Protein–RNA interactions for Protein: Q6NVV3

NIPAL1, Magnesium transporter NIPA3, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL1Q6NVV3 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.49■□□□□ 0.87
NIPAL1Q6NVV3 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
NIPAL1Q6NVV3 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NIPAL1Q6NVV3 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
NIPAL1Q6NVV3 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.48■□□□□ 0.87
NIPAL1Q6NVV3 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NIPAL1Q6NVV3 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NIPAL1Q6NVV3 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
NIPAL1Q6NVV3 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NIPAL1Q6NVV3 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.48■□□□□ 0.87
NIPAL1Q6NVV3 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NIPAL1Q6NVV3 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.48■□□□□ 0.87
NIPAL1Q6NVV3 BX005040.4-201ENST00000637145 1518 ntBASIC20.48■□□□□ 0.87
NIPAL1Q6NVV3 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.48■□□□□ 0.87
NIPAL1Q6NVV3 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NIPAL1Q6NVV3 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NIPAL1Q6NVV3 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NIPAL1Q6NVV3 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.47■□□□□ 0.87
NIPAL1Q6NVV3 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
NIPAL1Q6NVV3 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.47■□□□□ 0.87
NIPAL1Q6NVV3 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.47■□□□□ 0.87
NIPAL1Q6NVV3 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NIPAL1Q6NVV3 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
NIPAL1Q6NVV3 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NIPAL1Q6NVV3 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
NIPAL1Q6NVV3 AC009237.3-201ENST00000393279 1427 ntBASIC20.47■□□□□ 0.87
NIPAL1Q6NVV3 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NIPAL1Q6NVV3 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.47■□□□□ 0.87
NIPAL1Q6NVV3 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
NIPAL1Q6NVV3 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NIPAL1Q6NVV3 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NIPAL1Q6NVV3 AC123595.1-201ENST00000440769 1046 ntBASIC20.47■□□□□ 0.87
NIPAL1Q6NVV3 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NIPAL1Q6NVV3 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.47■□□□□ 0.87
NIPAL1Q6NVV3 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.47■□□□□ 0.87
NIPAL1Q6NVV3 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.47■□□□□ 0.87
NIPAL1Q6NVV3 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.47■□□□□ 0.87
NIPAL1Q6NVV3 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
NIPAL1Q6NVV3 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NIPAL1Q6NVV3 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NIPAL1Q6NVV3 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
NIPAL1Q6NVV3 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.46■□□□□ 0.87
NIPAL1Q6NVV3 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NIPAL1Q6NVV3 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NIPAL1Q6NVV3 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NIPAL1Q6NVV3 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.46■□□□□ 0.87
NIPAL1Q6NVV3 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.46■□□□□ 0.87
NIPAL1Q6NVV3 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.46■□□□□ 0.87
NIPAL1Q6NVV3 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NIPAL1Q6NVV3 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
NIPAL1Q6NVV3 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NIPAL1Q6NVV3 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NIPAL1Q6NVV3 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NIPAL1Q6NVV3 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NIPAL1Q6NVV3 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
NIPAL1Q6NVV3 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
NIPAL1Q6NVV3 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NIPAL1Q6NVV3 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NIPAL1Q6NVV3 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NIPAL1Q6NVV3 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
NIPAL1Q6NVV3 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NIPAL1Q6NVV3 AC139530.1-201ENST00000575312 1977 ntBASIC20.45■□□□□ 0.86
NIPAL1Q6NVV3 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NIPAL1Q6NVV3 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.45■□□□□ 0.86
NIPAL1Q6NVV3 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NIPAL1Q6NVV3 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NIPAL1Q6NVV3 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.45■□□□□ 0.86
NIPAL1Q6NVV3 YBX1P1-201ENST00000445822 960 ntBASIC20.45■□□□□ 0.86
NIPAL1Q6NVV3 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
NIPAL1Q6NVV3 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.45■□□□□ 0.86
NIPAL1Q6NVV3 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
NIPAL1Q6NVV3 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.45■□□□□ 0.86
NIPAL1Q6NVV3 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NIPAL1Q6NVV3 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
NIPAL1Q6NVV3 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NIPAL1Q6NVV3 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.44■□□□□ 0.86
NIPAL1Q6NVV3 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
NIPAL1Q6NVV3 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.44■□□□□ 0.86
NIPAL1Q6NVV3 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NIPAL1Q6NVV3 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
NIPAL1Q6NVV3 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NIPAL1Q6NVV3 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NIPAL1Q6NVV3 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NIPAL1Q6NVV3 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
NIPAL1Q6NVV3 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NIPAL1Q6NVV3 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.44■□□□□ 0.86
NIPAL1Q6NVV3 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.44■□□□□ 0.86
NIPAL1Q6NVV3 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.44■□□□□ 0.86
NIPAL1Q6NVV3 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.44■□□□□ 0.86
NIPAL1Q6NVV3 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NIPAL1Q6NVV3 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NIPAL1Q6NVV3 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
NIPAL1Q6NVV3 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NIPAL1Q6NVV3 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NIPAL1Q6NVV3 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
NIPAL1Q6NVV3 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NIPAL1Q6NVV3 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NIPAL1Q6NVV3 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NIPAL1Q6NVV3 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
NIPAL1Q6NVV3 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms