RNA–Protein interactions for RNA: ENST00000493960.6

FAM208A-209, Transcript of family with sequence similarity 208 member A, humanhuman

APPRIS P2 TSL 5 BASIC

Gene FAM208A, Length 5,600 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM208A-209ENST00000493960 DCAF8L2P0C7V8 631 aa30.26■■■□□ 2.43
FAM208A-209ENST00000493960 NISCHQ9Y2I1 1504 aa29.17■■■□□ 2.26
FAM208A-209ENST00000493960 SUPT5HO00267 1087 aaKnown RBP28.6■■■□□ 2.17
FAM208A-209ENST00000493960 SHROOM4Q9ULL8 1493 aa28.15■■■□□ 2.1
FAM208A-209ENST00000493960 EHMT2Q96KQ7 1210 aa27.54■■■□□ 2
FAM208A-209ENST00000493960 APLP2Q06481 763 aa27.34■■□□□ 1.97
FAM208A-209ENST00000493960 FAM9AQ8IZU1 332 aaPredicted RBP27.09■■□□□ 1.93
FAM208A-209ENST00000493960 PELP1Q8IZL8 1130 aaKnown RBP26.96■■□□□ 1.91
FAM208A-209ENST00000493960 TTBK1Q5TCY1 1321 aaPredicted RBP26.62■■□□□ 1.85
FAM208A-209ENST00000493960 TRIM41Q8WV44 630 aa26.6■■□□□ 1.85
FAM208A-209ENST00000493960 RANGAP1P46060 587 aaPredicted RBP26.48■■□□□ 1.83
FAM208A-209ENST00000493960 PCGF6Q9BYE7 350 aa26.47■■□□□ 1.83
FAM208A-209ENST00000493960 ATP1B4Q9UN42 357 aaPredicted RBP26.35■■□□□ 1.81
FAM208A-209ENST00000493960 UBTFP17480 764 aaKnown RBP26.29■■□□□ 1.8
FAM208A-209ENST00000493960 ZEB1P37275 1124 aaPredicted RBP26.27■■□□□ 1.8
FAM208A-209ENST00000493960 CCER1Q8TC90 406 aaPredicted RBP26.18■■□□□ 1.78
FAM208A-209ENST00000493960 CENPBP07199 599 aaPredicted RBP26.03■■□□□ 1.76
FAM208A-209ENST00000493960 ERICH6Q7L0X2 663 aa25.72■■□□□ 1.71
FAM208A-209ENST00000493960 NEFLP07196 543 aa25.58■■□□□ 1.69
FAM208A-209ENST00000493960 PPARGC1BQ86YN6 1023 aaKnown RBP25.57■■□□□ 1.68
FAM208A-209ENST00000493960 TRIM26Q12899 539 aaPredicted RBP25.53■■□□□ 1.68
FAM208A-209ENST00000493960 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.5■■□□□ 1.67
FAM208A-209ENST00000493960 HNRNPUL2Q1KMD3 747 aaKnown RBP25.5■■□□□ 1.67
FAM208A-209ENST00000493960 MYT1LQ9UL68 1186 aa25.44■■□□□ 1.66
FAM208A-209ENST00000493960 YTHDC1Q96MU7 727 aaKnown RBP25.4■■□□□ 1.66
FAM208A-209ENST00000493960 ITGAEP38570 1179 aa25.35■■□□□ 1.65
FAM208A-209ENST00000493960 CHIC1Q5VXU3 224 aa25.31■■□□□ 1.64
FAM208A-209ENST00000493960 ABCC9O60706 1549 aa25.22■■□□□ 1.63
FAM208A-209ENST00000493960 LOC105371045A0A1W2PR82 267 aa25.22■■□□□ 1.63
FAM208A-209ENST00000493960 POLR3GLQ9BT43 218 aa25.13■■□□□ 1.61
FAM208A-209ENST00000493960 PABPN1Q86U42 306 aaKnown RBP eCLIP25.08■■□□□ 1.61
FAM208A-209ENST00000493960 HRCP23327 699 aa25.02■■□□□ 1.6
FAM208A-209ENST00000493960 FAM50AQ14320 339 aaKnown RBP24.82■■□□□ 1.56
FAM208A-209ENST00000493960 DAXXQ9UER7 740 aaPredicted RBP24.8■■□□□ 1.56
FAM208A-209ENST00000493960 CNGB1Q14028 1251 aaPredicted RBP24.75■■□□□ 1.55
FAM208A-209ENST00000493960 SLC4A1APQ9BWU0 796 aaKnown RBP24.74■■□□□ 1.55
FAM208A-209ENST00000493960 TRIM52Q96A61 297 aa24.7■■□□□ 1.54
FAM208A-209ENST00000493960 MYT1Q01538 1121 aa24.65■■□□□ 1.54
FAM208A-209ENST00000493960 FBLN2P98095 1184 aa24.55■■□□□ 1.52
FAM208A-209ENST00000493960 DIEXFQ68CQ4 756 aaKnown RBP24.52■■□□□ 1.52
FAM208A-209ENST00000493960 NEUROD1Q13562 356 aa24.48■■□□□ 1.51
FAM208A-209ENST00000493960 CLSPNQ9HAW4 1339 aa24.34■■□□□ 1.49
FAM208A-209ENST00000493960 CSRNP3Q8WYN3 585 aa24.33■■□□□ 1.49
FAM208A-209ENST00000493960 ZNF326Q5BKZ1 582 aaKnown RBP24.33■■□□□ 1.49
FAM208A-209ENST00000493960 ANP32CO43423 234 aa24.26■■□□□ 1.47
FAM208A-209ENST00000493960 SCRIBQ14160 1630 aa24.25■■□□□ 1.47
FAM208A-209ENST00000493960 P3H3Q8IVL6 736 aa24.25■■□□□ 1.47
FAM208A-209ENST00000493960 ZNF316A6NFI3 1004 aaPredicted RBP24.23■■□□□ 1.47
FAM208A-209ENST00000493960 CDK11AQ9UQ88 783 aaPredicted RBP24.18■■□□□ 1.46
FAM208A-209ENST00000493960 ARID3CA6NKF2 412 aa24.15■■□□□ 1.46
FAM208A-209ENST00000493960 ZCCHC6Q5VYS8 1495 aaKnown RBP24.13■■□□□ 1.45
FAM208A-209ENST00000493960 RTL5Q5HYW3 569 aaPredicted RBP24.1■■□□□ 1.45
FAM208A-209ENST00000493960 ZNF777Q9ULD5 760 aaPredicted RBP24.09■■□□□ 1.45
FAM208A-209ENST00000493960 BCANQ96GW7 911 aa24.04■■□□□ 1.44
FAM208A-209ENST00000493960 ZBTB47Q9UFB7 747 aaPredicted RBP24.04■■□□□ 1.44
FAM208A-209ENST00000493960 NEFMP07197 916 aa23.99■■□□□ 1.43
FAM208A-209ENST00000493960 CCDC180Q9P1Z9 1646 aa23.96■■□□□ 1.43
FAM208A-209ENST00000493960 CANXP27824 592 aaKnown RBP23.91■■□□□ 1.42
FAM208A-209ENST00000493960 ESF1Q9H501 851 aaKnown RBP23.9■■□□□ 1.42
FAM208A-209ENST00000493960 SLC24A1O60721 1099 aa23.86■■□□□ 1.41
FAM208A-209ENST00000493960 NPM1P06748 294 aaKnown RBP eCLIP23.85■■□□□ 1.41
FAM208A-209ENST00000493960 GTF3C3Q9Y5Q9 886 aa23.8■■□□□ 1.4
FAM208A-209ENST00000493960 TONSLQ96HA7 1378 aa23.79■■□□□ 1.4
FAM208A-209ENST00000493960 STAG3Q9UJ98 1225 aa23.74■■□□□ 1.39
FAM208A-209ENST00000493960 CHGAP10645 457 aaKnown RBP23.72■■□□□ 1.39
FAM208A-209ENST00000493960 RB1CC1Q8TDY2 1594 aa23.71■■□□□ 1.39
FAM208A-209ENST00000493960 DCAF1Q9Y4B6 1507 aa23.66■■□□□ 1.38
FAM208A-209ENST00000493960 BCL11AQ9H165 835 aa23.61■■□□□ 1.37
FAM208A-209ENST00000493960 CHMP7Q8WUX9 453 aaPredicted RBP23.6■■□□□ 1.37
FAM208A-209ENST00000493960 TSPY4P0CV99 314 aa23.57■■□□□ 1.36
FAM208A-209ENST00000493960 TSPY10P0CW01 314 aa23.57■■□□□ 1.36
FAM208A-209ENST00000493960 MTUS2Q5JR59 1369 aa23.57■■□□□ 1.36
FAM208A-209ENST00000493960 CHIC2Q9UKJ5 165 aa23.57■■□□□ 1.36
FAM208A-209ENST00000493960 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.53■■□□□ 1.366e-7■■□□□ 12.8
FAM208A-209ENST00000493960 ACIN1Q9UKV3 1341 aaKnown RBP23.51■■□□□ 1.35
FAM208A-209ENST00000493960 CLIP1P30622 1438 aa23.48■■□□□ 1.35
FAM208A-209ENST00000493960 PLPPR3Q6T4P5 718 aa23.48■■□□□ 1.35
FAM208A-209ENST00000493960 ANP32AP39687 249 aaKnown RBP23.47■■□□□ 1.35
FAM208A-209ENST00000493960 EEA1Q15075 1411 aa23.44■■□□□ 1.34
FAM208A-209ENST00000493960 NACADO15069 1562 aa23.43■■□□□ 1.34
FAM208A-209ENST00000493960 DDX10Q13206 875 aaKnown RBP23.42■■□□□ 1.34
FAM208A-209ENST00000493960 HNRNPUQ00839 825 aaKnown RBP eCLIP23.4■■□□□ 1.34
FAM208A-209ENST00000493960 FAM9BQ8IZU0 186 aa23.38■■□□□ 1.33
FAM208A-209ENST00000493960 RSF1Q96T23 1441 aaPredicted RBP23.37■■□□□ 1.33
FAM208A-209ENST00000493960 GOLGA3Q08378 1498 aa23.36■■□□□ 1.33
FAM208A-209ENST00000493960 BAZ1BQ9UIG0 1483 aaKnown RBP23.35■■□□□ 1.33
FAM208A-209ENST00000493960 TMC1Q8TDI8 760 aa23.34■■□□□ 1.33
FAM208A-209ENST00000493960 KDM2AQ9Y2K7 1162 aa23.33■■□□□ 1.33
FAM208A-209ENST00000493960 FKBP8Q14318 412 aa23.31■■□□□ 1.32
FAM208A-209ENST00000493960 WDR43Q15061 677 aaKnown RBP eCLIP23.3■■□□□ 1.32
FAM208A-209ENST00000493960 PLEKHD1A6NEE1 506 aa23.29■■□□□ 1.32
FAM208A-209ENST00000493960 NPM2Q86SE8 214 aaKnown RBP23.29■■□□□ 1.32
FAM208A-209ENST00000493960 WRNQ14191 1432 aaPredicted RBP eCLIP23.29■■□□□ 1.32
FAM208A-209ENST00000493960 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.27■■□□□ 1.32
FAM208A-209ENST00000493960 UPF2Q9HAU5 1272 aaKnown RBP23.26■■□□□ 1.31
FAM208A-209ENST00000493960 KIF27Q86VH2 1401 aa23.23■■□□□ 1.31
FAM208A-209ENST00000493960 RRP7BPQ9NSQ0 103 aa23.23■■□□□ 1.31
FAM208A-209ENST00000493960 SALL2Q9Y467 1007 aaPredicted RBP23.23■■□□□ 1.31
FAM208A-209ENST00000493960 KCNH8Q96L42 1107 aa23.22■■□□□ 1.31
FAM208A-209ENST00000493960 CEP162Q5TB80 1403 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms