RNA–Protein interactions for RNA: ENST00000523965.5

SORBS3-221, Transcript of sorbin and SH3 domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene SORBS3, Length 2,028 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORBS3-221ENST00000523965 NISCHQ9Y2I1 1504 aa43.04■■■■■ 4.48
SORBS3-221ENST00000523965 CCDC180Q9P1Z9 1646 aa37.74■■■■□ 3.63
SORBS3-221ENST00000523965 ABCC9O60706 1549 aa36.11■■■■□ 3.37
SORBS3-221ENST00000523965 ZCCHC6Q5VYS8 1495 aaKnown RBP36.09■■■■□ 3.37
SORBS3-221ENST00000523965 DCAF8L2P0C7V8 631 aa35.69■■■■□ 3.3
SORBS3-221ENST00000523965 DCAF1Q9Y4B6 1507 aa35.52■■■■□ 3.28
SORBS3-221ENST00000523965 MYO15BQ96JP2 1530 aa35.24■■■■□ 3.23
SORBS3-221ENST00000523965 NACADO15069 1562 aa35.2■■■■□ 3.23
SORBS3-221ENST00000523965 RB1CC1Q8TDY2 1594 aa35.03■■■■□ 3.2
SORBS3-221ENST00000523965 SHROOM4Q9ULL8 1493 aa34.9■■■■□ 3.18
SORBS3-221ENST00000523965 SCRIBQ14160 1630 aa34.72■■■■□ 3.15
SORBS3-221ENST00000523965 UNC13AQ9UPW8 1703 aa34.46■■■■□ 3.11
SORBS3-221ENST00000523965 BICRAQ9NZM4 1560 aa34.04■■■■□ 3.04
SORBS3-221ENST00000523965 PABPN1Q86U42 306 aaKnown RBP eCLIP33.96■■■■□ 3.034e-7■■■□□ 16.2
SORBS3-221ENST00000523965 CECR2Q9BXF3 1484 aa33.53■■■□□ 2.96
SORBS3-221ENST00000523965 SUPT5HO00267 1087 aaKnown RBP33.31■■■□□ 2.92
SORBS3-221ENST00000523965 MROH2BQ7Z745 1585 aa33.28■■■□□ 2.92
SORBS3-221ENST00000523965 BAZ1AQ9NRL2 1556 aaPredicted RBP33.26■■■□□ 2.91
SORBS3-221ENST00000523965 RSF1Q96T23 1441 aaPredicted RBP33.22■■■□□ 2.91
SORBS3-221ENST00000523965 SMARCA4P51532 1647 aa33.22■■■□□ 2.91
SORBS3-221ENST00000523965 EIF4G1Q04637 1599 aaKnown RBP33.04■■■□□ 2.88
SORBS3-221ENST00000523965 WIZO95785 1651 aa33.03■■■□□ 2.88
SORBS3-221ENST00000523965 PEG3Q9GZU2 1588 aa32.78■■■□□ 2.84
SORBS3-221ENST00000523965 ATAD2BQ9ULI0 1458 aa32.73■■■□□ 2.83
SORBS3-221ENST00000523965 SMARCA2P51531 1590 aa32.68■■■□□ 2.82
SORBS3-221ENST00000523965 CC2D2AQ9P2K1 1620 aa32.67■■■□□ 2.82
SORBS3-221ENST00000523965 TOP2AP11388 1531 aaKnown RBP32.6■■■□□ 2.81
SORBS3-221ENST00000523965 BAZ1BQ9UIG0 1483 aaKnown RBP32.54■■■□□ 2.8
SORBS3-221ENST00000523965 NCAPD3P42695 1498 aa32.48■■■□□ 2.79
SORBS3-221ENST00000523965 HMGXB3Q12766 1538 aa32.44■■■□□ 2.78
SORBS3-221ENST00000523965 DNAJC5BQ9UF47 199 aa32.29■■■□□ 2.76
SORBS3-221ENST00000523965 CCDC88BA6NC98 1476 aa32.26■■■□□ 2.75
SORBS3-221ENST00000523965 CFTRP13569 1480 aa31.67■■■□□ 2.66
SORBS3-221ENST00000523965 CADPSQ9ULU8 1353 aa31.63■■■□□ 2.65
SORBS3-221ENST00000523965 CHIC1Q5VXU3 224 aa31.62■■■□□ 2.65
SORBS3-221ENST00000523965 NESP48681 1621 aa31.6■■■□□ 2.65
SORBS3-221ENST00000523965 PRDM2Q13029 1718 aa31.58■■■□□ 2.65
SORBS3-221ENST00000523965 ABCC8Q09428 1581 aa31.54■■■□□ 2.64
SORBS3-221ENST00000523965 LAMC3Q9Y6N6 1575 aa31.48■■■□□ 2.63
SORBS3-221ENST00000523965 FANCD2Q9BXW9 1451 aa31.32■■■□□ 2.6
SORBS3-221ENST00000523965 TRIM41Q8WV44 630 aa31.29■■■□□ 2.6
SORBS3-221ENST00000523965 WRNQ14191 1432 aaPredicted RBP eCLIP31.28■■■□□ 2.6
SORBS3-221ENST00000523965 SYNJ1O43426 1573 aa31.25■■■□□ 2.59
SORBS3-221ENST00000523965 KIF21AQ7Z4S6 1674 aa31.25■■■□□ 2.59
SORBS3-221ENST00000523965 PDS5BQ9NTI5 1447 aa31.2■■■□□ 2.59
SORBS3-221ENST00000523965 CEP164Q9UPV0 1460 aa31.16■■■□□ 2.58
SORBS3-221ENST00000523965 CUX1P39880 1505 aa31.14■■■□□ 2.58
SORBS3-221ENST00000523965 HRCP23327 699 aa31.11■■■□□ 2.57
SORBS3-221ENST00000523965 TOP2BQ02880 1626 aa31.1■■■□□ 2.57
SORBS3-221ENST00000523965 BIVM-ERCC5R4GMW8 1640 aa31.09■■■□□ 2.57
SORBS3-221ENST00000523965 URB2Q14146 1524 aaKnown RBP30.98■■■□□ 2.55
SORBS3-221ENST00000523965 ERCC6Q03468 1493 aa30.97■■■□□ 2.55
SORBS3-221ENST00000523965 DNMBPQ6XZF7 1577 aa30.96■■■□□ 2.55
SORBS3-221ENST00000523965 TOPBP1Q92547 1522 aa30.94■■■□□ 2.54
SORBS3-221ENST00000523965 MRC2Q9UBG0 1479 aa30.88■■■□□ 2.53
SORBS3-221ENST00000523965 FGD5Q6ZNL6 1462 aa30.86■■■□□ 2.53
SORBS3-221ENST00000523965 THOC2Q8NI27 1593 aaKnown RBP30.81■■■□□ 2.52
SORBS3-221ENST00000523965 SOGA1O94964 1423 aa30.8■■■□□ 2.52
SORBS3-221ENST00000523965 FAM9AQ8IZU1 332 aaPredicted RBP30.79■■■□□ 2.52
SORBS3-221ENST00000523965 POLA1P09884 1462 aaPredicted RBP30.78■■■□□ 2.52
SORBS3-221ENST00000523965 WDR62O43379 1518 aa30.75■■■□□ 2.51
SORBS3-221ENST00000523965 RUSC2Q8N2Y8 1516 aa30.74■■■□□ 2.51
SORBS3-221ENST00000523965 RAD54L2Q9Y4B4 1467 aa30.69■■■□□ 2.5
SORBS3-221ENST00000523965 CUX2O14529 1486 aa30.57■■■□□ 2.48
SORBS3-221ENST00000523965 WDR97A6NE52 1622 aa30.56■■■□□ 2.48
SORBS3-221ENST00000523965 TARBP1Q13395 1621 aaKnown RBP30.54■■■□□ 2.48
SORBS3-221ENST00000523965 ABCA10Q8WWZ4 1543 aa30.54■■■□□ 2.48
SORBS3-221ENST00000523965 EEA1Q15075 1411 aa30.52■■■□□ 2.48
SORBS3-221ENST00000523965 PCGF6Q9BYE7 350 aa30.52■■■□□ 2.48
SORBS3-221ENST00000523965 KIF27Q86VH2 1401 aa30.49■■■□□ 2.47
SORBS3-221ENST00000523965 LOC105371045A0A1W2PR82 267 aa30.44■■■□□ 2.46
SORBS3-221ENST00000523965 EHMT2Q96KQ7 1210 aa30.44■■■□□ 2.46
SORBS3-221ENST00000523965 CSRNP3Q8WYN3 585 aa30.43■■■□□ 2.46
SORBS3-221ENST00000523965 IFT140Q96RY7 1462 aa30.4■■■□□ 2.46
SORBS3-221ENST00000523965 TDRD9Q8NDG6 1382 aaKnown RBP30.4■■■□□ 2.46
SORBS3-221ENST00000523965 ABCA5Q8WWZ7 1642 aa30.38■■■□□ 2.45
SORBS3-221ENST00000523965 ZNF608Q9ULD9 1512 aaPredicted RBP30.35■■■□□ 2.45
SORBS3-221ENST00000523965 AQRO60306 1485 aaKnown RBP eCLIP30.29■■■□□ 2.449e-7■■■□□ 16.9
SORBS3-221ENST00000523965 GAPVD1Q14C86 1478 aa30.29■■■□□ 2.44
SORBS3-221ENST00000523965 IGF1RP08069 1367 aa30.27■■■□□ 2.44
SORBS3-221ENST00000523965 EIF4G3O43432 1585 aaKnown RBP30.26■■■□□ 2.43
SORBS3-221ENST00000523965 KIF21BO75037 1637 aa30.25■■■□□ 2.43
SORBS3-221ENST00000523965 PBRM1Q86U86 1689 aa30.24■■■□□ 2.43
SORBS3-221ENST00000523965 PRXQ9BXM0 1461 aa30.21■■■□□ 2.43
SORBS3-221ENST00000523965 RAPGEF2Q9Y4G8 1499 aa30.2■■■□□ 2.42
SORBS3-221ENST00000523965 PPARGC1BQ86YN6 1023 aaKnown RBP30.19■■■□□ 2.42
SORBS3-221ENST00000523965 ERICH3Q5RHP9 1530 aa30.17■■■□□ 2.42
SORBS3-221ENST00000523965 GOLGA3Q08378 1498 aa30.16■■■□□ 2.42
SORBS3-221ENST00000523965 CUL7Q14999 1698 aa30.12■■■□□ 2.41
SORBS3-221ENST00000523965 CARMIL1Q5VZK9 1371 aa30.11■■■□□ 2.41
SORBS3-221ENST00000523965 GRIN2BQ13224 1484 aa30.1■■■□□ 2.41
SORBS3-221ENST00000523965 UBTFP17480 764 aaKnown RBP30.03■■■□□ 2.4
SORBS3-221ENST00000523965 ADAMTS12P58397 1594 aa30.02■■■□□ 2.4
SORBS3-221ENST00000523965 SNAPC4Q5SXM2 1469 aa30.01■■■□□ 2.39
SORBS3-221ENST00000523965 TRIM26Q12899 539 aaPredicted RBP29.95■■■□□ 2.38
SORBS3-221ENST00000523965 TNIKQ9UKE5 1360 aa29.94■■■□□ 2.38
SORBS3-221ENST00000523965 FHAD1B1AJZ9 1412 aa29.93■■■□□ 2.38
SORBS3-221ENST00000523965 MAGI1Q96QZ7 1491 aaPredicted RBP29.9■■■□□ 2.38
SORBS3-221ENST00000523965 CEP162Q5TB80 1403 aa29.82■■■□□ 2.36
SORBS3-221ENST00000523965 SYNJ2O15056 1496 aa29.79■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms