Protein–RNA interactions for Protein: Q9HCP0

CSNK1G1, Casein kinase I isoform gamma-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G1Q9HCP0 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC22.52■■□□□ 1.2
CSNK1G1Q9HCP0 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CSNK1G1Q9HCP0 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC22.51■■□□□ 1.19
CSNK1G1Q9HCP0 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CSNK1G1Q9HCP0 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CSNK1G1Q9HCP0 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CSNK1G1Q9HCP0 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC22.51■■□□□ 1.19
CSNK1G1Q9HCP0 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CSNK1G1Q9HCP0 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC22.51■■□□□ 1.19
CSNK1G1Q9HCP0 GXYLT1P2-201ENST00000433312 1230 ntBASIC22.51■■□□□ 1.19
CSNK1G1Q9HCP0 TESC-206ENST00000541210 936 ntTSL 3 BASIC22.51■■□□□ 1.19
CSNK1G1Q9HCP0 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CSNK1G1Q9HCP0 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC22.51■■□□□ 1.19
CSNK1G1Q9HCP0 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC22.5■■□□□ 1.19
CSNK1G1Q9HCP0 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CSNK1G1Q9HCP0 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CSNK1G1Q9HCP0 ME3-201ENST00000323418 1068 ntTSL 5 BASIC22.5■■□□□ 1.19
CSNK1G1Q9HCP0 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CSNK1G1Q9HCP0 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC22.5■■□□□ 1.19
CSNK1G1Q9HCP0 KRT19P1-201ENST00000405746 1186 ntBASIC22.5■■□□□ 1.19
CSNK1G1Q9HCP0 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC22.5■■□□□ 1.19
CSNK1G1Q9HCP0 ECEL1P1-201ENST00000373592 1742 ntBASIC22.5■■□□□ 1.19
CSNK1G1Q9HCP0 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CSNK1G1Q9HCP0 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC22.5■■□□□ 1.19
CSNK1G1Q9HCP0 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CSNK1G1Q9HCP0 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC22.49■■□□□ 1.19
CSNK1G1Q9HCP0 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
CSNK1G1Q9HCP0 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CSNK1G1Q9HCP0 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CSNK1G1Q9HCP0 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC22.49■■□□□ 1.19
CSNK1G1Q9HCP0 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC22.49■■□□□ 1.19
CSNK1G1Q9HCP0 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC22.49■■□□□ 1.19
CSNK1G1Q9HCP0 AC092437.1-201ENST00000624794 1048 ntBASIC22.49■■□□□ 1.19
CSNK1G1Q9HCP0 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
CSNK1G1Q9HCP0 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC22.49■■□□□ 1.19
CSNK1G1Q9HCP0 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CSNK1G1Q9HCP0 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CSNK1G1Q9HCP0 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC22.49■■□□□ 1.19
CSNK1G1Q9HCP0 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CSNK1G1Q9HCP0 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CSNK1G1Q9HCP0 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC22.48■■□□□ 1.19
CSNK1G1Q9HCP0 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CSNK1G1Q9HCP0 EEF1DP3-203ENST00000566025 782 ntBASIC22.48■■□□□ 1.19
CSNK1G1Q9HCP0 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC22.48■■□□□ 1.19
CSNK1G1Q9HCP0 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC22.48■■□□□ 1.19
CSNK1G1Q9HCP0 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CSNK1G1Q9HCP0 AC104187.1-201ENST00000607510 612 ntBASIC22.48■■□□□ 1.19
CSNK1G1Q9HCP0 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CSNK1G1Q9HCP0 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CSNK1G1Q9HCP0 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CSNK1G1Q9HCP0 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
CSNK1G1Q9HCP0 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
CSNK1G1Q9HCP0 AC133561.1-201ENST00000568600 2415 ntBASIC22.48■■□□□ 1.19
CSNK1G1Q9HCP0 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CSNK1G1Q9HCP0 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC22.47■■□□□ 1.19
CSNK1G1Q9HCP0 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CSNK1G1Q9HCP0 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CSNK1G1Q9HCP0 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CSNK1G1Q9HCP0 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
CSNK1G1Q9HCP0 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
CSNK1G1Q9HCP0 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CSNK1G1Q9HCP0 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CSNK1G1Q9HCP0 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC22.47■■□□□ 1.19
CSNK1G1Q9HCP0 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC22.47■■□□□ 1.19
CSNK1G1Q9HCP0 IKBKGP1-201ENST00000612193 1073 ntBASIC22.47■■□□□ 1.19
CSNK1G1Q9HCP0 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CSNK1G1Q9HCP0 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CSNK1G1Q9HCP0 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CSNK1G1Q9HCP0 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CSNK1G1Q9HCP0 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CSNK1G1Q9HCP0 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC22.46■■□□□ 1.19
CSNK1G1Q9HCP0 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CSNK1G1Q9HCP0 AC003102.1-202ENST00000563394 1796 ntBASIC22.46■■□□□ 1.19
CSNK1G1Q9HCP0 AC053503.5-201ENST00000601508 636 ntBASIC22.46■■□□□ 1.19
CSNK1G1Q9HCP0 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CSNK1G1Q9HCP0 FAM99A-202ENST00000538190 1989 ntBASIC22.46■■□□□ 1.19
CSNK1G1Q9HCP0 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CSNK1G1Q9HCP0 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC22.46■■□□□ 1.19
CSNK1G1Q9HCP0 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
CSNK1G1Q9HCP0 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
CSNK1G1Q9HCP0 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
CSNK1G1Q9HCP0 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.19
CSNK1G1Q9HCP0 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
CSNK1G1Q9HCP0 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
CSNK1G1Q9HCP0 AC026471.6-201ENST00000622954 1905 ntBASIC22.45■■□□□ 1.18
CSNK1G1Q9HCP0 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CSNK1G1Q9HCP0 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CSNK1G1Q9HCP0 STX7-201ENST00000367937 1090 ntTSL 5 BASIC22.45■■□□□ 1.18
CSNK1G1Q9HCP0 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC22.45■■□□□ 1.18
CSNK1G1Q9HCP0 AC006015.1-201ENST00000429970 570 ntBASIC22.45■■□□□ 1.18
CSNK1G1Q9HCP0 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
CSNK1G1Q9HCP0 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CSNK1G1Q9HCP0 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC22.45■■□□□ 1.18
CSNK1G1Q9HCP0 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC22.45■■□□□ 1.18
CSNK1G1Q9HCP0 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
CSNK1G1Q9HCP0 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CSNK1G1Q9HCP0 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CSNK1G1Q9HCP0 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CSNK1G1Q9HCP0 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CSNK1G1Q9HCP0 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms