Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
LDB2O43679 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LDB2O43679 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.25■□□□□ 0.99
LDB2O43679 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LDB2O43679 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
LDB2O43679 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
LDB2O43679 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LDB2O43679 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
LDB2O43679 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LDB2O43679 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.24■□□□□ 0.99
LDB2O43679 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LDB2O43679 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LDB2O43679 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.24■□□□□ 0.99
LDB2O43679 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.24■□□□□ 0.99
LDB2O43679 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.24■□□□□ 0.99
LDB2O43679 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.24■□□□□ 0.99
LDB2O43679 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.24■□□□□ 0.99
LDB2O43679 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.24■□□□□ 0.99
LDB2O43679 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LDB2O43679 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
LDB2O43679 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.23■□□□□ 0.99
LDB2O43679 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
LDB2O43679 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
LDB2O43679 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.23■□□□□ 0.99
LDB2O43679 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LDB2O43679 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LDB2O43679 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
LDB2O43679 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.23■□□□□ 0.99
LDB2O43679 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
LDB2O43679 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LDB2O43679 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.23■□□□□ 0.99
LDB2O43679 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
LDB2O43679 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.23■□□□□ 0.99
LDB2O43679 AL137060.1-201ENST00000618151 2648 ntBASIC21.23■□□□□ 0.99
LDB2O43679 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.22■□□□□ 0.99
LDB2O43679 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
LDB2O43679 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LDB2O43679 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
LDB2O43679 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
LDB2O43679 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
LDB2O43679 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
LDB2O43679 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LDB2O43679 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LDB2O43679 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.22■□□□□ 0.99
LDB2O43679 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.22■□□□□ 0.99
LDB2O43679 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LDB2O43679 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.22■□□□□ 0.99
LDB2O43679 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.22■□□□□ 0.99
LDB2O43679 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
LDB2O43679 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.22■□□□□ 0.99
LDB2O43679 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LDB2O43679 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LDB2O43679 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
LDB2O43679 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LDB2O43679 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.21■□□□□ 0.99
LDB2O43679 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.21■□□□□ 0.99
LDB2O43679 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LDB2O43679 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LDB2O43679 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LDB2O43679 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.21■□□□□ 0.99
LDB2O43679 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LDB2O43679 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.21■□□□□ 0.99
LDB2O43679 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
LDB2O43679 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.21■□□□□ 0.99
LDB2O43679 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LDB2O43679 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.21■□□□□ 0.99
LDB2O43679 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.2■□□□□ 0.99
LDB2O43679 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.2■□□□□ 0.98
LDB2O43679 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
LDB2O43679 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LDB2O43679 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
LDB2O43679 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LDB2O43679 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
LDB2O43679 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
LDB2O43679 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
LDB2O43679 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LDB2O43679 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
LDB2O43679 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
LDB2O43679 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
LDB2O43679 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LDB2O43679 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LDB2O43679 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LDB2O43679 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
LDB2O43679 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LDB2O43679 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LDB2O43679 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LDB2O43679 FEM1AP4-201ENST00000443167 1987 ntBASIC21.19■□□□□ 0.98
LDB2O43679 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LDB2O43679 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LDB2O43679 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LDB2O43679 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LDB2O43679 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.19■□□□□ 0.98
LDB2O43679 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.19■□□□□ 0.98
LDB2O43679 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.19■□□□□ 0.98
LDB2O43679 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
LDB2O43679 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.19■□□□□ 0.98
LDB2O43679 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LDB2O43679 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LDB2O43679 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.19■□□□□ 0.98
LDB2O43679 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms