Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
NDUFA1O15239 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC14.47□□□□□ -0.09
NDUFA1O15239 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NDUFA1O15239 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
NDUFA1O15239 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
NDUFA1O15239 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
NDUFA1O15239 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NDUFA1O15239 AC104564.3-201ENST00000582367 638 ntBASIC14.47□□□□□ -0.09
NDUFA1O15239 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC14.47□□□□□ -0.09
NDUFA1O15239 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NDUFA1O15239 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NDUFA1O15239 AC009102.2-201ENST00000606772 1639 ntBASIC14.47□□□□□ -0.09
NDUFA1O15239 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC14.47□□□□□ -0.09
NDUFA1O15239 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
NDUFA1O15239 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
NDUFA1O15239 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NDUFA1O15239 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NDUFA1O15239 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC14.46□□□□□ -0.09
NDUFA1O15239 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NDUFA1O15239 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
NDUFA1O15239 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NDUFA1O15239 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
NDUFA1O15239 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
NDUFA1O15239 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NDUFA1O15239 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
NDUFA1O15239 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NDUFA1O15239 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
NDUFA1O15239 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NDUFA1O15239 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NDUFA1O15239 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
NDUFA1O15239 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
NDUFA1O15239 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC14.46□□□□□ -0.09
NDUFA1O15239 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
NDUFA1O15239 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC14.46□□□□□ -0.1
NDUFA1O15239 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
NDUFA1O15239 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
NDUFA1O15239 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
NDUFA1O15239 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
NDUFA1O15239 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
NDUFA1O15239 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
NDUFA1O15239 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC14.45□□□□□ -0.1
NDUFA1O15239 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NDUFA1O15239 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC14.45□□□□□ -0.1
NDUFA1O15239 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
NDUFA1O15239 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NDUFA1O15239 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NDUFA1O15239 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC14.45□□□□□ -0.1
NDUFA1O15239 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC14.45□□□□□ -0.1
NDUFA1O15239 TSPY9P-201ENST00000440215 945 ntBASIC14.45□□□□□ -0.1
NDUFA1O15239 TSPY11P-201ENST00000442607 1045 ntBASIC14.45□□□□□ -0.1
NDUFA1O15239 AC239859.2-201ENST00000444165 318 ntBASIC14.45□□□□□ -0.1
NDUFA1O15239 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NDUFA1O15239 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NDUFA1O15239 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC14.45□□□□□ -0.1
NDUFA1O15239 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NDUFA1O15239 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NDUFA1O15239 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
NDUFA1O15239 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
NDUFA1O15239 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC14.44□□□□□ -0.1
NDUFA1O15239 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NDUFA1O15239 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NDUFA1O15239 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
NDUFA1O15239 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC14.44□□□□□ -0.1
NDUFA1O15239 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC14.44□□□□□ -0.1
NDUFA1O15239 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
NDUFA1O15239 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC14.44□□□□□ -0.1
NDUFA1O15239 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
NDUFA1O15239 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NDUFA1O15239 AC004687.1-201ENST00000579003 1625 ntBASIC14.44□□□□□ -0.1
NDUFA1O15239 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NDUFA1O15239 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
NDUFA1O15239 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
NDUFA1O15239 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
NDUFA1O15239 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
NDUFA1O15239 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NDUFA1O15239 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NDUFA1O15239 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NDUFA1O15239 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NDUFA1O15239 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NDUFA1O15239 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NDUFA1O15239 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NDUFA1O15239 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
NDUFA1O15239 HES6-204ENST00000409182 863 ntTSL 2 BASIC14.43□□□□□ -0.1
NDUFA1O15239 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC14.43□□□□□ -0.1
NDUFA1O15239 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NDUFA1O15239 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NDUFA1O15239 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
NDUFA1O15239 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NDUFA1O15239 MFF-203ENST00000349901 1716 ntTSL 2 BASIC14.43□□□□□ -0.1
NDUFA1O15239 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NDUFA1O15239 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NDUFA1O15239 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NDUFA1O15239 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
NDUFA1O15239 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
NDUFA1O15239 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
NDUFA1O15239 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NDUFA1O15239 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
NDUFA1O15239 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
NDUFA1O15239 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NDUFA1O15239 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms