RNA–Protein interactions for RNA: YOL125W

TRM13, Transcript of 2'-O-methyltransferase, yeastyeast

Gene TRM13, Length 1,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM13YOL125W MTC1P47018 478 aaKnown RBP13.54□□□□□ -0.24
TRM13YOL125W FAP1P53971 965 aa12.6□□□□□ -0.39
TRM13YOL125W DRS1P32892 752 aaKnown RBP12.39□□□□□ -0.43
TRM13YOL125W PRY3P47033 881 aa11.85□□□□□ -0.51
TRM13YOL125W PRI1P10363 409 aa11.59□□□□□ -0.55
TRM13YOL125W AAD16Q02895 342 aa11.57□□□□□ -0.56
TRM13YOL125W ISW2Q08773 1120 aa11.29□□□□□ -0.6
TRM13YOL125W RPG1P38249 964 aaKnown RBP11.23□□□□□ -0.61
TRM13YOL125W YCK3P39962 524 aa11.14□□□□□ -0.63
TRM13YOL125W HAA1Q12753 694 aaKnown RBP11.04□□□□□ -0.64
TRM13YOL125W TSR3Q12094 313 aaKnown RBP11□□□□□ -0.65
TRM13YOL125W DIP2Q12220 943 aaPredicted RBP10.97□□□□□ -0.65
TRM13YOL125W BFR2Q06631 534 aaKnown RBP10.78□□□□□ -0.68
TRM13YOL125W RSE1Q04693 1361 aaKnown RBP10.66□□□□□ -0.7
TRM13YOL125W MRPL32P25348 183 aa10.53□□□□□ -0.72
TRM13YOL125W TFA1P36100 482 aa10.5□□□□□ -0.73
TRM13YOL125W AVT3P36062 692 aa10.45□□□□□ -0.74
TRM13YOL125W RPL17AP05740 184 aaKnown RBP10.37□□□□□ -0.75
TRM13YOL125W RPL17BP46990 184 aaKnown RBP10.37□□□□□ -0.75
TRM13YOL125W REB1P21538 810 aa10.35□□□□□ -0.75
TRM13YOL125W YGL015CP33199 130 aa10.17□□□□□ -0.78
TRM13YOL125W CDC27P38042 758 aa9.96□□□□□ -0.82
TRM13YOL125W SPT21P35209 758 aa9.85□□□□□ -0.83
TRM13YOL125W YKR023WP36119 530 aaKnown RBP9.85□□□□□ -0.83
TRM13YOL125W HOP09932 586 aa9.69□□□□□ -0.86
TRM13YOL125W MAP2P38174 421 aaKnown RBP9.68□□□□□ -0.86
TRM13YOL125W DCD1P06773 312 aa9.67□□□□□ -0.86
TRM13YOL125W UBP10P53874 792 aaPredicted RBP9.65□□□□□ -0.87
TRM13YOL125W TFC8Q12308 588 aa9.64□□□□□ -0.87
TRM13YOL125W RIM101P33400 625 aa9.46□□□□□ -0.9
TRM13YOL125W SCY1P53009 804 aa9.44□□□□□ -0.9
TRM13YOL125W BUD31P25337 157 aaPredicted RBP9.43□□□□□ -0.9
TRM13YOL125W RQC2Q12532 1038 aaKnown RBP9.43□□□□□ -0.9
TRM13YOL125W BCH2P36122 765 aa9.33□□□□□ -0.92
TRM13YOL125W SLX5P32828 619 aaKnown RBP9.31□□□□□ -0.92
TRM13YOL125W TIF4632P39936 914 aaKnown RBP9.28□□□□□ -0.92
TRM13YOL125W TGL3P40308 642 aa9.23□□□□□ -0.93
TRM13YOL125W OXP1P28273 1286 aa9.16□□□□□ -0.94
TRM13YOL125W EPS1P40557 701 aa9.06□□□□□ -0.96
TRM13YOL125W UBP9P39967 754 aa9.05□□□□□ -0.96
TRM13YOL125W BDF1P35817 686 aa9.05□□□□□ -0.96
TRM13YOL125W PTP3P40048 928 aa9.04□□□□□ -0.96
TRM13YOL125W YIL055CP40523 627 aaKnown RBP9.04□□□□□ -0.96
TRM13YOL125W SIS1P25294 352 aaKnown RBP8.99□□□□□ -0.97
TRM13YOL125W RSM7P47150 247 aa8.88□□□□□ -0.99
TRM13YOL125W YAH1Q12184 172 aaKnown RBP8.88□□□□□ -0.99
TRM13YOL125W DMA1P38823 416 aa8.87□□□□□ -0.99
TRM13YOL125W BBC1P47068 1157 aa8.84□□□□□ -0.99
TRM13YOL125W AI2P03876 854 aa8.83□□□□□ -1
TRM13YOL125W MST1P07236 462 aa8.8□□□□□ -1
TRM13YOL125W YOR238WQ08634 303 aa8.8□□□□□ -1
TRM13YOL125W YBL029C-AQ3E756 94 aa8.76□□□□□ -1.01
TRM13YOL125W YLR271WQ06152 274 aa8.69□□□□□ -1.02
TRM13YOL125W NSR1P27476 414 aaKnown RBP RIP-Chip data8.68□□□□□ -1.02not detected
TRM13YOL125W YAP5P40574 245 aa8.68□□□□□ -1.02
TRM13YOL125W SSP1P38871 571 aa8.65□□□□□ -1.02
TRM13YOL125W VNX1P42839 908 aa8.63□□□□□ -1.03
TRM13YOL125W WSC3Q12215 556 aa8.61□□□□□ -1.03
TRM13YOL125W SPP1Q03012 353 aa8.57□□□□□ -1.04
TRM13YOL125W PSD2P53037 1138 aaKnown RBP8.56□□□□□ -1.04
TRM13YOL125W GTT3P39996 337 aa8.52□□□□□ -1.05
TRM13YOL125W PIB1Q06651 286 aa8.52□□□□□ -1.05
TRM13YOL125W MRM1P25270 412 aa8.51□□□□□ -1.05
TRM13YOL125W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.46□□□□□ -1.06not detected
TRM13YOL125W TIF11P38912 153 aaKnown RBP8.45□□□□□ -1.06
TRM13YOL125W TAF7Q05021 590 aa8.41□□□□□ -1.06
TRM13YOL125W CST9Q06032 482 aa8.37□□□□□ -1.07
TRM13YOL125W AIR2Q12476 344 aaKnown RBP8.37□□□□□ -1.07
TRM13YOL125W ULI1P43604 169 aa8.36□□□□□ -1.07
TRM13YOL125W FKH1P40466 484 aa8.34□□□□□ -1.07
TRM13YOL125W YJL171CP46992 396 aa8.34□□□□□ -1.07
TRM13YOL125W LDB19Q12502 818 aa8.33□□□□□ -1.08
TRM13YOL125W LEO1P38439 464 aa8.32□□□□□ -1.08
TRM13YOL125W VPS29P38759 282 aa8.31□□□□□ -1.08
TRM13YOL125W IOC2Q12072 812 aa8.31□□□□□ -1.08
TRM13YOL125W DBP1P24784 617 aaKnown RBP8.3□□□□□ -1.08
TRM13YOL125W MGA2P40578 1113 aa8.3□□□□□ -1.08
TRM13YOL125W YFR006WP43590 535 aa8.29□□□□□ -1.08
TRM13YOL125W YMR1P47147 688 aaKnown RBP RIP-Chip data8.29□□□□□ -1.08not detected
TRM13YOL125W RTG3P38165 486 aa8.29□□□□□ -1.08
TRM13YOL125W SET4P42948 560 aa8.27□□□□□ -1.09
TRM13YOL125W YOL036WQ08206 761 aa8.24□□□□□ -1.09
TRM13YOL125W MSB4Q12317 492 aa8.24□□□□□ -1.09
TRM13YOL125W STS1P38637 319 aa8.23□□□□□ -1.09
TRM13YOL125W EAP1P36041 632 aaKnown RBP8.21□□□□□ -1.09
TRM13YOL125W RCR1P38212 213 aa8.21□□□□□ -1.09
TRM13YOL125W SAS10Q12136 610 aaPredicted RBP8.2□□□□□ -1.1
TRM13YOL125W TRP5P00931 707 aaKnown RBP8.2□□□□□ -1.1
TRM13YOL125W VMA1P17255 1071 aaKnown RBP8.2□□□□□ -1.1
TRM13YOL125W BMT6Q12291 365 aa8.19□□□□□ -1.1
TRM13YOL125W RTG1P32607 177 aa8.17□□□□□ -1.1
TRM13YOL125W NCR1Q12200 1170 aa8.13□□□□□ -1.11
TRM13YOL125W SAM3Q08986 587 aa8.12□□□□□ -1.11
TRM13YOL125W LEU3P08638 886 aa8.12□□□□□ -1.11
TRM13YOL125W YNL035CP53962 389 aaKnown RBP8.1□□□□□ -1.11
TRM13YOL125W SEC61P32915 480 aa8.06□□□□□ -1.12
TRM13YOL125W GYP5Q12344 894 aa8.03□□□□□ -1.12
TRM13YOL125W DCW1P36091 449 aa8.01□□□□□ -1.13
TRM13YOL125W TFG1P41895 735 aaPredicted RBP7.99□□□□□ -1.13
TRM13YOL125W DAN4P47179 1161 aa7.98□□□□□ -1.13
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms