Protein–RNA interactions for Protein: Q2M2E3

ODF4, Outer dense fiber protein 4, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF4Q2M2E3 AL031602.1-201ENST00000633169 911 ntBASIC18.82■□□□□ 0.6
ODF4Q2M2E3 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
ODF4Q2M2E3 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
ODF4Q2M2E3 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.82■□□□□ 0.6
ODF4Q2M2E3 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ODF4Q2M2E3 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ODF4Q2M2E3 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.82■□□□□ 0.6
ODF4Q2M2E3 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ODF4Q2M2E3 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ODF4Q2M2E3 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ODF4Q2M2E3 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ODF4Q2M2E3 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ODF4Q2M2E3 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
ODF4Q2M2E3 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.81■□□□□ 0.6
ODF4Q2M2E3 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ODF4Q2M2E3 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ODF4Q2M2E3 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
ODF4Q2M2E3 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC18.81■□□□□ 0.6
ODF4Q2M2E3 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC18.81■□□□□ 0.6
ODF4Q2M2E3 AL356740.2-201ENST00000601559 647 ntBASIC18.81■□□□□ 0.6
ODF4Q2M2E3 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ODF4Q2M2E3 OR7E47P-201ENST00000546390 1422 ntBASIC18.81■□□□□ 0.6
ODF4Q2M2E3 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
ODF4Q2M2E3 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ODF4Q2M2E3 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.81■□□□□ 0.6
ODF4Q2M2E3 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
ODF4Q2M2E3 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.81■□□□□ 0.6
ODF4Q2M2E3 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ODF4Q2M2E3 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ODF4Q2M2E3 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
ODF4Q2M2E3 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ODF4Q2M2E3 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
ODF4Q2M2E3 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC18.8■□□□□ 0.6
ODF4Q2M2E3 GRAMD4P7-201ENST00000578182 1232 ntBASIC18.8■□□□□ 0.6
ODF4Q2M2E3 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC18.8■□□□□ 0.6
ODF4Q2M2E3 AL035685.1-201ENST00000636663 812 ntBASIC18.8■□□□□ 0.6
ODF4Q2M2E3 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
ODF4Q2M2E3 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ODF4Q2M2E3 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ODF4Q2M2E3 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
ODF4Q2M2E3 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.8■□□□□ 0.6
ODF4Q2M2E3 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
ODF4Q2M2E3 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.8■□□□□ 0.6
ODF4Q2M2E3 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.8■□□□□ 0.6
ODF4Q2M2E3 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ODF4Q2M2E3 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ODF4Q2M2E3 FEM1AP4-201ENST00000443167 1987 ntBASIC18.79■□□□□ 0.6
ODF4Q2M2E3 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.79■□□□□ 0.6
ODF4Q2M2E3 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ODF4Q2M2E3 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ODF4Q2M2E3 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ODF4Q2M2E3 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC18.79■□□□□ 0.6
ODF4Q2M2E3 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.79■□□□□ 0.6
ODF4Q2M2E3 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ODF4Q2M2E3 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ODF4Q2M2E3 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ODF4Q2M2E3 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ODF4Q2M2E3 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.79■□□□□ 0.6
ODF4Q2M2E3 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ODF4Q2M2E3 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.79■□□□□ 0.6
ODF4Q2M2E3 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
ODF4Q2M2E3 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ODF4Q2M2E3 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.78■□□□□ 0.6
ODF4Q2M2E3 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
ODF4Q2M2E3 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ODF4Q2M2E3 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
ODF4Q2M2E3 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC18.78■□□□□ 0.6
ODF4Q2M2E3 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
ODF4Q2M2E3 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
ODF4Q2M2E3 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
ODF4Q2M2E3 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.78■□□□□ 0.6
ODF4Q2M2E3 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
ODF4Q2M2E3 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
ODF4Q2M2E3 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
ODF4Q2M2E3 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ODF4Q2M2E3 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.77■□□□□ 0.6
ODF4Q2M2E3 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.77■□□□□ 0.6
ODF4Q2M2E3 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ODF4Q2M2E3 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ODF4Q2M2E3 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
ODF4Q2M2E3 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ODF4Q2M2E3 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
ODF4Q2M2E3 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
ODF4Q2M2E3 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ODF4Q2M2E3 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ODF4Q2M2E3 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.77■□□□□ 0.6
ODF4Q2M2E3 MIR3181-201ENST00000578512 73 ntBASIC18.77■□□□□ 0.6
ODF4Q2M2E3 RASSF1-AS1-201ENST00000629828 790 ntBASIC18.77■□□□□ 0.6
ODF4Q2M2E3 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ODF4Q2M2E3 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.77■□□□□ 0.6
ODF4Q2M2E3 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.77■□□□□ 0.6
ODF4Q2M2E3 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ODF4Q2M2E3 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
ODF4Q2M2E3 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
ODF4Q2M2E3 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ODF4Q2M2E3 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.76■□□□□ 0.59
ODF4Q2M2E3 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
ODF4Q2M2E3 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
ODF4Q2M2E3 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ODF4Q2M2E3 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms