Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TTC9CQ8N5M4 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TTC9CQ8N5M4 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC16.81■□□□□ 0.28
TTC9CQ8N5M4 MFF-208ENST00000409616 1247 ntTSL 5 BASIC16.81■□□□□ 0.28
TTC9CQ8N5M4 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC16.81■□□□□ 0.28
TTC9CQ8N5M4 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TTC9CQ8N5M4 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TTC9CQ8N5M4 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TTC9CQ8N5M4 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TTC9CQ8N5M4 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC16.81■□□□□ 0.28
TTC9CQ8N5M4 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TTC9CQ8N5M4 AP006587.3-201ENST00000525742 1516 ntBASIC16.8■□□□□ 0.28
TTC9CQ8N5M4 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TTC9CQ8N5M4 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TTC9CQ8N5M4 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TTC9CQ8N5M4 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC16.8■□□□□ 0.28
TTC9CQ8N5M4 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TTC9CQ8N5M4 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TTC9CQ8N5M4 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC16.8■□□□□ 0.28
TTC9CQ8N5M4 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC16.8■□□□□ 0.28
TTC9CQ8N5M4 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TTC9CQ8N5M4 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
TTC9CQ8N5M4 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC16.8■□□□□ 0.28
TTC9CQ8N5M4 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC16.8■□□□□ 0.28
TTC9CQ8N5M4 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TTC9CQ8N5M4 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
TTC9CQ8N5M4 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TTC9CQ8N5M4 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TTC9CQ8N5M4 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC16.8■□□□□ 0.28
TTC9CQ8N5M4 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC16.8■□□□□ 0.28
TTC9CQ8N5M4 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TTC9CQ8N5M4 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC16.79■□□□□ 0.28
TTC9CQ8N5M4 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
TTC9CQ8N5M4 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TTC9CQ8N5M4 ME2-206ENST00000638410 2289 ntTSL 5 BASIC16.79■□□□□ 0.28
TTC9CQ8N5M4 ME2-210ENST00000639255 2262 ntTSL 5 BASIC16.79■□□□□ 0.28
TTC9CQ8N5M4 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC16.79■□□□□ 0.28
TTC9CQ8N5M4 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TTC9CQ8N5M4 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TTC9CQ8N5M4 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC16.79■□□□□ 0.28
TTC9CQ8N5M4 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TTC9CQ8N5M4 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TTC9CQ8N5M4 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TTC9CQ8N5M4 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TTC9CQ8N5M4 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TTC9CQ8N5M4 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC16.78■□□□□ 0.28
TTC9CQ8N5M4 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TTC9CQ8N5M4 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TTC9CQ8N5M4 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC16.78■□□□□ 0.28
TTC9CQ8N5M4 BX005040.4-201ENST00000637145 1518 ntBASIC16.78■□□□□ 0.28
TTC9CQ8N5M4 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TTC9CQ8N5M4 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TTC9CQ8N5M4 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TTC9CQ8N5M4 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC16.77■□□□□ 0.28
TTC9CQ8N5M4 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TTC9CQ8N5M4 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TTC9CQ8N5M4 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
TTC9CQ8N5M4 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TTC9CQ8N5M4 HYI-206ENST00000372434 1025 ntTSL 5 BASIC16.77■□□□□ 0.28
TTC9CQ8N5M4 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TTC9CQ8N5M4 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC16.77■□□□□ 0.28
TTC9CQ8N5M4 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TTC9CQ8N5M4 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
TTC9CQ8N5M4 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC16.77■□□□□ 0.28
TTC9CQ8N5M4 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC16.77■□□□□ 0.28
TTC9CQ8N5M4 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC16.77■□□□□ 0.28
TTC9CQ8N5M4 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TTC9CQ8N5M4 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC16.77■□□□□ 0.28
TTC9CQ8N5M4 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
TTC9CQ8N5M4 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
TTC9CQ8N5M4 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TTC9CQ8N5M4 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
TTC9CQ8N5M4 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC16.77■□□□□ 0.27
TTC9CQ8N5M4 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TTC9CQ8N5M4 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TTC9CQ8N5M4 AC003102.1-202ENST00000563394 1796 ntBASIC16.77■□□□□ 0.27
TTC9CQ8N5M4 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TTC9CQ8N5M4 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TTC9CQ8N5M4 MPST-204ENST00000404393 1329 ntTSL 5 BASIC16.76■□□□□ 0.27
TTC9CQ8N5M4 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TTC9CQ8N5M4 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
TTC9CQ8N5M4 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC16.76■□□□□ 0.27
TTC9CQ8N5M4 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
TTC9CQ8N5M4 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
TTC9CQ8N5M4 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TTC9CQ8N5M4 MIR638-201ENST00000385237 100 ntBASIC16.76■□□□□ 0.27
TTC9CQ8N5M4 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC16.76■□□□□ 0.27
TTC9CQ8N5M4 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
TTC9CQ8N5M4 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC16.76■□□□□ 0.27
TTC9CQ8N5M4 AC012414.1-201ENST00000556676 535 ntBASIC16.76■□□□□ 0.27
TTC9CQ8N5M4 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC16.76■□□□□ 0.27
TTC9CQ8N5M4 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TTC9CQ8N5M4 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC16.76■□□□□ 0.27
TTC9CQ8N5M4 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
TTC9CQ8N5M4 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TTC9CQ8N5M4 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
TTC9CQ8N5M4 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
TTC9CQ8N5M4 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TTC9CQ8N5M4 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC16.75■□□□□ 0.27
TTC9CQ8N5M4 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms