RNA–Protein interactions for RNA: ENST00000587024.5

SBNO2-204, Transcript of strawberry notch homolog 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SBNO2, Length 4,861 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO2-204ENST00000587024 NISCHQ9Y2I1 1504 aa34.05■■■■□ 3.04
SBNO2-204ENST00000587024 DCAF8L2P0C7V8 631 aa32.46■■■□□ 2.79
SBNO2-204ENST00000587024 SHROOM4Q9ULL8 1493 aa30.11■■■□□ 2.41
SBNO2-204ENST00000587024 ABCC9O60706 1549 aa29.87■■■□□ 2.37
SBNO2-204ENST00000587024 SUPT5HO00267 1087 aaKnown RBP29.62■■■□□ 2.33
SBNO2-204ENST00000587024 CCDC180Q9P1Z9 1646 aa28.95■■■□□ 2.22
SBNO2-204ENST00000587024 PABPN1Q86U42 306 aaKnown RBP eCLIP28.91■■■□□ 2.22
SBNO2-204ENST00000587024 ZCCHC6Q5VYS8 1495 aaKnown RBP28.18■■■□□ 2.1
SBNO2-204ENST00000587024 RB1CC1Q8TDY2 1594 aa28.16■■■□□ 2.1
SBNO2-204ENST00000587024 EHMT2Q96KQ7 1210 aa27.99■■■□□ 2.07
SBNO2-204ENST00000587024 SCRIBQ14160 1630 aa27.97■■■□□ 2.07
SBNO2-204ENST00000587024 NACADO15069 1562 aa27.93■■■□□ 2.06
SBNO2-204ENST00000587024 FAM9AQ8IZU1 332 aaPredicted RBP27.73■■■□□ 2.03
SBNO2-204ENST00000587024 TRIM41Q8WV44 630 aa27.69■■■□□ 2.02
SBNO2-204ENST00000587024 DCAF1Q9Y4B6 1507 aa27.37■■□□□ 1.97
SBNO2-204ENST00000587024 RANGAP1P46060 587 aaPredicted RBP27.36■■□□□ 1.97
SBNO2-204ENST00000587024 APLP2Q06481 763 aa27.27■■□□□ 1.96
SBNO2-204ENST00000587024 UBTFP17480 764 aaKnown RBP27.16■■□□□ 1.94
SBNO2-204ENST00000587024 ATP1B4Q9UN42 357 aaPredicted RBP27.08■■□□□ 1.93
SBNO2-204ENST00000587024 MYO15BQ96JP2 1530 aa27.06■■□□□ 1.92
SBNO2-204ENST00000587024 TTBK1Q5TCY1 1321 aaPredicted RBP26.93■■□□□ 1.9
SBNO2-204ENST00000587024 FBLN2P98095 1184 aa26.87■■□□□ 1.89
SBNO2-204ENST00000587024 BAZ1BQ9UIG0 1483 aaKnown RBP26.79■■□□□ 1.88
SBNO2-204ENST00000587024 BAZ1AQ9NRL2 1556 aaPredicted RBP26.69■■□□□ 1.86
SBNO2-204ENST00000587024 CECR2Q9BXF3 1484 aa26.68■■□□□ 1.86
SBNO2-204ENST00000587024 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.66■■□□□ 1.86
SBNO2-204ENST00000587024 HNRNPUL2Q1KMD3 747 aaKnown RBP26.66■■□□□ 1.86
SBNO2-204ENST00000587024 RSF1Q96T23 1441 aaPredicted RBP26.64■■□□□ 1.86
SBNO2-204ENST00000587024 CHIC1Q5VXU3 224 aa26.64■■□□□ 1.85
SBNO2-204ENST00000587024 ERCC6Q03468 1493 aa26.55■■□□□ 1.84
SBNO2-204ENST00000587024 PELP1Q8IZL8 1130 aaKnown RBP26.5■■□□□ 1.83
SBNO2-204ENST00000587024 SMARCA2P51531 1590 aa26.38■■□□□ 1.81
SBNO2-204ENST00000587024 MROH2BQ7Z745 1585 aa26.3■■□□□ 1.8
SBNO2-204ENST00000587024 MYT1LQ9UL68 1186 aa26.28■■□□□ 1.8
SBNO2-204ENST00000587024 LOC105371045A0A1W2PR82 267 aa26.17■■□□□ 1.78
SBNO2-204ENST00000587024 CHMP7Q8WUX9 453 aaPredicted RBP26.17■■□□□ 1.78
SBNO2-204ENST00000587024 ATAD2BQ9ULI0 1458 aa26.15■■□□□ 1.78
SBNO2-204ENST00000587024 PDS5BQ9NTI5 1447 aa26.12■■□□□ 1.77
SBNO2-204ENST00000587024 CSRNP3Q8WYN3 585 aa26.12■■□□□ 1.77
SBNO2-204ENST00000587024 EIF4G1Q04637 1599 aaKnown RBP26.06■■□□□ 1.76
SBNO2-204ENST00000587024 SMARCA4P51532 1647 aa26.02■■□□□ 1.76
SBNO2-204ENST00000587024 PPARGC1BQ86YN6 1023 aaKnown RBP25.99■■□□□ 1.75
SBNO2-204ENST00000587024 P3H3Q8IVL6 736 aa25.99■■□□□ 1.75
SBNO2-204ENST00000587024 CADPSQ9ULU8 1353 aa25.95■■□□□ 1.75
SBNO2-204ENST00000587024 NPM1P06748 294 aaKnown RBP eCLIP25.93■■□□□ 1.74
SBNO2-204ENST00000587024 WRNQ14191 1432 aaPredicted RBP eCLIP25.92■■□□□ 1.749e-6■■■■■ 50.1
SBNO2-204ENST00000587024 DNAJC5BQ9UF47 199 aa25.92■■□□□ 1.74
SBNO2-204ENST00000587024 CCDC88BA6NC98 1476 aa25.9■■□□□ 1.74
SBNO2-204ENST00000587024 WIZO95785 1651 aa25.89■■□□□ 1.73
SBNO2-204ENST00000587024 ARID3CA6NKF2 412 aa25.87■■□□□ 1.73
SBNO2-204ENST00000587024 NCAPD3P42695 1498 aa25.82■■□□□ 1.72
SBNO2-204ENST00000587024 TOP2AP11388 1531 aaKnown RBP25.82■■□□□ 1.72
SBNO2-204ENST00000587024 CC2D2AQ9P2K1 1620 aa25.8■■□□□ 1.72
SBNO2-204ENST00000587024 ITGAEP38570 1179 aa25.8■■□□□ 1.72
SBNO2-204ENST00000587024 ZEB1P37275 1124 aaPredicted RBP25.8■■□□□ 1.72
SBNO2-204ENST00000587024 BICRAQ9NZM4 1560 aa25.78■■□□□ 1.72
SBNO2-204ENST00000587024 PCGF6Q9BYE7 350 aa25.69■■□□□ 1.7
SBNO2-204ENST00000587024 CEP164Q9UPV0 1460 aa25.67■■□□□ 1.7
SBNO2-204ENST00000587024 KIF27Q86VH2 1401 aa25.66■■□□□ 1.7
SBNO2-204ENST00000587024 CDK11AQ9UQ88 783 aaPredicted RBP25.65■■□□□ 1.7
SBNO2-204ENST00000587024 CENPBP07199 599 aaPredicted RBP25.63■■□□□ 1.69
SBNO2-204ENST00000587024 FANCD2Q9BXW9 1451 aa25.58■■□□□ 1.69
SBNO2-204ENST00000587024 SOGA1O94964 1423 aa25.57■■□□□ 1.68
SBNO2-204ENST00000587024 TDRD9Q8NDG6 1382 aaKnown RBP25.53■■□□□ 1.68
SBNO2-204ENST00000587024 CUX2O14529 1486 aa25.53■■□□□ 1.68
SBNO2-204ENST00000587024 FAM50AQ14320 339 aaKnown RBP25.53■■□□□ 1.68
SBNO2-204ENST00000587024 MYT1Q01538 1121 aa25.44■■□□□ 1.66
SBNO2-204ENST00000587024 EEA1Q15075 1411 aa25.42■■□□□ 1.66
SBNO2-204ENST00000587024 ZNF777Q9ULD5 760 aaPredicted RBP25.42■■□□□ 1.66
SBNO2-204ENST00000587024 CCER1Q8TC90 406 aaPredicted RBP25.41■■□□□ 1.66
SBNO2-204ENST00000587024 UNC13AQ9UPW8 1703 aa25.4■■□□□ 1.66
SBNO2-204ENST00000587024 HMGXB3Q12766 1538 aa25.38■■□□□ 1.65
SBNO2-204ENST00000587024 ABCC8Q09428 1581 aa25.36■■□□□ 1.65
SBNO2-204ENST00000587024 NESP48681 1621 aa25.34■■□□□ 1.65
SBNO2-204ENST00000587024 CARMIL1Q5VZK9 1371 aa25.34■■□□□ 1.65
SBNO2-204ENST00000587024 KCNH8Q96L42 1107 aa25.28■■□□□ 1.64
SBNO2-204ENST00000587024 TRHP20396 242 aaPredicted RBP25.27■■□□□ 1.64
SBNO2-204ENST00000587024 OSCARQ8IYS5 282 aa25.23■■□□□ 1.63
SBNO2-204ENST00000587024 TRIM26Q12899 539 aaPredicted RBP25.21■■□□□ 1.63
SBNO2-204ENST00000587024 PLEKHD1A6NEE1 506 aa25.19■■□□□ 1.62
SBNO2-204ENST00000587024 ESF1Q9H501 851 aaKnown RBP25.19■■□□□ 1.62
SBNO2-204ENST00000587024 TRIM52Q96A61 297 aa25.18■■□□□ 1.62
SBNO2-204ENST00000587024 CFTRP13569 1480 aa25.17■■□□□ 1.62
SBNO2-204ENST00000587024 GOLGA3Q08378 1498 aa25.17■■□□□ 1.62
SBNO2-204ENST00000587024 CLIP1P30622 1438 aa25.12■■□□□ 1.61
SBNO2-204ENST00000587024 ERICH6Q7L0X2 663 aa25.11■■□□□ 1.61
SBNO2-204ENST00000587024 MRC2Q9UBG0 1479 aa25.11■■□□□ 1.61
SBNO2-204ENST00000587024 MTUS2Q5JR59 1369 aa25.08■■□□□ 1.6
SBNO2-204ENST00000587024 CARMIL2Q6F5E8 1435 aa25.05■■□□□ 1.6
SBNO2-204ENST00000587024 FGD5Q6ZNL6 1462 aa25.04■■□□□ 1.6
SBNO2-204ENST00000587024 PLPPR3Q6T4P5 718 aa25.03■■□□□ 1.6
SBNO2-204ENST00000587024 RAD54L2Q9Y4B4 1467 aa25.01■■□□□ 1.59
SBNO2-204ENST00000587024 JPH4Q96JJ6 628 aa24.98■■□□□ 1.59
SBNO2-204ENST00000587024 CYB5RLQ6IPT4 315 aa24.97■■□□□ 1.59
SBNO2-204ENST00000587024 LAMC3Q9Y6N6 1575 aa24.96■■□□□ 1.59
SBNO2-204ENST00000587024 AQRO60306 1485 aaKnown RBP eCLIP24.95■■□□□ 1.598e-7■■■■□ 22.4
SBNO2-204ENST00000587024 GAPVD1Q14C86 1478 aa24.95■■□□□ 1.58
SBNO2-204ENST00000587024 TSPY4P0CV99 314 aa24.93■■□□□ 1.58
SBNO2-204ENST00000587024 TSPY10P0CW01 314 aa24.93■■□□□ 1.58
SBNO2-204ENST00000587024 TNIKQ9UKE5 1360 aa24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms