Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
CDH6P55285 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
CDH6P55285 GRAMD4P2-201ENST00000423297 1097 ntBASIC22.27■■□□□ 1.16
CDH6P55285 AL034346.1-201ENST00000568244 1277 ntBASIC22.27■■□□□ 1.16
CDH6P55285 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CDH6P55285 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CDH6P55285 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
CDH6P55285 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
CDH6P55285 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CDH6P55285 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
CDH6P55285 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC22.26■■□□□ 1.15
CDH6P55285 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CDH6P55285 AICDA-202ENST00000537228 667 ntTSL 5 BASIC22.26■■□□□ 1.15
CDH6P55285 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC22.26■■□□□ 1.15
CDH6P55285 AF213884.3-201ENST00000563833 479 ntBASIC22.26■■□□□ 1.15
CDH6P55285 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC22.26■■□□□ 1.15
CDH6P55285 SMUG1P1-201ENST00000590640 811 ntBASIC22.26■■□□□ 1.15
CDH6P55285 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CDH6P55285 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
CDH6P55285 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CDH6P55285 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CDH6P55285 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CDH6P55285 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC22.25■■□□□ 1.15
CDH6P55285 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC22.25■■□□□ 1.15
CDH6P55285 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDH6P55285 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CDH6P55285 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
CDH6P55285 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CDH6P55285 AL031432.3-201ENST00000607698 485 ntBASIC22.25■■□□□ 1.15
CDH6P55285 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
CDH6P55285 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC22.25■■□□□ 1.15
CDH6P55285 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDH6P55285 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC22.25■■□□□ 1.15
CDH6P55285 TSPY26P-201ENST00000476365 1326 ntBASIC22.25■■□□□ 1.15
CDH6P55285 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC22.25■■□□□ 1.15
CDH6P55285 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
CDH6P55285 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CDH6P55285 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDH6P55285 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDH6P55285 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
CDH6P55285 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
CDH6P55285 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
CDH6P55285 AC244015.2-201ENST00000616358 1861 ntBASIC22.24■■□□□ 1.15
CDH6P55285 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CDH6P55285 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CDH6P55285 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CDH6P55285 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CDH6P55285 MIR939-201ENST00000401314 82 ntBASIC22.24■■□□□ 1.15
CDH6P55285 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CDH6P55285 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
CDH6P55285 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC22.24■■□□□ 1.15
CDH6P55285 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CDH6P55285 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
CDH6P55285 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CDH6P55285 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
CDH6P55285 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
CDH6P55285 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CDH6P55285 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CDH6P55285 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
CDH6P55285 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
CDH6P55285 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC22.23■■□□□ 1.15
CDH6P55285 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
CDH6P55285 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC22.23■■□□□ 1.15
CDH6P55285 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC22.23■■□□□ 1.15
CDH6P55285 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC22.23■■□□□ 1.15
CDH6P55285 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CDH6P55285 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
CDH6P55285 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CDH6P55285 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CDH6P55285 RASA4CP-201ENST00000424092 1398 ntBASIC22.23■■□□□ 1.15
CDH6P55285 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CDH6P55285 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
CDH6P55285 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CDH6P55285 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CDH6P55285 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC22.22■■□□□ 1.15
CDH6P55285 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
CDH6P55285 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CDH6P55285 AC091305.1-201ENST00000479476 895 ntBASIC22.22■■□□□ 1.15
CDH6P55285 SUDS3P1-201ENST00000505831 966 ntBASIC22.22■■□□□ 1.15
CDH6P55285 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CDH6P55285 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC22.21■■□□□ 1.15
CDH6P55285 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
CDH6P55285 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC22.21■■□□□ 1.15
CDH6P55285 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CDH6P55285 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CDH6P55285 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CDH6P55285 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CDH6P55285 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC22.21■■□□□ 1.15
CDH6P55285 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CDH6P55285 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC22.21■■□□□ 1.15
CDH6P55285 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC22.21■■□□□ 1.15
CDH6P55285 AL136967.2-201ENST00000623968 743 ntBASIC22.21■■□□□ 1.15
CDH6P55285 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC22.21■■□□□ 1.15
CDH6P55285 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CDH6P55285 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC22.21■■□□□ 1.15
CDH6P55285 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
CDH6P55285 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
CDH6P55285 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CDH6P55285 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CDH6P55285 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC22.2■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms