RNA–Protein interactions for RNA: YMR274C

RCE1, Transcript of Type II CAAX prenyl protease, yeastyeast

Gene RCE1, Length 948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RCE1YMR274C MTC1P47018 478 aaKnown RBP18.35■□□□□ 0.53
RCE1YMR274C DRS1P32892 752 aaKnown RBP17.3■□□□□ 0.36
RCE1YMR274C FAP1P53971 965 aa16.44■□□□□ 0.22
RCE1YMR274C PRY3P47033 881 aa15.42■□□□□ 0.06
RCE1YMR274C PRI1P10363 409 aa15.41■□□□□ 0.06
RCE1YMR274C AAD16Q02895 342 aa15.32■□□□□ 0.04
RCE1YMR274C ISW2Q08773 1120 aa15.21■□□□□ 0.03
RCE1YMR274C DIP2Q12220 943 aaPredicted RBP15.13■□□□□ 0.01
RCE1YMR274C RPG1P38249 964 aaKnown RBP15.06■□□□□ 0
RCE1YMR274C TSR3Q12094 313 aaKnown RBP14.59□□□□□ -0.07
RCE1YMR274C RSE1Q04693 1361 aaKnown RBP14.59□□□□□ -0.07
RCE1YMR274C AVT3P36062 692 aa14.58□□□□□ -0.08
RCE1YMR274C YCK3P39962 524 aa14.5□□□□□ -0.09
RCE1YMR274C HAA1Q12753 694 aaKnown RBP14.46□□□□□ -0.09
RCE1YMR274C BFR2Q06631 534 aaKnown RBP14.44□□□□□ -0.1
RCE1YMR274C RPL17AP05740 184 aaKnown RBP14.11□□□□□ -0.15
RCE1YMR274C RPL17BP46990 184 aaKnown RBP14.11□□□□□ -0.15
RCE1YMR274C REB1P21538 810 aa14.06□□□□□ -0.16
RCE1YMR274C MRPL32P25348 183 aa14.03□□□□□ -0.16
RCE1YMR274C SPT21P35209 758 aa13.46□□□□□ -0.25
RCE1YMR274C YGL015CP33199 130 aa13.42□□□□□ -0.26
RCE1YMR274C YKR023WP36119 530 aaKnown RBP13.32□□□□□ -0.28
RCE1YMR274C CDC27P38042 758 aa13.32□□□□□ -0.28
RCE1YMR274C HOP09932 586 aa13.07□□□□□ -0.32
RCE1YMR274C RIM101P33400 625 aa13.05□□□□□ -0.32
RCE1YMR274C TFC8Q12308 588 aa13.04□□□□□ -0.32
RCE1YMR274C DCD1P06773 312 aa13.01□□□□□ -0.33
RCE1YMR274C UBP10P53874 792 aaPredicted RBP12.91□□□□□ -0.34
RCE1YMR274C MAP2P38174 421 aaKnown RBP12.9□□□□□ -0.34
RCE1YMR274C TFA1P36100 482 aa12.77□□□□□ -0.37
RCE1YMR274C SCY1P53009 804 aa12.68□□□□□ -0.38
RCE1YMR274C BCH2P36122 765 aa12.64□□□□□ -0.39
RCE1YMR274C OXP1P28273 1286 aa12.62□□□□□ -0.39
RCE1YMR274C SLX5P32828 619 aaKnown RBP12.5□□□□□ -0.41
RCE1YMR274C YIL055CP40523 627 aaKnown RBP12.49□□□□□ -0.41
RCE1YMR274C PTP3P40048 928 aa12.46□□□□□ -0.41
RCE1YMR274C TIF4632P39936 914 aaKnown RBP12.42□□□□□ -0.42
RCE1YMR274C TGL3P40308 642 aa12.35□□□□□ -0.43
RCE1YMR274C EPS1P40557 701 aa12.33□□□□□ -0.44
RCE1YMR274C YAH1Q12184 172 aaKnown RBP12.31□□□□□ -0.44
RCE1YMR274C BDF1P35817 686 aa12.28□□□□□ -0.44
RCE1YMR274C RSM7P47150 247 aa12.27□□□□□ -0.45
RCE1YMR274C BUD31P25337 157 aaPredicted RBP12.2□□□□□ -0.46
RCE1YMR274C BBC1P47068 1157 aa12.16□□□□□ -0.46
RCE1YMR274C AI2P03876 854 aa12.14□□□□□ -0.47
RCE1YMR274C YLR271WQ06152 274 aa12.08□□□□□ -0.48
RCE1YMR274C SSP1P38871 571 aa11.96□□□□□ -0.49
RCE1YMR274C UBP9P39967 754 aa11.96□□□□□ -0.49
RCE1YMR274C ARP8Q12386 881 aaKnown RBP RIP-Chip data11.9□□□□□ -0.5not detected
RCE1YMR274C PSD2P53037 1138 aaKnown RBP11.86□□□□□ -0.51
RCE1YMR274C YOR238WQ08634 303 aa11.84□□□□□ -0.51
RCE1YMR274C MST1P07236 462 aa11.82□□□□□ -0.52
RCE1YMR274C NSR1P27476 414 aaKnown RBP RIP-Chip data11.79□□□□□ -0.52not detected
RCE1YMR274C YAP5P40574 245 aa11.77□□□□□ -0.53
RCE1YMR274C MRM1P25270 412 aa11.72□□□□□ -0.53
RCE1YMR274C SIS1P25294 352 aaKnown RBP11.68□□□□□ -0.54
RCE1YMR274C MGA2P40578 1113 aa11.66□□□□□ -0.54
RCE1YMR274C CST9Q06032 482 aa11.65□□□□□ -0.54
RCE1YMR274C YBL029C-AQ3E756 94 aa11.64□□□□□ -0.55
RCE1YMR274C PIB1Q06651 286 aa11.53□□□□□ -0.56
RCE1YMR274C VNX1P42839 908 aa11.52□□□□□ -0.57
RCE1YMR274C WSC3Q12215 556 aa11.52□□□□□ -0.57
RCE1YMR274C GTT3P39996 337 aa11.51□□□□□ -0.57
RCE1YMR274C RTG3P38165 486 aa11.48□□□□□ -0.57
RCE1YMR274C SPP1Q03012 353 aa11.45□□□□□ -0.58
RCE1YMR274C VPS29P38759 282 aa11.44□□□□□ -0.58
RCE1YMR274C YMR1P47147 688 aaKnown RBP RIP-Chip data11.42□□□□□ -0.58not detected
RCE1YMR274C DBP1P24784 617 aaKnown RBP11.38□□□□□ -0.59
RCE1YMR274C RCR1P38212 213 aa11.36□□□□□ -0.59
RCE1YMR274C YFR006WP43590 535 aa11.35□□□□□ -0.59
RCE1YMR274C TIF11P38912 153 aaKnown RBP11.33□□□□□ -0.6
RCE1YMR274C STS1P38637 319 aa11.3□□□□□ -0.6
RCE1YMR274C ULI1P43604 169 aa11.23□□□□□ -0.61
RCE1YMR274C VMA1P17255 1071 aaKnown RBP11.22□□□□□ -0.61
RCE1YMR274C SET4P42948 560 aa11.2□□□□□ -0.62
RCE1YMR274C MSB4Q12317 492 aa11.2□□□□□ -0.62
RCE1YMR274C YOL036WQ08206 761 aa11.19□□□□□ -0.62
RCE1YMR274C IOC2Q12072 812 aa11.16□□□□□ -0.62
RCE1YMR274C LDB19Q12502 818 aa11.16□□□□□ -0.62
RCE1YMR274C EAP1P36041 632 aaKnown RBP11.15□□□□□ -0.62
RCE1YMR274C SAM3Q08986 587 aa11.13□□□□□ -0.63
RCE1YMR274C AIR2Q12476 344 aaKnown RBP11.11□□□□□ -0.63
RCE1YMR274C FKH1P40466 484 aa11.1□□□□□ -0.63
RCE1YMR274C TRP5P00931 707 aaKnown RBP11.07□□□□□ -0.64
RCE1YMR274C RAM2P29703 316 aa11.06□□□□□ -0.64
RCE1YMR274C YJL171CP46992 396 aa11.06□□□□□ -0.64
RCE1YMR274C GYP5Q12344 894 aa11.02□□□□□ -0.65
RCE1YMR274C MAK11P20484 414 aaKnown RBP11□□□□□ -0.65
RCE1YMR274C RTG1P32607 177 aa11□□□□□ -0.65
RCE1YMR274C MIF2P35201 549 aa10.97□□□□□ -0.65
RCE1YMR274C YNL035CP53962 389 aaKnown RBP10.95□□□□□ -0.66
RCE1YMR274C ABP1P15891 592 aaKnown RBP10.94□□□□□ -0.66
RCE1YMR274C DCW1P36091 449 aa10.94□□□□□ -0.66
RCE1YMR274C NCR1Q12200 1170 aa10.93□□□□□ -0.66
RCE1YMR274C BMT6Q12291 365 aa10.91□□□□□ -0.66
RCE1YMR274C HTA1P04911 132 aaKnown RBP10.9□□□□□ -0.66
RCE1YMR274C HTA2P04912 132 aa10.9□□□□□ -0.66
RCE1YMR274C SEC61P32915 480 aa10.89□□□□□ -0.67
RCE1YMR274C EDS1P38073 919 aa10.88□□□□□ -0.67
RCE1YMR274C GRE2Q12068 342 aaKnown RBP10.88□□□□□ -0.67
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms