Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SNAP47Q5SQN1 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SNAP47Q5SQN1 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SNAP47Q5SQN1 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.62■□□□□ 0.89
SNAP47Q5SQN1 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.62■□□□□ 0.89
SNAP47Q5SQN1 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
SNAP47Q5SQN1 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SNAP47Q5SQN1 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SNAP47Q5SQN1 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SNAP47Q5SQN1 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SNAP47Q5SQN1 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SNAP47Q5SQN1 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SNAP47Q5SQN1 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.61■□□□□ 0.89
SNAP47Q5SQN1 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.61■□□□□ 0.89
SNAP47Q5SQN1 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
SNAP47Q5SQN1 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SNAP47Q5SQN1 AP001160.3-201ENST00000601484 763 ntBASIC20.61■□□□□ 0.89
SNAP47Q5SQN1 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
SNAP47Q5SQN1 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SNAP47Q5SQN1 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SNAP47Q5SQN1 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SNAP47Q5SQN1 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SNAP47Q5SQN1 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SNAP47Q5SQN1 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SNAP47Q5SQN1 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SNAP47Q5SQN1 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.6■□□□□ 0.89
SNAP47Q5SQN1 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.6■□□□□ 0.89
SNAP47Q5SQN1 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SNAP47Q5SQN1 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.6■□□□□ 0.89
SNAP47Q5SQN1 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.6■□□□□ 0.89
SNAP47Q5SQN1 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.6■□□□□ 0.89
SNAP47Q5SQN1 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
SNAP47Q5SQN1 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SNAP47Q5SQN1 UBE2DNL-204ENST00000602536 740 ntBASIC20.6■□□□□ 0.89
SNAP47Q5SQN1 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.6■□□□□ 0.89
SNAP47Q5SQN1 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.6■□□□□ 0.89
SNAP47Q5SQN1 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.59■□□□□ 0.89
SNAP47Q5SQN1 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SNAP47Q5SQN1 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SNAP47Q5SQN1 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.59■□□□□ 0.89
SNAP47Q5SQN1 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SNAP47Q5SQN1 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
SNAP47Q5SQN1 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.59■□□□□ 0.89
SNAP47Q5SQN1 MFSD11-216ENST00000590393 1141 ntBASIC20.59■□□□□ 0.89
SNAP47Q5SQN1 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SNAP47Q5SQN1 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
SNAP47Q5SQN1 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SNAP47Q5SQN1 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.59■□□□□ 0.89
SNAP47Q5SQN1 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.58■□□□□ 0.89
SNAP47Q5SQN1 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.58■□□□□ 0.89
SNAP47Q5SQN1 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SNAP47Q5SQN1 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.58■□□□□ 0.89
SNAP47Q5SQN1 MIR663A-201ENST00000385250 93 ntBASIC20.58■□□□□ 0.89
SNAP47Q5SQN1 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.58■□□□□ 0.89
SNAP47Q5SQN1 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.58■□□□□ 0.89
SNAP47Q5SQN1 CROCCP5-201ENST00000436658 830 ntBASIC20.58■□□□□ 0.89
SNAP47Q5SQN1 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.58■□□□□ 0.89
SNAP47Q5SQN1 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.58■□□□□ 0.89
SNAP47Q5SQN1 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.58■□□□□ 0.89
SNAP47Q5SQN1 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.58■□□□□ 0.89
SNAP47Q5SQN1 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.58■□□□□ 0.89
SNAP47Q5SQN1 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SNAP47Q5SQN1 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.58■□□□□ 0.89
SNAP47Q5SQN1 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.58■□□□□ 0.89
SNAP47Q5SQN1 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
SNAP47Q5SQN1 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SNAP47Q5SQN1 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SNAP47Q5SQN1 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
SNAP47Q5SQN1 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SNAP47Q5SQN1 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
SNAP47Q5SQN1 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
SNAP47Q5SQN1 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SNAP47Q5SQN1 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SNAP47Q5SQN1 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SNAP47Q5SQN1 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.57■□□□□ 0.88
SNAP47Q5SQN1 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.57■□□□□ 0.88
SNAP47Q5SQN1 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.57■□□□□ 0.88
SNAP47Q5SQN1 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SNAP47Q5SQN1 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.57■□□□□ 0.88
SNAP47Q5SQN1 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.57■□□□□ 0.88
SNAP47Q5SQN1 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.57■□□□□ 0.88
SNAP47Q5SQN1 AL034346.1-201ENST00000568244 1277 ntBASIC20.57■□□□□ 0.88
SNAP47Q5SQN1 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
SNAP47Q5SQN1 AC087742.1-201ENST00000575880 1738 ntBASIC20.57■□□□□ 0.88
SNAP47Q5SQN1 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.57■□□□□ 0.88
SNAP47Q5SQN1 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.57■□□□□ 0.88
SNAP47Q5SQN1 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
SNAP47Q5SQN1 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SNAP47Q5SQN1 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SNAP47Q5SQN1 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.57■□□□□ 0.88
SNAP47Q5SQN1 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
SNAP47Q5SQN1 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
SNAP47Q5SQN1 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SNAP47Q5SQN1 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SNAP47Q5SQN1 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SNAP47Q5SQN1 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SNAP47Q5SQN1 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SNAP47Q5SQN1 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.56■□□□□ 0.88
SNAP47Q5SQN1 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SNAP47Q5SQN1 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms