570 1179 aa11.82□□□□□ -0.52
NEMP1-201ENST00000300128 HNRNPUL2Q1KMD3 747 aaKnown RBP11.82□□□□□ -0.52
NEMP1-201ENST00000300128 CCDC136Q96JN2 1154 aa11.76□□□□□ -0.53
NEMP1-201ENST00000300128 DEKP35659 375 aaKnown RBP11.75□□□□□ -0.53
NEMP1-201ENST00000300128 APLP2Q06481 763 aa11.72□□□□□ -0.53
NEMP1-201ENST00000300128 NBR1Q14596 966 aa11.69□□□□□ -0.54
NEMP1-201ENST00000300128 SALL2Q9Y467 1007 aaPredicted RBP11.68□□□□□ -0.54
NEMP1-201ENST00000300128 RTN4Q9NQC3 1192 aaKnown RBP11.68□□□□□ -0.54
NEMP1-201ENST00000300128 MSH5O43196 834 aa11.68□□□□□ -0.54
NEMP1-201ENST00000300128 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.66□□□□□ -0.54
NEMP1-201ENST00000300128 CDK11AQ9UQ88 783 aaPredicted RBP11.63□□□□□ -0.55
NEMP1-201ENST00000300128 MYT1LQ9UL68 1186 aa11.62□□□□□ -0.55
NEMP1-201ENST00000300128 EIF5BO60841 1220 aaKnown RBP11.62□□□□□ -0.55
NEMP1-201ENST00000300128 KCNH8Q96L42 1107 aa11.61□□□□□ -0.55
NEMP1-201ENST00000300128 ZCCHC6Q5VYS8 1495 aaKnown RBP11.59□□□□□ -0.55
NEMP1-201ENST00000300128 RTL5Q5HYW3 569 aaPredicted RBP11.58□□□□□ -0.56
NEMP1-201ENST00000300128 TRIM52Q96A61 297 aa11.58□□□□□ -0.56
NEMP1-201ENST00000300128 UBTFP17480 764 aaKnown RBP11.57□□□□□ -0.56
NEMP1-201ENST00000300128 IRX6P78412 446 aaPredicted RBP11.56□□□□□ -0.56
NEMP1-201ENST00000300128 RANGAP1P46060 587 aaPredicted RBP11.49□□□□□ -0.57
NEMP1-201ENST00000300128 IL27Q8NEV9 243 aa11.49□□□□□ -0.57
NEMP1-201ENST00000300128 FANCIQ9NVI1 1328 aa11.48□□□□□ -0.57
NEMP1-201ENST00000300128 DDX10Q13206 875 aaKnown RBP11.46□□□□□ -0.57
NEMP1-201ENST00000300128 ERICH6BQ5W0A0 696 aa11.46□□□□□ -0.57
NEMP1-201ENST00000300128 UBE2Q2Q8WVN8 375 aa11.44□□□□□ -0.58
NEMP1-201ENST00000300128 NOP58Q9Y2X3 529 aaKnown RBP11.42□□□□□ -0.58
NEMP1-201ENST00000300128 PAK3O75914 559 aaPredicted RBP11.35□□□□□ -0.59
NEMP1-201ENST00000300128 CEP162Q5TB80 1403 aa11.35□□□□□ -0.59
NEMP1-201ENST00000300128 ANP32CO43423 234 aa11.35□□□□□ -0.59
NEMP1-201ENST00000300128 HIRIP3Q9BW71 556 aaPredicted RBP11.34□□□□□ -0.59
NEMP1-201ENST00000300128 ANP32AP39687 249 aaKnown RBP11.34□□□□□ -0.59
NEMP1-201ENST00000300128 ZBTB47Q9UFB7 747 aaPredicted RBP11.34□□□□□ -0.59
NEMP1-201ENST00000300128 HNRNPUQ00839 825 aaKnown RBP eCLIP11.33□□□□□ -0.6
NEMP1-201ENST00000300128 PKNOX2Q96KN3 472 aa11.32□□□□□ -0.6
NEMP1-201ENST00000300128 B4GALNT3Q6L9W6 998 aa11.32□□□□□ -0.6
NEMP1-201ENST00000300128 NPM2Q86SE8 214 aaKnown RBP11.3□□□□□ -0.6
NEMP1-201ENST00000300128 TIMELESSQ9UNS1 1208 aa11.28□□□□□ -0.6
NEMP1-201ENST00000300128 LAS1LQ9Y4W2 734 aaKnown RBP11.27□□□□□ -0.61
NEMP1-201ENST00000300128 RSF1Q96T23 1441 aaPredicted RBP11.26□□□□□ -0.61
NEMP1-201ENST00000300128 PPP4R2Q9NY27 417 aa11.25□□□□□ -0.61
NEMP1-201ENST00000300128 WRNQ14191 1432 aaPredicted RBP eCLIP11.25□□□□□ -0.61
NEMP1-201ENST00000300128 NEFMP07197 916 aa11.24□□□□□ -0.61
NEMP1-201ENST00000300128 RB1CC1Q8TDY2 1594 aa11.21□□□□□ -0.61
NEMP1-201ENST00000300128 GLIPR1L2Q4G1C9 344 aa11.21□□□□□ -0.62
NEMP1-201ENST00000300128 BRPF3Q9ULD4 1205 aa11.2□□□□□ -0.62
NEMP1-201ENST00000300128 IPO9Q96P70 1041 aaKnown RBP11.19□□□□□ -0.62
NEMP1-201ENST00000300128 DHX57Q6P158 1386 aaKnown RBP11.18□□□□□ -0.62
NEMP1-201ENST00000300128 VSIG10Q8N0Z9 540 aa11.17□□□□□ -0.62
NEMP1-201ENST00000300128 TNIKQ9UKE5 1360 aa11.16□□□□□ -0.62
NEMP1-201ENST00000300128 CCER2I3L3R5 266 aa11.14□□□□□ -0.63
NEMP1-201ENST00000300128 PLEKHG5O94827 1062 aa11.14□□□□□ -0.63
NEMP1-201ENST00000300128 UNC13AQ9UPW8 1703 aa11.14□□□□□ -0.63
NEMP1-201ENST00000300128 CNGB1Q14028 1251 aaPredicted RBP11.14□□□□□ -0.63
NEMP1-201ENST00000300128 PODXL2Q9NZ53 605 aa11.13□□□□□ -0.63
NEMP1-201ENST00000300128 FAM9BQ8IZU0 186 aa11.12□□□□□ -0.63
NEMP1-201ENST00000300128 SIN3AQ96ST3 1273 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms