Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CHD5Q8TDI0 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHD5Q8TDI0 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHD5Q8TDI0 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.59■■□□□ 1.05
CHD5Q8TDI0 AC006015.1-201ENST00000429970 570 ntBASIC21.59■■□□□ 1.05
CHD5Q8TDI0 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.59■■□□□ 1.05
CHD5Q8TDI0 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHD5Q8TDI0 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHD5Q8TDI0 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CHD5Q8TDI0 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.58■■□□□ 1.05
CHD5Q8TDI0 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
CHD5Q8TDI0 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CHD5Q8TDI0 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
CHD5Q8TDI0 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.58■■□□□ 1.05
CHD5Q8TDI0 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.58■■□□□ 1.05
CHD5Q8TDI0 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
CHD5Q8TDI0 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CHD5Q8TDI0 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CHD5Q8TDI0 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.58■■□□□ 1.05
CHD5Q8TDI0 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CHD5Q8TDI0 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
CHD5Q8TDI0 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.58■■□□□ 1.05
CHD5Q8TDI0 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.58■■□□□ 1.05
CHD5Q8TDI0 MYCNOS-205ENST00000641950 531 ntBASIC21.58■■□□□ 1.05
CHD5Q8TDI0 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CHD5Q8TDI0 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CHD5Q8TDI0 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.58■■□□□ 1.05
CHD5Q8TDI0 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
CHD5Q8TDI0 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CHD5Q8TDI0 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CHD5Q8TDI0 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHD5Q8TDI0 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CHD5Q8TDI0 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.57■■□□□ 1.04
CHD5Q8TDI0 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.57■■□□□ 1.04
CHD5Q8TDI0 MFSD11-216ENST00000590393 1141 ntBASIC21.57■■□□□ 1.04
CHD5Q8TDI0 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.57■■□□□ 1.04
CHD5Q8TDI0 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHD5Q8TDI0 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHD5Q8TDI0 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.57■■□□□ 1.04
CHD5Q8TDI0 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
CHD5Q8TDI0 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
CHD5Q8TDI0 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHD5Q8TDI0 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CHD5Q8TDI0 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.57■■□□□ 1.04
CHD5Q8TDI0 CNN2P6-201ENST00000439038 900 ntBASIC21.57■■□□□ 1.04
CHD5Q8TDI0 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.57■■□□□ 1.04
CHD5Q8TDI0 AC092666.2-201ENST00000613287 246 ntBASIC21.57■■□□□ 1.04
CHD5Q8TDI0 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.57■■□□□ 1.04
CHD5Q8TDI0 KRT16P2-201ENST00000414673 1423 ntBASIC21.57■■□□□ 1.04
CHD5Q8TDI0 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHD5Q8TDI0 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CHD5Q8TDI0 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.57■■□□□ 1.04
CHD5Q8TDI0 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CHD5Q8TDI0 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHD5Q8TDI0 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.57■■□□□ 1.04
CHD5Q8TDI0 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHD5Q8TDI0 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CHD5Q8TDI0 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CHD5Q8TDI0 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CHD5Q8TDI0 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CHD5Q8TDI0 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CHD5Q8TDI0 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CHD5Q8TDI0 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
CHD5Q8TDI0 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CHD5Q8TDI0 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.56■■□□□ 1.04
CHD5Q8TDI0 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
CHD5Q8TDI0 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.56■■□□□ 1.04
CHD5Q8TDI0 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CHD5Q8TDI0 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.56■■□□□ 1.04
CHD5Q8TDI0 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CHD5Q8TDI0 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CHD5Q8TDI0 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CHD5Q8TDI0 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.56■■□□□ 1.04
CHD5Q8TDI0 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CHD5Q8TDI0 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
CHD5Q8TDI0 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
CHD5Q8TDI0 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CHD5Q8TDI0 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHD5Q8TDI0 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.55■■□□□ 1.04
CHD5Q8TDI0 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHD5Q8TDI0 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.55■■□□□ 1.04
CHD5Q8TDI0 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.55■■□□□ 1.04
CHD5Q8TDI0 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHD5Q8TDI0 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
CHD5Q8TDI0 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHD5Q8TDI0 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHD5Q8TDI0 LINC00565-201ENST00000562710 2331 ntBASIC21.55■■□□□ 1.04
CHD5Q8TDI0 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CHD5Q8TDI0 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CHD5Q8TDI0 KRT18P11-201ENST00000435214 1283 ntBASIC21.54■■□□□ 1.04
CHD5Q8TDI0 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.54■■□□□ 1.04
CHD5Q8TDI0 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.54■■□□□ 1.04
CHD5Q8TDI0 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CHD5Q8TDI0 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.54■■□□□ 1.04
CHD5Q8TDI0 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
CHD5Q8TDI0 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CHD5Q8TDI0 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.54■■□□□ 1.04
CHD5Q8TDI0 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CHD5Q8TDI0 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.54■■□□□ 1.04
CHD5Q8TDI0 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms