Protein–RNA interactions for Protein: Q9NX63

CHCHD3, MICOS complex subunit MIC19, humanhuman

Known RBP Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3Q9NX63 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHCHD3Q9NX63 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CHCHD3Q9NX63 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHCHD3Q9NX63 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC19.65■□□□□ 0.74
CHCHD3Q9NX63 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.65■□□□□ 0.74
CHCHD3Q9NX63 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHCHD3Q9NX63 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHCHD3Q9NX63 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.65■□□□□ 0.74
CHCHD3Q9NX63 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CHCHD3Q9NX63 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.65■□□□□ 0.74
CHCHD3Q9NX63 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.65■□□□□ 0.74
CHCHD3Q9NX63 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.65■□□□□ 0.74
CHCHD3Q9NX63 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHCHD3Q9NX63 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.65■□□□□ 0.74
CHCHD3Q9NX63 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
CHCHD3Q9NX63 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
CHCHD3Q9NX63 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.74
CHCHD3Q9NX63 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHCHD3Q9NX63 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.64■□□□□ 0.73
CHCHD3Q9NX63 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.64■□□□□ 0.73
CHCHD3Q9NX63 AC139795.1-202ENST00000500444 432 ntBASIC19.64■□□□□ 0.73
CHCHD3Q9NX63 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC19.64■□□□□ 0.73
CHCHD3Q9NX63 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.64■□□□□ 0.73
CHCHD3Q9NX63 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CHCHD3Q9NX63 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHCHD3Q9NX63 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHCHD3Q9NX63 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHCHD3Q9NX63 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHCHD3Q9NX63 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHCHD3Q9NX63 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHCHD3Q9NX63 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHCHD3Q9NX63 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHCHD3Q9NX63 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHCHD3Q9NX63 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.63■□□□□ 0.73
CHCHD3Q9NX63 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHCHD3Q9NX63 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CHCHD3Q9NX63 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHCHD3Q9NX63 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.63■□□□□ 0.73
CHCHD3Q9NX63 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHCHD3Q9NX63 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHCHD3Q9NX63 AC120024.1-201ENST00000562672 995 ntBASIC19.63■□□□□ 0.73
CHCHD3Q9NX63 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CHCHD3Q9NX63 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.63■□□□□ 0.73
CHCHD3Q9NX63 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHCHD3Q9NX63 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CHCHD3Q9NX63 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHCHD3Q9NX63 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.63■□□□□ 0.73
CHCHD3Q9NX63 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.63■□□□□ 0.73
CHCHD3Q9NX63 AF131216.4-201ENST00000638924 1588 ntBASIC19.62■□□□□ 0.73
CHCHD3Q9NX63 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.62■□□□□ 0.73
CHCHD3Q9NX63 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.62■□□□□ 0.73
CHCHD3Q9NX63 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CHCHD3Q9NX63 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHCHD3Q9NX63 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHCHD3Q9NX63 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC19.62■□□□□ 0.73
CHCHD3Q9NX63 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHCHD3Q9NX63 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHCHD3Q9NX63 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHCHD3Q9NX63 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHCHD3Q9NX63 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CHCHD3Q9NX63 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHCHD3Q9NX63 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CHCHD3Q9NX63 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.62■□□□□ 0.73
CHCHD3Q9NX63 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHCHD3Q9NX63 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.61■□□□□ 0.73
CHCHD3Q9NX63 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHCHD3Q9NX63 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHCHD3Q9NX63 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHCHD3Q9NX63 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CHCHD3Q9NX63 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC19.61■□□□□ 0.73
CHCHD3Q9NX63 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHCHD3Q9NX63 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHCHD3Q9NX63 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHCHD3Q9NX63 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.61■□□□□ 0.73
CHCHD3Q9NX63 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.61■□□□□ 0.73
CHCHD3Q9NX63 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHCHD3Q9NX63 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CHCHD3Q9NX63 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
CHCHD3Q9NX63 AC120498.9-201ENST00000339021 3867 ntBASIC19.61■□□□□ 0.73
CHCHD3Q9NX63 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CHCHD3Q9NX63 LINC01960-201ENST00000563759 1884 ntBASIC19.6■□□□□ 0.73
CHCHD3Q9NX63 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.6■□□□□ 0.73
CHCHD3Q9NX63 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHCHD3Q9NX63 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHCHD3Q9NX63 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CHCHD3Q9NX63 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CHCHD3Q9NX63 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CHCHD3Q9NX63 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
CHCHD3Q9NX63 LINC01529-204ENST00000636474 1715 ntBASIC19.6■□□□□ 0.73
CHCHD3Q9NX63 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHCHD3Q9NX63 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.6■□□□□ 0.73
CHCHD3Q9NX63 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHCHD3Q9NX63 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHCHD3Q9NX63 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.6■□□□□ 0.73
CHCHD3Q9NX63 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHCHD3Q9NX63 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.6■□□□□ 0.73
CHCHD3Q9NX63 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CHCHD3Q9NX63 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHCHD3Q9NX63 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.59■□□□□ 0.73
CHCHD3Q9NX63 AC244015.2-201ENST00000616358 1861 ntBASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms