Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.14■□□□□ 0.81
SIMC1Q8NDZ2 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.14■□□□□ 0.81
SIMC1Q8NDZ2 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.14■□□□□ 0.81
SIMC1Q8NDZ2 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SIMC1Q8NDZ2 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.81
SIMC1Q8NDZ2 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.14■□□□□ 0.81
SIMC1Q8NDZ2 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.14■□□□□ 0.81
SIMC1Q8NDZ2 SMUG1P1-201ENST00000590640 811 ntBASIC20.14■□□□□ 0.81
SIMC1Q8NDZ2 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SIMC1Q8NDZ2 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.14■□□□□ 0.81
SIMC1Q8NDZ2 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SIMC1Q8NDZ2 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.13■□□□□ 0.81
SIMC1Q8NDZ2 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SIMC1Q8NDZ2 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.13■□□□□ 0.81
SIMC1Q8NDZ2 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SIMC1Q8NDZ2 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SIMC1Q8NDZ2 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SIMC1Q8NDZ2 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.13■□□□□ 0.81
SIMC1Q8NDZ2 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.13■□□□□ 0.81
SIMC1Q8NDZ2 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.13■□□□□ 0.81
SIMC1Q8NDZ2 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
SIMC1Q8NDZ2 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
SIMC1Q8NDZ2 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SIMC1Q8NDZ2 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
SIMC1Q8NDZ2 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
SIMC1Q8NDZ2 FAM99A-202ENST00000538190 1989 ntBASIC20.12■□□□□ 0.81
SIMC1Q8NDZ2 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SIMC1Q8NDZ2 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.12■□□□□ 0.81
SIMC1Q8NDZ2 AC105265.2-201ENST00000467189 838 ntBASIC20.12■□□□□ 0.81
SIMC1Q8NDZ2 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.12■□□□□ 0.81
SIMC1Q8NDZ2 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.12■□□□□ 0.81
SIMC1Q8NDZ2 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.12■□□□□ 0.81
SIMC1Q8NDZ2 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.12■□□□□ 0.81
SIMC1Q8NDZ2 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SIMC1Q8NDZ2 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.12■□□□□ 0.81
SIMC1Q8NDZ2 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SIMC1Q8NDZ2 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SIMC1Q8NDZ2 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.11■□□□□ 0.81
SIMC1Q8NDZ2 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SIMC1Q8NDZ2 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.11■□□□□ 0.81
SIMC1Q8NDZ2 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.11■□□□□ 0.81
SIMC1Q8NDZ2 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SIMC1Q8NDZ2 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SIMC1Q8NDZ2 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SIMC1Q8NDZ2 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.11■□□□□ 0.81
SIMC1Q8NDZ2 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.11■□□□□ 0.81
SIMC1Q8NDZ2 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.11■□□□□ 0.81
SIMC1Q8NDZ2 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SIMC1Q8NDZ2 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SIMC1Q8NDZ2 AC007375.3-201ENST00000600936 2314 ntBASIC20.11■□□□□ 0.81
SIMC1Q8NDZ2 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SIMC1Q8NDZ2 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.11■□□□□ 0.81
SIMC1Q8NDZ2 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SIMC1Q8NDZ2 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SIMC1Q8NDZ2 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SIMC1Q8NDZ2 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
SIMC1Q8NDZ2 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SIMC1Q8NDZ2 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SIMC1Q8NDZ2 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SIMC1Q8NDZ2 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SIMC1Q8NDZ2 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
SIMC1Q8NDZ2 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SIMC1Q8NDZ2 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SIMC1Q8NDZ2 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SIMC1Q8NDZ2 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
SIMC1Q8NDZ2 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SIMC1Q8NDZ2 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.1■□□□□ 0.81
SIMC1Q8NDZ2 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.1■□□□□ 0.81
SIMC1Q8NDZ2 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SIMC1Q8NDZ2 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.1■□□□□ 0.81
SIMC1Q8NDZ2 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SIMC1Q8NDZ2 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
SIMC1Q8NDZ2 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SIMC1Q8NDZ2 FBXW4P1-201ENST00000426721 2239 ntBASIC20.1■□□□□ 0.81
SIMC1Q8NDZ2 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SIMC1Q8NDZ2 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SIMC1Q8NDZ2 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.09■□□□□ 0.81
SIMC1Q8NDZ2 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.09■□□□□ 0.81
SIMC1Q8NDZ2 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.09■□□□□ 0.81
SIMC1Q8NDZ2 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SIMC1Q8NDZ2 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SIMC1Q8NDZ2 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.09■□□□□ 0.81
SIMC1Q8NDZ2 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SIMC1Q8NDZ2 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
SIMC1Q8NDZ2 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SIMC1Q8NDZ2 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SIMC1Q8NDZ2 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SIMC1Q8NDZ2 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SIMC1Q8NDZ2 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.09■□□□□ 0.81
SIMC1Q8NDZ2 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.09■□□□□ 0.81
SIMC1Q8NDZ2 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.08■□□□□ 0.81
SIMC1Q8NDZ2 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.08■□□□□ 0.81
SIMC1Q8NDZ2 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
SIMC1Q8NDZ2 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
SIMC1Q8NDZ2 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SIMC1Q8NDZ2 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SIMC1Q8NDZ2 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SIMC1Q8NDZ2 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.81
SIMC1Q8NDZ2 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SIMC1Q8NDZ2 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 241.5 ms