Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VPS25Q9BRG1 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
VPS25Q9BRG1 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
VPS25Q9BRG1 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
VPS25Q9BRG1 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC14.85□□□□□ -0.03
VPS25Q9BRG1 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VPS25Q9BRG1 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
VPS25Q9BRG1 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VPS25Q9BRG1 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
VPS25Q9BRG1 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VPS25Q9BRG1 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VPS25Q9BRG1 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VPS25Q9BRG1 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
VPS25Q9BRG1 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VPS25Q9BRG1 AC004408.2-201ENST00000623613 2777 ntBASIC14.85□□□□□ -0.03
VPS25Q9BRG1 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VPS25Q9BRG1 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
VPS25Q9BRG1 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
VPS25Q9BRG1 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
VPS25Q9BRG1 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
VPS25Q9BRG1 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VPS25Q9BRG1 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VPS25Q9BRG1 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VPS25Q9BRG1 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VPS25Q9BRG1 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
VPS25Q9BRG1 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
VPS25Q9BRG1 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VPS25Q9BRG1 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC14.84□□□□□ -0.03
VPS25Q9BRG1 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
VPS25Q9BRG1 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VPS25Q9BRG1 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
VPS25Q9BRG1 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
VPS25Q9BRG1 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VPS25Q9BRG1 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
VPS25Q9BRG1 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
VPS25Q9BRG1 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
VPS25Q9BRG1 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
VPS25Q9BRG1 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
VPS25Q9BRG1 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.03
VPS25Q9BRG1 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
VPS25Q9BRG1 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
VPS25Q9BRG1 AFG3L1P-217ENST00000557444 2447 ntBASIC14.83□□□□□ -0.04
VPS25Q9BRG1 AC092053.2-201ENST00000640557 1818 ntBASIC14.83□□□□□ -0.04
VPS25Q9BRG1 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VPS25Q9BRG1 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VPS25Q9BRG1 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VPS25Q9BRG1 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VPS25Q9BRG1 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
VPS25Q9BRG1 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
VPS25Q9BRG1 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
VPS25Q9BRG1 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
VPS25Q9BRG1 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VPS25Q9BRG1 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VPS25Q9BRG1 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VPS25Q9BRG1 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC14.83□□□□□ -0.04
VPS25Q9BRG1 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS25Q9BRG1 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS25Q9BRG1 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS25Q9BRG1 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
VPS25Q9BRG1 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS25Q9BRG1 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS25Q9BRG1 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS25Q9BRG1 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC14.82□□□□□ -0.04
VPS25Q9BRG1 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
VPS25Q9BRG1 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS25Q9BRG1 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC14.82□□□□□ -0.04
VPS25Q9BRG1 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS25Q9BRG1 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC14.82□□□□□ -0.04
VPS25Q9BRG1 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
VPS25Q9BRG1 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
VPS25Q9BRG1 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS25Q9BRG1 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
VPS25Q9BRG1 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS25Q9BRG1 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS25Q9BRG1 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS25Q9BRG1 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
VPS25Q9BRG1 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
VPS25Q9BRG1 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
VPS25Q9BRG1 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
VPS25Q9BRG1 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VPS25Q9BRG1 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VPS25Q9BRG1 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
VPS25Q9BRG1 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
VPS25Q9BRG1 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
VPS25Q9BRG1 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
VPS25Q9BRG1 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VPS25Q9BRG1 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VPS25Q9BRG1 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VPS25Q9BRG1 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VPS25Q9BRG1 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VPS25Q9BRG1 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VPS25Q9BRG1 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VPS25Q9BRG1 SMG8-203ENST00000578922 2178 ntBASIC14.81□□□□□ -0.04
VPS25Q9BRG1 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VPS25Q9BRG1 MEST-211ENST00000437945 1455 ntTSL 5 BASIC14.81□□□□□ -0.04
VPS25Q9BRG1 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
VPS25Q9BRG1 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VPS25Q9BRG1 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
VPS25Q9BRG1 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VPS25Q9BRG1 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms