Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AK1-201ENST00000223836 736 ntTSL 3 BASIC23.75■■□□□ 1.39
BLOC1S4Q9NUP1 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC23.75■■□□□ 1.39
BLOC1S4Q9NUP1 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
BLOC1S4Q9NUP1 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC23.75■■□□□ 1.39
BLOC1S4Q9NUP1 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
BLOC1S4Q9NUP1 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC23.75■■□□□ 1.39
BLOC1S4Q9NUP1 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
BLOC1S4Q9NUP1 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
BLOC1S4Q9NUP1 Z98882.1-201ENST00000622160 2253 ntBASIC23.75■■□□□ 1.39
BLOC1S4Q9NUP1 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
BLOC1S4Q9NUP1 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
BLOC1S4Q9NUP1 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
BLOC1S4Q9NUP1 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
BLOC1S4Q9NUP1 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
BLOC1S4Q9NUP1 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC23.74■■□□□ 1.39
BLOC1S4Q9NUP1 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC23.74■■□□□ 1.39
BLOC1S4Q9NUP1 CPT2-209ENST00000636935 803 ntTSL 5 BASIC23.74■■□□□ 1.39
BLOC1S4Q9NUP1 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
BLOC1S4Q9NUP1 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
BLOC1S4Q9NUP1 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
BLOC1S4Q9NUP1 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
BLOC1S4Q9NUP1 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
BLOC1S4Q9NUP1 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC23.74■■□□□ 1.39
BLOC1S4Q9NUP1 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
BLOC1S4Q9NUP1 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
BLOC1S4Q9NUP1 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC23.73■■□□□ 1.39
BLOC1S4Q9NUP1 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
BLOC1S4Q9NUP1 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
BLOC1S4Q9NUP1 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
BLOC1S4Q9NUP1 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC23.73■■□□□ 1.39
BLOC1S4Q9NUP1 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
BLOC1S4Q9NUP1 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC23.73■■□□□ 1.39
BLOC1S4Q9NUP1 SP2-202ENST00000613139 908 ntTSL 5 BASIC23.73■■□□□ 1.39
BLOC1S4Q9NUP1 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
BLOC1S4Q9NUP1 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC23.73■■□□□ 1.39
BLOC1S4Q9NUP1 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
BLOC1S4Q9NUP1 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
BLOC1S4Q9NUP1 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
BLOC1S4Q9NUP1 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC23.73■■□□□ 1.39
BLOC1S4Q9NUP1 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
BLOC1S4Q9NUP1 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC23.73■■□□□ 1.39
BLOC1S4Q9NUP1 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
BLOC1S4Q9NUP1 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
BLOC1S4Q9NUP1 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC23.72■■□□□ 1.39
BLOC1S4Q9NUP1 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC23.72■■□□□ 1.39
BLOC1S4Q9NUP1 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC23.72■■□□□ 1.39
BLOC1S4Q9NUP1 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC23.72■■□□□ 1.39
BLOC1S4Q9NUP1 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
BLOC1S4Q9NUP1 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC23.72■■□□□ 1.39
BLOC1S4Q9NUP1 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
BLOC1S4Q9NUP1 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
BLOC1S4Q9NUP1 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
BLOC1S4Q9NUP1 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
BLOC1S4Q9NUP1 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
BLOC1S4Q9NUP1 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
BLOC1S4Q9NUP1 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
BLOC1S4Q9NUP1 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
BLOC1S4Q9NUP1 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
BLOC1S4Q9NUP1 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
BLOC1S4Q9NUP1 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC23.71■■□□□ 1.39
BLOC1S4Q9NUP1 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC23.71■■□□□ 1.39
BLOC1S4Q9NUP1 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
BLOC1S4Q9NUP1 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
BLOC1S4Q9NUP1 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC23.71■■□□□ 1.39
BLOC1S4Q9NUP1 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
BLOC1S4Q9NUP1 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC23.71■■□□□ 1.39
BLOC1S4Q9NUP1 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
BLOC1S4Q9NUP1 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC23.7■■□□□ 1.39
BLOC1S4Q9NUP1 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC23.7■■□□□ 1.38
BLOC1S4Q9NUP1 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
BLOC1S4Q9NUP1 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC23.7■■□□□ 1.38
BLOC1S4Q9NUP1 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
BLOC1S4Q9NUP1 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
BLOC1S4Q9NUP1 LGR4-203ENST00000480977 492 ntTSL 2 BASIC23.7■■□□□ 1.38
BLOC1S4Q9NUP1 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC23.7■■□□□ 1.38
BLOC1S4Q9NUP1 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC23.7■■□□□ 1.38
BLOC1S4Q9NUP1 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC23.7■■□□□ 1.38
BLOC1S4Q9NUP1 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC23.7■■□□□ 1.38
BLOC1S4Q9NUP1 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
BLOC1S4Q9NUP1 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC23.69■■□□□ 1.38
BLOC1S4Q9NUP1 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
BLOC1S4Q9NUP1 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
BLOC1S4Q9NUP1 AC123595.1-201ENST00000440769 1046 ntBASIC23.69■■□□□ 1.38
BLOC1S4Q9NUP1 YBX1P1-201ENST00000445822 960 ntBASIC23.69■■□□□ 1.38
BLOC1S4Q9NUP1 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
BLOC1S4Q9NUP1 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
BLOC1S4Q9NUP1 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC23.69■■□□□ 1.38
BLOC1S4Q9NUP1 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC23.69■■□□□ 1.38
BLOC1S4Q9NUP1 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC23.69■■□□□ 1.38
BLOC1S4Q9NUP1 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
BLOC1S4Q9NUP1 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
BLOC1S4Q9NUP1 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC23.69■■□□□ 1.38
BLOC1S4Q9NUP1 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
BLOC1S4Q9NUP1 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
BLOC1S4Q9NUP1 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC23.68■■□□□ 1.38
BLOC1S4Q9NUP1 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
BLOC1S4Q9NUP1 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
BLOC1S4Q9NUP1 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
BLOC1S4Q9NUP1 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
BLOC1S4Q9NUP1 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC23.68■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms