RNA–Protein interactions for RNA: ENST00000576738.1

LINC01979-201, Transcript of long intergenic non-protein coding RNA 1979, humanhuman

TSL 1 (best) BASIC

Gene LINC01979, Length 5,271 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01979-201ENST00000576738 DCAF8L2P0C7V8 631 aa28.08■■■□□ 2.09
LINC01979-201ENST00000576738 NISCHQ9Y2I1 1504 aa27.09■■□□□ 1.93
LINC01979-201ENST00000576738 SUPT5HO00267 1087 aaKnown RBP26.8■■□□□ 1.88
LINC01979-201ENST00000576738 PELP1Q8IZL8 1130 aaKnown RBP26.61■■□□□ 1.85
LINC01979-201ENST00000576738 SHROOM4Q9ULL8 1493 aa26.25■■□□□ 1.79
LINC01979-201ENST00000576738 APLP2Q06481 763 aa26.06■■□□□ 1.76
LINC01979-201ENST00000576738 FAM9AQ8IZU1 332 aaPredicted RBP25.79■■□□□ 1.72
LINC01979-201ENST00000576738 EHMT2Q96KQ7 1210 aa25.69■■□□□ 1.7
LINC01979-201ENST00000576738 PCGF6Q9BYE7 350 aa25.5■■□□□ 1.67
LINC01979-201ENST00000576738 ZEB1P37275 1124 aaPredicted RBP25.47■■□□□ 1.67
LINC01979-201ENST00000576738 CENPBP07199 599 aaPredicted RBP25.4■■□□□ 1.66
LINC01979-201ENST00000576738 CCER1Q8TC90 406 aaPredicted RBP25.39■■□□□ 1.66
LINC01979-201ENST00000576738 ERICH6Q7L0X2 663 aa25.23■■□□□ 1.63
LINC01979-201ENST00000576738 TRIM41Q8WV44 630 aa25.02■■□□□ 1.6
LINC01979-201ENST00000576738 MYT1Q01538 1121 aa24.95■■□□□ 1.58
LINC01979-201ENST00000576738 TTBK1Q5TCY1 1321 aaPredicted RBP24.94■■□□□ 1.58
LINC01979-201ENST00000576738 NEFLP07196 543 aa24.87■■□□□ 1.57
LINC01979-201ENST00000576738 UBTFP17480 764 aaKnown RBP24.75■■□□□ 1.55
LINC01979-201ENST00000576738 ATP1B4Q9UN42 357 aaPredicted RBP24.72■■□□□ 1.55
LINC01979-201ENST00000576738 RANGAP1P46060 587 aaPredicted RBP24.69■■□□□ 1.54
LINC01979-201ENST00000576738 HRCP23327 699 aa24.57■■□□□ 1.52
LINC01979-201ENST00000576738 TRIM26Q12899 539 aaPredicted RBP24.5■■□□□ 1.51
LINC01979-201ENST00000576738 YTHDC1Q96MU7 727 aaKnown RBP24.35■■□□□ 1.49
LINC01979-201ENST00000576738 DAXXQ9UER7 740 aaPredicted RBP24.2■■□□□ 1.46
LINC01979-201ENST00000576738 PPARGC1BQ86YN6 1023 aaKnown RBP24.19■■□□□ 1.46
LINC01979-201ENST00000576738 CHIC1Q5VXU3 224 aa24.19■■□□□ 1.46
LINC01979-201ENST00000576738 LOC105371045A0A1W2PR82 267 aa24.07■■□□□ 1.44
LINC01979-201ENST00000576738 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.89■■□□□ 1.41
LINC01979-201ENST00000576738 HNRNPUL2Q1KMD3 747 aaKnown RBP23.89■■□□□ 1.41
LINC01979-201ENST00000576738 MYT1LQ9UL68 1186 aa23.87■■□□□ 1.41
LINC01979-201ENST00000576738 ITGAEP38570 1179 aa23.83■■□□□ 1.4
LINC01979-201ENST00000576738 POLR3GLQ9BT43 218 aa23.81■■□□□ 1.4
LINC01979-201ENST00000576738 DIEXFQ68CQ4 756 aaKnown RBP23.67■■□□□ 1.38
LINC01979-201ENST00000576738 RTL5Q5HYW3 569 aaPredicted RBP23.63■■□□□ 1.37
LINC01979-201ENST00000576738 ZNF316A6NFI3 1004 aaPredicted RBP23.57■■□□□ 1.36
LINC01979-201ENST00000576738 CLSPNQ9HAW4 1339 aa23.5■■□□□ 1.35
LINC01979-201ENST00000576738 SLC4A1APQ9BWU0 796 aaKnown RBP23.42■■□□□ 1.34
LINC01979-201ENST00000576738 FAM50AQ14320 339 aaKnown RBP23.35■■□□□ 1.33
LINC01979-201ENST00000576738 CNGB1Q14028 1251 aaPredicted RBP23.34■■□□□ 1.33
LINC01979-201ENST00000576738 GTF3C3Q9Y5Q9 886 aa23.33■■□□□ 1.33
LINC01979-201ENST00000576738 TRIM52Q96A61 297 aa23.3■■□□□ 1.32
LINC01979-201ENST00000576738 ANP32CO43423 234 aa23.25■■□□□ 1.31
LINC01979-201ENST00000576738 ZBTB47Q9UFB7 747 aaPredicted RBP23.2■■□□□ 1.3
LINC01979-201ENST00000576738 CDK11AQ9UQ88 783 aaPredicted RBP23.17■■□□□ 1.3
LINC01979-201ENST00000576738 ACIN1Q9UKV3 1341 aaKnown RBP23.11■■□□□ 1.29
LINC01979-201ENST00000576738 NEUROD1Q13562 356 aa23.1■■□□□ 1.29
LINC01979-201ENST00000576738 NEFMP07197 916 aa22.99■■□□□ 1.27
LINC01979-201ENST00000576738 BCANQ96GW7 911 aa22.99■■□□□ 1.27
LINC01979-201ENST00000576738 CANXP27824 592 aaKnown RBP22.92■■□□□ 1.26
LINC01979-201ENST00000576738 ZNF326Q5BKZ1 582 aaKnown RBP22.92■■□□□ 1.26
LINC01979-201ENST00000576738 ABCC9O60706 1549 aa22.91■■□□□ 1.26
LINC01979-201ENST00000576738 DCAF1Q9Y4B6 1507 aa22.89■■□□□ 1.25
LINC01979-201ENST00000576738 ANP32AP39687 249 aaKnown RBP22.84■■□□□ 1.25
LINC01979-201ENST00000576738 PABPN1Q86U42 306 aaKnown RBP eCLIP22.83■■□□□ 1.24
LINC01979-201ENST00000576738 CSRNP3Q8WYN3 585 aa22.78■■□□□ 1.24
LINC01979-201ENST00000576738 FBLN2P98095 1184 aa22.67■■□□□ 1.22
LINC01979-201ENST00000576738 ANP32BQ92688 251 aaKnown RBP22.62■■□□□ 1.21
LINC01979-201ENST00000576738 SLC24A1O60721 1099 aa22.59■■□□□ 1.21
LINC01979-201ENST00000576738 TONSLQ96HA7 1378 aa22.57■■□□□ 1.2
LINC01979-201ENST00000576738 UPF2Q9HAU5 1272 aaKnown RBP22.56■■□□□ 1.2
LINC01979-201ENST00000576738 ZCCHC6Q5VYS8 1495 aaKnown RBP22.52■■□□□ 1.2
LINC01979-201ENST00000576738 P3H3Q8IVL6 736 aa22.48■■□□□ 1.19
LINC01979-201ENST00000576738 ZNF777Q9ULD5 760 aaPredicted RBP22.47■■□□□ 1.19
LINC01979-201ENST00000576738 FKBP8Q14318 412 aa22.47■■□□□ 1.19
LINC01979-201ENST00000576738 SCAF1Q9H7N4 1312 aaKnown RBP22.47■■□□□ 1.19
LINC01979-201ENST00000576738 ESF1Q9H501 851 aaKnown RBP22.45■■□□□ 1.18
LINC01979-201ENST00000576738 HSP90AA1P07900 732 aaKnown RBP22.44■■□□□ 1.18
LINC01979-201ENST00000576738 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.43■■□□□ 1.18
LINC01979-201ENST00000576738 NPM2Q86SE8 214 aaKnown RBP22.4■■□□□ 1.18
LINC01979-201ENST00000576738 BCL11AQ9H165 835 aa22.38■■□□□ 1.17
LINC01979-201ENST00000576738 HNRNPUQ00839 825 aaKnown RBP eCLIP22.36■■□□□ 1.17
LINC01979-201ENST00000576738 ARID3CA6NKF2 412 aa22.31■■□□□ 1.16
LINC01979-201ENST00000576738 STAG3Q9UJ98 1225 aa22.3■■□□□ 1.16
LINC01979-201ENST00000576738 DDX10Q13206 875 aaKnown RBP22.3■■□□□ 1.16
LINC01979-201ENST00000576738 GLIPR1L2Q4G1C9 344 aa22.28■■□□□ 1.16
LINC01979-201ENST00000576738 MYO15BQ96JP2 1530 aa22.28■■□□□ 1.16
LINC01979-201ENST00000576738 NPM1P06748 294 aaKnown RBP eCLIP22.27■■□□□ 1.16
LINC01979-201ENST00000576738 TMC1Q8TDI8 760 aa22.27■■□□□ 1.15
LINC01979-201ENST00000576738 MIER1Q8N108 512 aa22.24■■□□□ 1.15
LINC01979-201ENST00000576738 CCDC136Q96JN2 1154 aa22.24■■□□□ 1.15
LINC01979-201ENST00000576738 SCRIBQ14160 1630 aa22.24■■□□□ 1.15
LINC01979-201ENST00000576738 CHGAP10645 457 aaKnown RBP22.23■■□□□ 1.15
LINC01979-201ENST00000576738 FAM9BQ8IZU0 186 aa22.22■■□□□ 1.15
LINC01979-201ENST00000576738 WDR43Q15061 677 aaKnown RBP eCLIP22.21■■□□□ 1.15
LINC01979-201ENST00000576738 TSPY4P0CV99 314 aa22.17■■□□□ 1.14
LINC01979-201ENST00000576738 TSPY10P0CW01 314 aa22.17■■□□□ 1.14
LINC01979-201ENST00000576738 EIF5BO60841 1220 aaKnown RBP22.14■■□□□ 1.13
LINC01979-201ENST00000576738 MRS2Q9HD23 443 aa22.11■■□□□ 1.13
LINC01979-201ENST00000576738 CCDC180Q9P1Z9 1646 aa22.1■■□□□ 1.13
LINC01979-201ENST00000576738 MYH16Q9H6N6 1097 aa22.09■■□□□ 1.13
LINC01979-201ENST00000576738 MTUS2Q5JR59 1369 aa22.09■■□□□ 1.13
LINC01979-201ENST00000576738 ANP32EQ9BTT0 268 aa22.08■■□□□ 1.13
LINC01979-201ENST00000576738 DDRGK1Q96HY6 314 aa22.03■■□□□ 1.12
LINC01979-201ENST00000576738 EEA1Q15075 1411 aa22.03■■□□□ 1.12
LINC01979-201ENST00000576738 EIF4G2P78344 907 aaKnown RBP eCLIP22.03■■□□□ 1.12
LINC01979-201ENST00000576738 CLIP1P30622 1438 aa22.02■■□□□ 1.12
LINC01979-201ENST00000576738 BECN1Q14457 450 aa22■■□□□ 1.11
LINC01979-201ENST00000576738 CHIC2Q9UKJ5 165 aa21.99■■□□□ 1.11
LINC01979-201ENST00000576738 RSF1Q96T23 1441 aaPredicted RBP21.99■■□□□ 1.11
LINC01979-201ENST00000576738 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms