RNA–Protein interactions for RNA: ENST00000525690.1

RPS3-204, Transcript of ribosomal protein S3, humanhuman

TSL 3

Gene RPS3, Length 421 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-204ENST00000525690 NISCHQ9Y2I1 1504 aa23.4■■□□□ 1.34
RPS3-204ENST00000525690 CCDC180Q9P1Z9 1646 aa20.53■□□□□ 0.88
RPS3-204ENST00000525690 ZCCHC6Q5VYS8 1495 aaKnown RBP19.67■□□□□ 0.74
RPS3-204ENST00000525690 ABCC9O60706 1549 aa19.53■□□□□ 0.72
RPS3-204ENST00000525690 AEBP2Q6ZN18 517 aaPredicted RBP19.47■□□□□ 0.71
RPS3-204ENST00000525690 DCAF1Q9Y4B6 1507 aa19.35■□□□□ 0.69
RPS3-204ENST00000525690 DCAF8L2P0C7V8 631 aa19.21■□□□□ 0.67
RPS3-204ENST00000525690 MYO15BQ96JP2 1530 aa19.18■□□□□ 0.66
RPS3-204ENST00000525690 NACADO15069 1562 aa19.11■□□□□ 0.65
RPS3-204ENST00000525690 RB1CC1Q8TDY2 1594 aa18.99■□□□□ 0.63
RPS3-204ENST00000525690 SHROOM4Q9ULL8 1493 aa18.92■□□□□ 0.62
RPS3-204ENST00000525690 SCRIBQ14160 1630 aa18.85■□□□□ 0.61
RPS3-204ENST00000525690 UNC13AQ9UPW8 1703 aa18.69■□□□□ 0.58
RPS3-204ENST00000525690 BICRAQ9NZM4 1560 aa18.5■□□□□ 0.55
RPS3-204ENST00000525690 PABPN1Q86U42 306 aaKnown RBP eCLIP18.34■□□□□ 0.53
RPS3-204ENST00000525690 CECR2Q9BXF3 1484 aa18.22■□□□□ 0.51
RPS3-204ENST00000525690 CHIC1Q5VXU3 224 aa18.14■□□□□ 0.49
RPS3-204ENST00000525690 MROH2BQ7Z745 1585 aa18.1■□□□□ 0.49
RPS3-204ENST00000525690 RSF1Q96T23 1441 aaPredicted RBP18.07■□□□□ 0.48
RPS3-204ENST00000525690 BAZ1AQ9NRL2 1556 aaPredicted RBP18.07■□□□□ 0.48
RPS3-204ENST00000525690 SMARCA4P51532 1647 aa18.06■□□□□ 0.48
RPS3-204ENST00000525690 SUPT5HO00267 1087 aaKnown RBP18.03■□□□□ 0.48
RPS3-204ENST00000525690 WIZO95785 1651 aa17.94■□□□□ 0.46
RPS3-204ENST00000525690 EIF4G1Q04637 1599 aaKnown RBP17.91■□□□□ 0.46
RPS3-204ENST00000525690 PEG3Q9GZU2 1588 aa17.84■□□□□ 0.45
RPS3-204ENST00000525690 ATAD2BQ9ULI0 1458 aa17.77■□□□□ 0.44
RPS3-204ENST00000525690 TOP2AP11388 1531 aaKnown RBP17.75■□□□□ 0.43
RPS3-204ENST00000525690 SMARCA2P51531 1590 aa17.74■□□□□ 0.43
RPS3-204ENST00000525690 CC2D2AQ9P2K1 1620 aa17.69■□□□□ 0.42
RPS3-204ENST00000525690 BAZ1BQ9UIG0 1483 aaKnown RBP17.65■□□□□ 0.42
RPS3-204ENST00000525690 NCAPD3P42695 1498 aa17.63■□□□□ 0.41
RPS3-204ENST00000525690 HMGXB3Q12766 1538 aa17.63■□□□□ 0.41
RPS3-204ENST00000525690 CCDC88BA6NC98 1476 aa17.53■□□□□ 0.4
RPS3-204ENST00000525690 DNAJC5BQ9UF47 199 aa17.38■□□□□ 0.37
RPS3-204ENST00000525690 CFTRP13569 1480 aa17.2■□□□□ 0.34
RPS3-204ENST00000525690 PRDM2Q13029 1718 aa17.16■□□□□ 0.34
RPS3-204ENST00000525690 CADPSQ9ULU8 1353 aa17.15■□□□□ 0.34
RPS3-204ENST00000525690 ABCC8Q09428 1581 aa17.14■□□□□ 0.33
RPS3-204ENST00000525690 NESP48681 1621 aa17.12■□□□□ 0.33
RPS3-204ENST00000525690 LAMC3Q9Y6N6 1575 aa17.07■□□□□ 0.32
RPS3-204ENST00000525690 SYNJ1O43426 1573 aa17.02■□□□□ 0.31
RPS3-204ENST00000525690 WRNQ14191 1432 aaPredicted RBP eCLIP17■□□□□ 0.318e-7■□□□□ 9.9
RPS3-204ENST00000525690 FANCD2Q9BXW9 1451 aa16.99■□□□□ 0.31
RPS3-204ENST00000525690 TRIM41Q8WV44 630 aa16.94■□□□□ 0.3
RPS3-204ENST00000525690 CUX1P39880 1505 aa16.94■□□□□ 0.3
RPS3-204ENST00000525690 BIVM-ERCC5R4GMW8 1640 aa16.93■□□□□ 0.3
RPS3-204ENST00000525690 KIF21AQ7Z4S6 1674 aa16.93■□□□□ 0.3
RPS3-204ENST00000525690 TOP2BQ02880 1626 aa16.92■□□□□ 0.3
RPS3-204ENST00000525690 CEP164Q9UPV0 1460 aa16.9■□□□□ 0.3
RPS3-204ENST00000525690 PDS5BQ9NTI5 1447 aa16.88■□□□□ 0.29
RPS3-204ENST00000525690 URB2Q14146 1524 aaKnown RBP16.83■□□□□ 0.28
RPS3-204ENST00000525690 DNMBPQ6XZF7 1577 aa16.82■□□□□ 0.28
RPS3-204ENST00000525690 TOPBP1Q92547 1522 aa16.8■□□□□ 0.28
RPS3-204ENST00000525690 FGD5Q6ZNL6 1462 aa16.76■□□□□ 0.27
RPS3-204ENST00000525690 SENP3Q9H4L4 574 aaPredicted RBP16.76■□□□□ 0.27
RPS3-204ENST00000525690 MRC2Q9UBG0 1479 aa16.75■□□□□ 0.27
RPS3-204ENST00000525690 SOGA1O94964 1423 aa16.74■□□□□ 0.27
RPS3-204ENST00000525690 THOC2Q8NI27 1593 aaKnown RBP16.72■□□□□ 0.27
RPS3-204ENST00000525690 ERCC6Q03468 1493 aa16.72■□□□□ 0.27
RPS3-204ENST00000525690 RUSC2Q8N2Y8 1516 aa16.71■□□□□ 0.27
RPS3-204ENST00000525690 POTEDQ86YR6 584 aa16.71■□□□□ 0.27
RPS3-204ENST00000525690 POLA1P09884 1462 aaPredicted RBP16.71■□□□□ 0.27
RPS3-204ENST00000525690 WDR62O43379 1518 aa16.7■□□□□ 0.26
RPS3-204ENST00000525690 FAM9AQ8IZU1 332 aaPredicted RBP16.67■□□□□ 0.26
RPS3-204ENST00000525690 RAD54L2Q9Y4B4 1467 aa16.65■□□□□ 0.26
RPS3-204ENST00000525690 WDR97A6NE52 1622 aa16.64■□□□□ 0.25
RPS3-204ENST00000525690 EEA1Q15075 1411 aa16.62■□□□□ 0.25
RPS3-204ENST00000525690 CUX2O14529 1486 aa16.6■□□□□ 0.25
RPS3-204ENST00000525690 ABCA10Q8WWZ4 1543 aa16.6■□□□□ 0.25
RPS3-204ENST00000525690 TARBP1Q13395 1621 aaKnown RBP16.59■□□□□ 0.25
RPS3-204ENST00000525690 KIF27Q86VH2 1401 aa16.55■□□□□ 0.24
RPS3-204ENST00000525690 ABCA5Q8WWZ7 1642 aa16.53■□□□□ 0.24
RPS3-204ENST00000525690 LOC105371045A0A1W2PR82 267 aa16.52■□□□□ 0.24
RPS3-204ENST00000525690 CSRNP3Q8WYN3 585 aa16.51■□□□□ 0.23
RPS3-204ENST00000525690 IFT140Q96RY7 1462 aa16.49■□□□□ 0.23
RPS3-204ENST00000525690 KIF21BO75037 1637 aa16.49■□□□□ 0.23
RPS3-204ENST00000525690 TDRD9Q8NDG6 1382 aaKnown RBP16.46■□□□□ 0.23
RPS3-204ENST00000525690 ZNF608Q9ULD9 1512 aaPredicted RBP16.45■□□□□ 0.22
RPS3-204ENST00000525690 PRXQ9BXM0 1461 aa16.45■□□□□ 0.22
RPS3-204ENST00000525690 EHMT2Q96KQ7 1210 aa16.44■□□□□ 0.22
RPS3-204ENST00000525690 GAPVD1Q14C86 1478 aa16.43■□□□□ 0.22
RPS3-204ENST00000525690 IGF1RP08069 1367 aa16.43■□□□□ 0.22
RPS3-204ENST00000525690 GOLGA3Q08378 1498 aa16.42■□□□□ 0.22
RPS3-204ENST00000525690 RAPGEF2Q9Y4G8 1499 aa16.42■□□□□ 0.22
RPS3-204ENST00000525690 PBRM1Q86U86 1689 aa16.42■□□□□ 0.22
RPS3-204ENST00000525690 EIF4G3O43432 1585 aaKnown RBP16.42■□□□□ 0.22
RPS3-204ENST00000525690 PHF23Q9BUL5 403 aaPredicted RBP16.41■□□□□ 0.22
RPS3-204ENST00000525690 ERICH3Q5RHP9 1530 aa16.4■□□□□ 0.22
RPS3-204ENST00000525690 AQRO60306 1485 aaKnown RBP eCLIP16.4■□□□□ 0.223e-8■■■■■ 35.7
RPS3-204ENST00000525690 CUL7Q14999 1698 aa16.37■□□□□ 0.21
RPS3-204ENST00000525690 ADAMTS12P58397 1594 aa16.34■□□□□ 0.21
RPS3-204ENST00000525690 CARMIL1Q5VZK9 1371 aa16.33■□□□□ 0.2
RPS3-204ENST00000525690 GRIN2BQ13224 1484 aa16.33■□□□□ 0.2
RPS3-204ENST00000525690 TNIKQ9UKE5 1360 aa16.3■□□□□ 0.2
RPS3-204ENST00000525690 SNAPC4Q5SXM2 1469 aa16.29■□□□□ 0.2
RPS3-204ENST00000525690 FHAD1B1AJZ9 1412 aa16.25■□□□□ 0.19
RPS3-204ENST00000525690 UBTFP17480 764 aaKnown RBP16.24■□□□□ 0.19
RPS3-204ENST00000525690 CEP162Q5TB80 1403 aa16.24■□□□□ 0.19
RPS3-204ENST00000525690 MAGI1Q96QZ7 1491 aaPredicted RBP16.22■□□□□ 0.19
RPS3-204ENST00000525690 CTTNBP2Q8WZ74 1663 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms