Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC23.5■■□□□ 1.35
COL1A2P08123 LTK-203ENST00000453182 2412 ntTSL 2 BASIC23.5■■□□□ 1.35
COL1A2P08123 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
COL1A2P08123 DENND3-207ENST00000518347 850 ntTSL 2 BASIC23.5■■□□□ 1.35
COL1A2P08123 AL121832.2-201ENST00000610979 668 ntBASIC23.5■■□□□ 1.35
COL1A2P08123 AC080038.3-201ENST00000623346 1952 ntBASIC23.5■■□□□ 1.35
COL1A2P08123 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC23.49■■□□□ 1.35
COL1A2P08123 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
COL1A2P08123 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC23.49■■□□□ 1.35
COL1A2P08123 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
COL1A2P08123 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
COL1A2P08123 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
COL1A2P08123 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC23.49■■□□□ 1.35
COL1A2P08123 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
COL1A2P08123 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
COL1A2P08123 WT1-AS_3.1-201ENST00000613262 234 ntBASIC23.49■■□□□ 1.35
COL1A2P08123 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC23.48■■□□□ 1.35
COL1A2P08123 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
COL1A2P08123 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
COL1A2P08123 AC003102.1-202ENST00000563394 1796 ntBASIC23.48■■□□□ 1.35
COL1A2P08123 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC23.48■■□□□ 1.35
COL1A2P08123 TERF1P5-201ENST00000477545 1207 ntBASIC23.48■■□□□ 1.35
COL1A2P08123 AC007322.4-201ENST00000509611 723 ntBASIC23.48■■□□□ 1.35
COL1A2P08123 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC23.48■■□□□ 1.35
COL1A2P08123 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
COL1A2P08123 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
COL1A2P08123 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
COL1A2P08123 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC23.47■■□□□ 1.35
COL1A2P08123 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
COL1A2P08123 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
COL1A2P08123 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC23.47■■□□□ 1.35
COL1A2P08123 KRT16P2-201ENST00000414673 1423 ntBASIC23.47■■□□□ 1.35
COL1A2P08123 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
COL1A2P08123 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
COL1A2P08123 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC23.47■■□□□ 1.35
COL1A2P08123 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC23.47■■□□□ 1.35
COL1A2P08123 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
COL1A2P08123 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC23.47■■□□□ 1.35
COL1A2P08123 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
COL1A2P08123 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC23.46■■□□□ 1.35
COL1A2P08123 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
COL1A2P08123 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
COL1A2P08123 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
COL1A2P08123 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
COL1A2P08123 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC23.46■■□□□ 1.35
COL1A2P08123 APTR-203ENST00000430801 583 ntTSL 5 BASIC23.46■■□□□ 1.35
COL1A2P08123 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC23.46■■□□□ 1.35
COL1A2P08123 OAS3-207ENST00000551007 998 ntTSL 2 BASIC23.46■■□□□ 1.35
COL1A2P08123 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
COL1A2P08123 CASK-201ENST00000378154 2494 ntTSL 5 BASIC23.46■■□□□ 1.35
COL1A2P08123 RARG-204ENST00000543726 1779 ntTSL 2 BASIC23.46■■□□□ 1.35
COL1A2P08123 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
COL1A2P08123 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
COL1A2P08123 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC23.46■■□□□ 1.35
COL1A2P08123 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
COL1A2P08123 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
COL1A2P08123 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
COL1A2P08123 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
COL1A2P08123 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC23.45■■□□□ 1.34
COL1A2P08123 METTL15-202ENST00000403099 795 ntTSL 5 BASIC23.45■■□□□ 1.34
COL1A2P08123 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC23.45■■□□□ 1.34
COL1A2P08123 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
COL1A2P08123 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC23.45■■□□□ 1.34
COL1A2P08123 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC23.45■■□□□ 1.34
COL1A2P08123 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
COL1A2P08123 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC23.45■■□□□ 1.34
COL1A2P08123 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
COL1A2P08123 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
COL1A2P08123 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
COL1A2P08123 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
COL1A2P08123 AC083906.2-201ENST00000511578 360 ntBASIC23.44■■□□□ 1.34
COL1A2P08123 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC23.44■■□□□ 1.34
COL1A2P08123 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC23.44■■□□□ 1.34
COL1A2P08123 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
COL1A2P08123 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
COL1A2P08123 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC23.44■■□□□ 1.34
COL1A2P08123 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
COL1A2P08123 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
COL1A2P08123 ME2-208ENST00000638937 2471 ntTSL 5 BASIC23.44■■□□□ 1.34
COL1A2P08123 AL355802.2-201ENST00000402069 882 ntBASIC23.43■■□□□ 1.34
COL1A2P08123 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC23.43■■□□□ 1.34
COL1A2P08123 GUSBP6-202ENST00000438529 1198 ntBASIC23.43■■□□□ 1.34
COL1A2P08123 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
COL1A2P08123 AC133552.2-202ENST00000575694 574 ntBASIC23.43■■□□□ 1.34
COL1A2P08123 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
COL1A2P08123 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
COL1A2P08123 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
COL1A2P08123 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
COL1A2P08123 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC23.43■■□□□ 1.34
COL1A2P08123 TSPY6P-201ENST00000448518 926 ntBASIC23.42■■□□□ 1.34
COL1A2P08123 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC23.42■■□□□ 1.34
COL1A2P08123 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
COL1A2P08123 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
COL1A2P08123 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
COL1A2P08123 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
COL1A2P08123 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC23.42■■□□□ 1.34
COL1A2P08123 C9orf163-202ENST00000624034 2573 ntBASIC23.42■■□□□ 1.34
COL1A2P08123 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
COL1A2P08123 BMP1-204ENST00000397814 836 ntTSL 4 BASIC23.41■■□□□ 1.34
COL1A2P08123 AC142086.2-201ENST00000569753 217 ntBASIC23.41■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms