Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
LINC01555Q8NAE3 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LINC01555Q8NAE3 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.68■□□□□ 0.9
LINC01555Q8NAE3 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LINC01555Q8NAE3 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LINC01555Q8NAE3 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.68■□□□□ 0.9
LINC01555Q8NAE3 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.68■□□□□ 0.9
LINC01555Q8NAE3 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.68■□□□□ 0.9
LINC01555Q8NAE3 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LINC01555Q8NAE3 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LINC01555Q8NAE3 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
LINC01555Q8NAE3 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LINC01555Q8NAE3 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
LINC01555Q8NAE3 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
LINC01555Q8NAE3 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LINC01555Q8NAE3 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LINC01555Q8NAE3 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.67■□□□□ 0.9
LINC01555Q8NAE3 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
LINC01555Q8NAE3 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LINC01555Q8NAE3 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LINC01555Q8NAE3 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.67■□□□□ 0.9
LINC01555Q8NAE3 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.67■□□□□ 0.9
LINC01555Q8NAE3 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
LINC01555Q8NAE3 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LINC01555Q8NAE3 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
LINC01555Q8NAE3 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LINC01555Q8NAE3 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.67■□□□□ 0.9
LINC01555Q8NAE3 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LINC01555Q8NAE3 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LINC01555Q8NAE3 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
LINC01555Q8NAE3 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.67■□□□□ 0.9
LINC01555Q8NAE3 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LINC01555Q8NAE3 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
LINC01555Q8NAE3 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LINC01555Q8NAE3 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.66■□□□□ 0.9
LINC01555Q8NAE3 AL162430.1-201ENST00000480705 870 ntBASIC20.66■□□□□ 0.9
LINC01555Q8NAE3 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
LINC01555Q8NAE3 KRT18P61-201ENST00000585825 1298 ntBASIC20.66■□□□□ 0.9
LINC01555Q8NAE3 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
LINC01555Q8NAE3 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LINC01555Q8NAE3 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LINC01555Q8NAE3 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
LINC01555Q8NAE3 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LINC01555Q8NAE3 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LINC01555Q8NAE3 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
LINC01555Q8NAE3 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
LINC01555Q8NAE3 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.65■□□□□ 0.9
LINC01555Q8NAE3 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.65■□□□□ 0.9
LINC01555Q8NAE3 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LINC01555Q8NAE3 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.65■□□□□ 0.9
LINC01555Q8NAE3 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.65■□□□□ 0.9
LINC01555Q8NAE3 AC079140.4-201ENST00000507448 529 ntBASIC20.65■□□□□ 0.9
LINC01555Q8NAE3 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.65■□□□□ 0.9
LINC01555Q8NAE3 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.65■□□□□ 0.9
LINC01555Q8NAE3 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LINC01555Q8NAE3 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LINC01555Q8NAE3 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LINC01555Q8NAE3 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LINC01555Q8NAE3 C11orf96-202ENST00000528572 1834 ntBASIC20.64■□□□□ 0.9
LINC01555Q8NAE3 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
LINC01555Q8NAE3 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.64■□□□□ 0.89
LINC01555Q8NAE3 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LINC01555Q8NAE3 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
LINC01555Q8NAE3 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.64■□□□□ 0.89
LINC01555Q8NAE3 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.64■□□□□ 0.89
LINC01555Q8NAE3 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.89
LINC01555Q8NAE3 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.64■□□□□ 0.89
LINC01555Q8NAE3 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LINC01555Q8NAE3 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.64■□□□□ 0.89
LINC01555Q8NAE3 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
LINC01555Q8NAE3 AC003102.1-202ENST00000563394 1796 ntBASIC20.64■□□□□ 0.89
LINC01555Q8NAE3 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.64■□□□□ 0.89
LINC01555Q8NAE3 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.64■□□□□ 0.89
LINC01555Q8NAE3 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LINC01555Q8NAE3 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
LINC01555Q8NAE3 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.63■□□□□ 0.89
LINC01555Q8NAE3 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LINC01555Q8NAE3 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.63■□□□□ 0.89
LINC01555Q8NAE3 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.63■□□□□ 0.89
LINC01555Q8NAE3 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LINC01555Q8NAE3 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LINC01555Q8NAE3 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
LINC01555Q8NAE3 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.63■□□□□ 0.89
LINC01555Q8NAE3 KRT18P5-201ENST00000436075 1291 ntBASIC20.63■□□□□ 0.89
LINC01555Q8NAE3 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.63■□□□□ 0.89
LINC01555Q8NAE3 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.63■□□□□ 0.89
LINC01555Q8NAE3 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.63■□□□□ 0.89
LINC01555Q8NAE3 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.63■□□□□ 0.89
LINC01555Q8NAE3 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
LINC01555Q8NAE3 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LINC01555Q8NAE3 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LINC01555Q8NAE3 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.63■□□□□ 0.89
LINC01555Q8NAE3 AC010542.4-201ENST00000563151 1910 ntBASIC20.63■□□□□ 0.89
LINC01555Q8NAE3 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LINC01555Q8NAE3 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
LINC01555Q8NAE3 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LINC01555Q8NAE3 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LINC01555Q8NAE3 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.62■□□□□ 0.89
LINC01555Q8NAE3 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
LINC01555Q8NAE3 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms