RNA–Protein interactions for RNA: ENST00000565465.1

SNAPC5-206, Transcript of small nuclear RNA activating complex polypeptide 5, humanhuman

TSL 2

Gene SNAPC5, Length 1,069 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC5-206ENST00000565465 NISCHQ9Y2I1 1504 aa31.14■■■□□ 2.57
SNAPC5-206ENST00000565465 CCDC180Q9P1Z9 1646 aa27.74■■■□□ 2.03
SNAPC5-206ENST00000565465 ABCC9O60706 1549 aa27.72■■■□□ 2.03
SNAPC5-206ENST00000565465 DNAJC5BQ9UF47 199 aa26.29■■□□□ 1.8
SNAPC5-206ENST00000565465 RB1CC1Q8TDY2 1594 aa26.2■■□□□ 1.78
SNAPC5-206ENST00000565465 NACADO15069 1562 aa26.11■■□□□ 1.77
SNAPC5-206ENST00000565465 DCAF8L2P0C7V8 631 aa25.98■■□□□ 1.75
SNAPC5-206ENST00000565465 MYO15BQ96JP2 1530 aa25.97■■□□□ 1.75
SNAPC5-206ENST00000565465 ZCCHC6Q5VYS8 1495 aaKnown RBP25.92■■□□□ 1.74
SNAPC5-206ENST00000565465 DCAF1Q9Y4B6 1507 aa25.82■■□□□ 1.72
SNAPC5-206ENST00000565465 UNC13AQ9UPW8 1703 aa25.76■■□□□ 1.71
SNAPC5-206ENST00000565465 PABPN1Q86U42 306 aaKnown RBP eCLIP25.7■■□□□ 1.7
SNAPC5-206ENST00000565465 BICRAQ9NZM4 1560 aa25.61■■□□□ 1.69
SNAPC5-206ENST00000565465 SCRIBQ14160 1630 aa25.23■■□□□ 1.63
SNAPC5-206ENST00000565465 SHROOM4Q9ULL8 1493 aa25.14■■□□□ 1.61
SNAPC5-206ENST00000565465 CC2D2AQ9P2K1 1620 aa25.04■■□□□ 1.6
SNAPC5-206ENST00000565465 CECR2Q9BXF3 1484 aa24.96■■□□□ 1.59
SNAPC5-206ENST00000565465 EIF4G1Q04637 1599 aaKnown RBP24.93■■□□□ 1.58
SNAPC5-206ENST00000565465 DNAJC5Q9H3Z4 198 aa24.21■■□□□ 1.47
SNAPC5-206ENST00000565465 BAZ1AQ9NRL2 1556 aaPredicted RBP24.16■■□□□ 1.46
SNAPC5-206ENST00000565465 SMARCA4P51532 1647 aa24.16■■□□□ 1.46
SNAPC5-206ENST00000565465 NCAPD3P42695 1498 aa24.07■■□□□ 1.44
SNAPC5-206ENST00000565465 SMARCA2P51531 1590 aa24.06■■□□□ 1.44
SNAPC5-206ENST00000565465 ATAD2BQ9ULI0 1458 aa24.05■■□□□ 1.44
SNAPC5-206ENST00000565465 CUX2O14529 1486 aa23.97■■□□□ 1.43
SNAPC5-206ENST00000565465 PEG3Q9GZU2 1588 aa23.97■■□□□ 1.43
SNAPC5-206ENST00000565465 MROH2BQ7Z745 1585 aa23.95■■□□□ 1.43
SNAPC5-206ENST00000565465 HMGXB3Q12766 1538 aa23.95■■□□□ 1.43
SNAPC5-206ENST00000565465 ERCC6Q03468 1493 aa23.86■■□□□ 1.41
SNAPC5-206ENST00000565465 BAZ1BQ9UIG0 1483 aaKnown RBP23.86■■□□□ 1.41
SNAPC5-206ENST00000565465 NESP48681 1621 aa23.79■■□□□ 1.4
SNAPC5-206ENST00000565465 WIZO95785 1651 aa23.69■■□□□ 1.38
SNAPC5-206ENST00000565465 RSF1Q96T23 1441 aaPredicted RBP23.68■■□□□ 1.38
SNAPC5-206ENST00000565465 THOC2Q8NI27 1593 aaKnown RBP23.65■■□□□ 1.38
SNAPC5-206ENST00000565465 TOP2AP11388 1531 aaKnown RBP23.49■■□□□ 1.35
SNAPC5-206ENST00000565465 LAMC3Q9Y6N6 1575 aa23.48■■□□□ 1.35
SNAPC5-206ENST00000565465 KIF21AQ7Z4S6 1674 aa23.48■■□□□ 1.35
SNAPC5-206ENST00000565465 CADPSQ9ULU8 1353 aa23.36■■□□□ 1.33
SNAPC5-206ENST00000565465 PDS5BQ9NTI5 1447 aa23.31■■□□□ 1.32
SNAPC5-206ENST00000565465 CFTRP13569 1480 aa23.21■■□□□ 1.31
SNAPC5-206ENST00000565465 WDR62O43379 1518 aa23.2■■□□□ 1.3
SNAPC5-206ENST00000565465 MRC2Q9UBG0 1479 aa23.19■■□□□ 1.3
SNAPC5-206ENST00000565465 CCDC88BA6NC98 1476 aa23.18■■□□□ 1.3
SNAPC5-206ENST00000565465 FANCD2Q9BXW9 1451 aa23.07■■□□□ 1.28
SNAPC5-206ENST00000565465 CEP164Q9UPV0 1460 aa23.06■■□□□ 1.28
SNAPC5-206ENST00000565465 PRDM2Q13029 1718 aa23.03■■□□□ 1.28
SNAPC5-206ENST00000565465 SUPT5HO00267 1087 aaKnown RBP23■■□□□ 1.27
SNAPC5-206ENST00000565465 TRIM41Q8WV44 630 aa22.99■■□□□ 1.27
SNAPC5-206ENST00000565465 URB2Q14146 1524 aaKnown RBP22.89■■□□□ 1.26
SNAPC5-206ENST00000565465 ABCC8Q09428 1581 aa22.77■■□□□ 1.24
SNAPC5-206ENST00000565465 TOPBP1Q92547 1522 aa22.69■■□□□ 1.22
SNAPC5-206ENST00000565465 DNMBPQ6XZF7 1577 aa22.68■■□□□ 1.22
SNAPC5-206ENST00000565465 OSCARQ8IYS5 282 aa22.66■■□□□ 1.22
SNAPC5-206ENST00000565465 ZNF608Q9ULD9 1512 aaPredicted RBP22.66■■□□□ 1.22
SNAPC5-206ENST00000565465 RIMBP3CA6NJZ7 1639 aa22.63■■□□□ 1.21
SNAPC5-206ENST00000565465 RIMBP3BA6NNM3 1639 aa22.63■■□□□ 1.21
SNAPC5-206ENST00000565465 RIMBP3Q9UFD9 1639 aa22.63■■□□□ 1.21
SNAPC5-206ENST00000565465 IFT140Q96RY7 1462 aa22.6■■□□□ 1.21
SNAPC5-206ENST00000565465 EIF4G3O43432 1585 aaKnown RBP22.52■■□□□ 1.2
SNAPC5-206ENST00000565465 ARHGEF11O15085 1522 aa22.52■■□□□ 1.19
SNAPC5-206ENST00000565465 POLA1P09884 1462 aaPredicted RBP22.49■■□□□ 1.19
SNAPC5-206ENST00000565465 CUX1P39880 1505 aa22.48■■□□□ 1.19
SNAPC5-206ENST00000565465 TARBP1Q13395 1621 aaKnown RBP22.45■■□□□ 1.18
SNAPC5-206ENST00000565465 FGD5Q6ZNL6 1462 aa22.42■■□□□ 1.18
SNAPC5-206ENST00000565465 SOGA1O94964 1423 aa22.41■■□□□ 1.18
SNAPC5-206ENST00000565465 CHD1O14646 1710 aa22.39■■□□□ 1.17
SNAPC5-206ENST00000565465 WDR97A6NE52 1622 aa22.35■■□□□ 1.17
SNAPC5-206ENST00000565465 RAD54L2Q9Y4B4 1467 aa22.35■■□□□ 1.17
SNAPC5-206ENST00000565465 WRNQ14191 1432 aaPredicted RBP eCLIP22.35■■□□□ 1.17
SNAPC5-206ENST00000565465 AQRO60306 1485 aaKnown RBP eCLIP22.34■■□□□ 1.17
SNAPC5-206ENST00000565465 ARAP1Q96P48 1450 aa22.32■■□□□ 1.16
SNAPC5-206ENST00000565465 TOP2BQ02880 1626 aa22.31■■□□□ 1.16
SNAPC5-206ENST00000565465 BIVM-ERCC5R4GMW8 1640 aa22.31■■□□□ 1.16
SNAPC5-206ENST00000565465 TDRD9Q8NDG6 1382 aaKnown RBP22.25■■□□□ 1.15
SNAPC5-206ENST00000565465 SYNJ1O43426 1573 aa22.25■■□□□ 1.15
SNAPC5-206ENST00000565465 ABCA10Q8WWZ4 1543 aa22.24■■□□□ 1.15
SNAPC5-206ENST00000565465 CYB5RLQ6IPT4 315 aa22.19■■□□□ 1.14
SNAPC5-206ENST00000565465 GRIN2BQ13224 1484 aa22.17■■□□□ 1.14
SNAPC5-206ENST00000565465 CLASP1Q7Z460 1538 aa22.16■■□□□ 1.14
SNAPC5-206ENST00000565465 GAPVD1Q14C86 1478 aa22.16■■□□□ 1.14
SNAPC5-206ENST00000565465 SNAPC4Q5SXM2 1469 aa22.15■■□□□ 1.14
SNAPC5-206ENST00000565465 MAGI1Q96QZ7 1491 aaPredicted RBP22.14■■□□□ 1.13
SNAPC5-206ENST00000565465 ABCA5Q8WWZ7 1642 aa22.13■■□□□ 1.13
SNAPC5-206ENST00000565465 PBRM1Q86U86 1689 aa22.1■■□□□ 1.13
SNAPC5-206ENST00000565465 FBLN2P98095 1184 aa22.07■■□□□ 1.12
SNAPC5-206ENST00000565465 SYNJ2O15056 1496 aa22.03■■□□□ 1.12
SNAPC5-206ENST00000565465 CHMP7Q8WUX9 453 aaPredicted RBP22.03■■□□□ 1.12
SNAPC5-206ENST00000565465 ERICH3Q5RHP9 1530 aa22■■□□□ 1.11
SNAPC5-206ENST00000565465 TRHP20396 242 aaPredicted RBP21.96■■□□□ 1.11
SNAPC5-206ENST00000565465 ADAMTS12P58397 1594 aa21.92■■□□□ 1.1
SNAPC5-206ENST00000565465 FHAD1B1AJZ9 1412 aa21.91■■□□□ 1.1
SNAPC5-206ENST00000565465 KIF27Q86VH2 1401 aa21.91■■□□□ 1.1
SNAPC5-206ENST00000565465 GRIN2AQ12879 1464 aa21.87■■□□□ 1.09
SNAPC5-206ENST00000565465 ERCC6L2Q5T890 1561 aa21.83■■□□□ 1.09
SNAPC5-206ENST00000565465 IGF1RP08069 1367 aa21.8■■□□□ 1.08
SNAPC5-206ENST00000565465 NUP160Q12769 1436 aa21.79■■□□□ 1.08
SNAPC5-206ENST00000565465 CUL7Q14999 1698 aa21.78■■□□□ 1.08
SNAPC5-206ENST00000565465 CEP170Q5SW79 1584 aa21.74■■□□□ 1.07
SNAPC5-206ENST00000565465 CARMIL1Q5VZK9 1371 aa21.68■■□□□ 1.06
SNAPC5-206ENST00000565465 SHROOM2Q13796 1616 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms