Protein–RNA interactions for Protein: P0C2J1

TY1B-PR3, Transposon Ty1-PR3 Gag-Pol polyprotein, yeastyeast

Known RBP Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-PR3P0C2J1 YAL065CYAL065C 387 nt2.92□□□□□ -1.94
TY1B-PR3P0C2J1 YJL016WYJL016W 1686 nt2.91□□□□□ -1.94
TY1B-PR3P0C2J1 STU1YBL034C 4542 nt2.91□□□□□ -1.94
TY1B-PR3P0C2J1 MGT1YDL200C 567 nt2.91□□□□□ -1.94
TY1B-PR3P0C2J1 YGL132WYGL132W 336 nt2.91□□□□□ -1.94
TY1B-PR3P0C2J1 RCE1YMR274C 948 nt2.91□□□□□ -1.94
TY1B-PR3P0C2J1 MAK21YDR060W 3078 nt2.9□□□□□ -1.94
TY1B-PR3P0C2J1 YHR086W-AYHR086W-A 162 nt2.9□□□□□ -1.94
TY1B-PR3P0C2J1 ATP3YBR039W 936 nt2.9□□□□□ -1.94
TY1B-PR3P0C2J1 TDA3YHR009C 1572 nt2.9□□□□□ -1.94
TY1B-PR3P0C2J1 LAA1YJL207C 6045 nt2.9□□□□□ -1.95
TY1B-PR3P0C2J1 STT4YLR305C 5703 nt2.9□□□□□ -1.95
TY1B-PR3P0C2J1 ERG9YHR190W 1335 nt2.9□□□□□ -1.95
TY1B-PR3P0C2J1 CUS1YMR240C 1311 nt2.9□□□□□ -1.95
TY1B-PR3P0C2J1 RPS31YLR167W 459 nt2.89□□□□□ -1.95
TY1B-PR3P0C2J1 GTR1YML121W 933 nt2.89□□□□□ -1.95
TY1B-PR3P0C2J1 MDV1YJL112W 2145 nt2.89□□□□□ -1.95
TY1B-PR3P0C2J1 SRS2YJL092W 3525 nt2.88□□□□□ -1.95
TY1B-PR3P0C2J1 CAT8YMR280C 4302 nt2.88□□□□□ -1.95
TY1B-PR3P0C2J1 MIX14YDR031W 366 nt2.88□□□□□ -1.95
TY1B-PR3P0C2J1 YPR147CYPR147C 915 nt2.88□□□□□ -1.95
TY1B-PR3P0C2J1 MSH3YCR092C 3057 nt2.88□□□□□ -1.95
TY1B-PR3P0C2J1 REH1YLR387C 1299 nt2.87□□□□□ -1.95
TY1B-PR3P0C2J1 YNR071CYNR071C 1029 nt2.87□□□□□ -1.95
TY1B-PR3P0C2J1 RPC40YPR110C 1008 nt2.87□□□□□ -1.95
TY1B-PR3P0C2J1 YBR197CYBR197C 654 nt2.87□□□□□ -1.95
TY1B-PR3P0C2J1 BSD2YBR290W 966 nt2.87□□□□□ -1.95
TY1B-PR3P0C2J1 VPH1YOR270C 2523 nt2.86□□□□□ -1.95
TY1B-PR3P0C2J1 MIF2YKL089W 1650 nt2.86□□□□□ -1.95
TY1B-PR3P0C2J1 YJL147CYJL147C 1149 nt2.86□□□□□ -1.95
TY1B-PR3P0C2J1 BOS1YLR078C 735 nt2.86□□□□□ -1.95
TY1B-PR3P0C2J1 YLR326WYLR326W 723 nt2.86□□□□□ -1.95
TY1B-PR3P0C2J1 ADI1YMR009W 540 nt2.86□□□□□ -1.95
TY1B-PR3P0C2J1 COA6YMR244C-A 315 nt2.86□□□□□ -1.95
TY1B-PR3P0C2J1 NUF2YOL069W 1356 nt2.86□□□□□ -1.95
TY1B-PR3P0C2J1 SXM1YDR395W 2835 nt2.86□□□□□ -1.95
TY1B-PR3P0C2J1 YHR073W-AYHR073W-A 177 nt2.85□□□□□ -1.95
TY1B-PR3P0C2J1 PEX17YNL214W 600 nt2.85□□□□□ -1.95
TY1B-PR3P0C2J1 SLD7YOR060C 774 nt2.85□□□□□ -1.95
TY1B-PR3P0C2J1 MMS1YPR164W 4224 nt2.85□□□□□ -1.95
TY1B-PR3P0C2J1 TPD3YAL016W 1908 nt2.85□□□□□ -1.95
TY1B-PR3P0C2J1 TOF1YNL273W 3717 nt2.85□□□□□ -1.95
TY1B-PR3P0C2J1 YJR039WYJR039W 3366 nt2.84□□□□□ -1.95
TY1B-PR3P0C2J1 ALO1YML086C 1581 nt2.84□□□□□ -1.95
TY1B-PR3P0C2J1 MDS3YGL197W 4464 nt2.84□□□□□ -1.95
TY1B-PR3P0C2J1 YCR013CYCR013C 648 nt2.84□□□□□ -1.96
TY1B-PR3P0C2J1 YEL018C-AYEL018C-A 534 nt2.84□□□□□ -1.96
TY1B-PR3P0C2J1 ELO3YLR372W 1038 nt2.84□□□□□ -1.96
TY1B-PR3P0C2J1 ESC1YMR219W 4977 nt2.84□□□□□ -1.96
TY1B-PR3P0C2J1 CBP1YJL209W 1965 nt2.83□□□□□ -1.96
TY1B-PR3P0C2J1 BRR6YGL247W 594 nt2.83□□□□□ -1.96
TY1B-PR3P0C2J1 YOR333CYOR333C 417 nt2.83□□□□□ -1.96
TY1B-PR3P0C2J1 MGR3YMR115W 1506 nt2.83□□□□□ -1.96
TY1B-PR3P0C2J1 SKI3YPR189W 4299 nt2.83□□□□□ -1.96
TY1B-PR3P0C2J1 JSN1YJR091C 3276 nt2.83□□□□□ -1.96
TY1B-PR3P0C2J1 YDR131CYDR131C 1671 nt2.83□□□□□ -1.96
TY1B-PR3P0C2J1 NFI1YOR156C 2181 nt2.83□□□□□ -1.96
TY1B-PR3P0C2J1 TFC1YBR123C 1950 nt2.82□□□□□ -1.96
TY1B-PR3P0C2J1 TIF35YDR429C 825 nt2.82□□□□□ -1.96
TY1B-PR3P0C2J1 SPS4YOR313C 1017 nt2.82□□□□□ -1.96
TY1B-PR3P0C2J1 SAS4YDR181C 1446 nt2.82□□□□□ -1.96
TY1B-PR3P0C2J1 SMP1YBR182C 1359 nt2.82□□□□□ -1.96
TY1B-PR3P0C2J1 TTI1YKL033W 3117 nt2.82□□□□□ -1.96
TY1B-PR3P0C2J1 CYC1YJR048W 330 nt2.82□□□□□ -1.96
TY1B-PR3P0C2J1 YDR089WYDR089W 2610 nt2.82□□□□□ -1.96
TY1B-PR3P0C2J1 ALY1YKR021W 2748 nt2.81□□□□□ -1.96
TY1B-PR3P0C2J1 TRM13YOL125W 1431 nt2.81□□□□□ -1.96
TY1B-PR3P0C2J1 JID1YPR061C 906 nt2.81□□□□□ -1.96
TY1B-PR3P0C2J1 YMR310CYMR310C 954 nt2.8□□□□□ -1.96
TY1B-PR3P0C2J1 DOT6YER088C 2013 nt2.8□□□□□ -1.96
TY1B-PR3P0C2J1 SET1YHR119W 3243 nt2.79□□□□□ -1.96
TY1B-PR3P0C2J1 SET6YPL165C 1122 nt2.79□□□□□ -1.96
TY1B-PR3P0C2J1 STH1YIL126W 4080 nt2.79□□□□□ -1.96
TY1B-PR3P0C2J1 YDL162CYDL162C 357 nt2.79□□□□□ -1.96
TY1B-PR3P0C2J1 PET191YJR034W 327 nt2.79□□□□□ -1.96
TY1B-PR3P0C2J1 SLH1YGR271W 5904 nt2.78□□□□□ -1.96
TY1B-PR3P0C2J1 COS4YFL062W 1140 nt2.78□□□□□ -1.96
TY1B-PR3P0C2J1 BCS1YDR375C 1371 nt2.78□□□□□ -1.96
TY1B-PR3P0C2J1 GIS1YDR096W 2685 nt2.78□□□□□ -1.96
TY1B-PR3P0C2J1 YEL043WYEL043W 2871 nt2.77□□□□□ -1.97
TY1B-PR3P0C2J1 EXO84YBR102C 2262 nt2.77□□□□□ -1.97
TY1B-PR3P0C2J1 GUK1YDR454C 564 nt2.77□□□□□ -1.97
TY1B-PR3P0C2J1 ADK2YER170W 678 nt2.77□□□□□ -1.97
TY1B-PR3P0C2J1 SOL3YHR163W 750 nt2.77□□□□□ -1.97
TY1B-PR3P0C2J1 VAM10YOR068C 345 nt2.77□□□□□ -1.97
TY1B-PR3P0C2J1 ARF3YOR094W 552 nt2.77□□□□□ -1.97
TY1B-PR3P0C2J1 YKR078WYKR078W 1758 nt2.77□□□□□ -1.97
TY1B-PR3P0C2J1 PSR1YLL010C 1284 nt2.76□□□□□ -1.97
TY1B-PR3P0C2J1 MEI5YPL121C 669 nt2.76□□□□□ -1.97
TY1B-PR3P0C2J1 PSK1YAL017W 4071 nt2.76□□□□□ -1.97
TY1B-PR3P0C2J1 CDC55YGL190C 1581 nt2.76□□□□□ -1.97
TY1B-PR3P0C2J1 MSH6YDR097C 3729 nt2.75□□□□□ -1.97
TY1B-PR3P0C2J1 YER165C-AYER165C-A 357 nt2.75□□□□□ -1.97
TY1B-PR3P0C2J1 MIH1YMR036C 1665 nt2.74□□□□□ -1.97
TY1B-PR3P0C2J1 SEN54YPL083C 1404 nt2.74□□□□□ -1.97
TY1B-PR3P0C2J1 ECM7YLR443W 1347 nt2.74□□□□□ -1.97
TY1B-PR3P0C2J1 YIR040CYIR040C 333 nt2.74□□□□□ -1.97
TY1B-PR3P0C2J1 RGA1YOR127W 3024 nt2.74□□□□□ -1.97
TY1B-PR3P0C2J1 VPS34YLR240W 2628 nt2.74□□□□□ -1.97
TY1B-PR3P0C2J1 YOR238WYOR238W 912 nt2.74□□□□□ -1.97
Retrieved 100 of 7,029 protein–RNA pairs in 21.4 ms