Protein–RNA interactions for Protein: P38353

SSH1, Sec sixty-one protein homolog, yeastyeast

Known RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSH1P38353 YPR1YDR368W 939 nt2.85□□□□□ -1.95
SSH1P38353 YAL069WYAL069W 315 nt2.85□□□□□ -1.95
SSH1P38353 YLR230WYLR230W 306 nt2.85□□□□□ -1.95
SSH1P38353 YAR075WYAR075W 474 nt2.85□□□□□ -1.95
SSH1P38353 ARO1YDR127W 4767 nt2.85□□□□□ -1.95
SSH1P38353 OAF3YKR064W 2592 nt2.85□□□□□ -1.95
SSH1P38353 HAP4YKL109W 1665 nt2.85□□□□□ -1.95
SSH1P38353 SHQ1YIL104C 1524 nt2.84□□□□□ -1.95
SSH1P38353 RAX2YLR084C 3663 nt2.84□□□□□ -1.95
SSH1P38353 TLG1YDR468C 675 nt2.84□□□□□ -1.95
SSH1P38353 RPL30YGL030W 318 nt2.84□□□□□ -1.95
SSH1P38353 MRPS35YGR165W 1038 nt2.84□□□□□ -1.95
SSH1P38353 SDP1YIL113W 630 nt2.84□□□□□ -1.95
SSH1P38353 RPL17AYKL180W 555 nt2.84□□□□□ -1.95
SSH1P38353 REX3YLR107W 1215 nt2.84□□□□□ -1.95
SSH1P38353 PFK27YOL136C 1194 nt2.84□□□□□ -1.95
SSH1P38353 BUD21YOR078W 645 nt2.84□□□□□ -1.95
SSH1P38353 HPA2YPR193C 471 nt2.84□□□□□ -1.95
SSH1P38353 SUP45YBR143C 1314 nt2.84□□□□□ -1.96
SSH1P38353 ARG2YJL071W 1725 nt2.84□□□□□ -1.96
SSH1P38353 SIZ1YDR409W 2715 nt2.83□□□□□ -1.96
SSH1P38353 BSC1YDL037C 987 nt2.83□□□□□ -1.96
SSH1P38353 DET1YDR051C 1005 nt2.83□□□□□ -1.96
SSH1P38353 BMH2YDR099W 822 nt2.83□□□□□ -1.96
SSH1P38353 PDS1YDR113C 1122 nt2.83□□□□□ -1.96
SSH1P38353 IRC18YJL037W 675 nt2.83□□□□□ -1.96
SSH1P38353 PHD1YKL043W 1101 nt2.83□□□□□ -1.96
SSH1P38353 MED11YMR112C 396 nt2.83□□□□□ -1.96
SSH1P38353 PNT1YOR266W 1272 nt2.83□□□□□ -1.96
SSH1P38353 ATP25YMR098C 1839 nt2.83□□□□□ -1.96
SSH1P38353 KIN3YAR018C 1308 nt2.83□□□□□ -1.96
SSH1P38353 DNM1YLL001W 2274 nt2.82□□□□□ -1.96
SSH1P38353 SPO14YKR031C 5052 nt2.82□□□□□ -1.96
SSH1P38353 CUE3YGL110C 1875 nt2.82□□□□□ -1.96
SSH1P38353 CTH1YDR151C 978 nt2.82□□□□□ -1.96
SSH1P38353 YGL152CYGL152C 678 nt2.82□□□□□ -1.96
SSH1P38353 CAB2YIL083C 1098 nt2.82□□□□□ -1.96
SSH1P38353 MDV1YJL112W 2145 nt2.82□□□□□ -1.96
SSH1P38353 MBR1YKL093W 1020 nt2.82□□□□□ -1.96
SSH1P38353 SEC65YML105C 822 nt2.82□□□□□ -1.96
SSH1P38353 OCA2YNL056W 594 nt2.82□□□□□ -1.96
SSH1P38353 IAH1YOR126C 717 nt2.82□□□□□ -1.96
SSH1P38353 YOR263CYOR263C 408 nt2.82□□□□□ -1.96
SSH1P38353 CMK1YFR014C 1341 nt2.82□□□□□ -1.96
SSH1P38353 PUF6YDR496C 1971 nt2.81□□□□□ -1.96
SSH1P38353 DSL1YNL258C 2265 nt2.81□□□□□ -1.96
SSH1P38353 PMS1YNL082W 2622 nt2.81□□□□□ -1.96
SSH1P38353 SEC15YGL233W 2733 nt2.81□□□□□ -1.96
SSH1P38353 YDL241WYDL241W 372 nt2.81□□□□□ -1.96
SSH1P38353 RRP8YDR083W 1179 nt2.81□□□□□ -1.96
SSH1P38353 YGL118CYGL118C 438 nt2.81□□□□□ -1.96
SSH1P38353 SWD2YKL018W 990 nt2.81□□□□□ -1.96
SSH1P38353 YMR122W-AYMR122W-A 255 nt2.81□□□□□ -1.96
SSH1P38353 IMP4YNL075W 873 nt2.81□□□□□ -1.96
SSH1P38353 YSA1YBR111C 696 nt2.81□□□□□ -1.96
SSH1P38353 KRE2YDR483W 1329 nt2.81□□□□□ -1.96
SSH1P38353 UBP8YMR223W 1416 nt2.81□□□□□ -1.96
SSH1P38353 AKR1YDR264C 2295 nt2.81□□□□□ -1.96
SSH1P38353 FUN30YAL019W 3396 nt2.81□□□□□ -1.96
SSH1P38353 VAS1YGR094W 3315 nt2.8□□□□□ -1.96
SSH1P38353 SRC1YML034W 2505 nt2.8□□□□□ -1.96
SSH1P38353 TGL3YMR313C 1929 nt2.8□□□□□ -1.96
SSH1P38353 SDS23YGL056C 1584 nt2.8□□□□□ -1.96
SSH1P38353 SEC59YMR013C 1560 nt2.8□□□□□ -1.96
SSH1P38353 RRP17YDR412W 708 nt2.8□□□□□ -1.96
SSH1P38353 PET54YGR222W 882 nt2.8□□□□□ -1.96
SSH1P38353 DOG2YHR043C 741 nt2.8□□□□□ -1.96
SSH1P38353 OXR1YPL196W 822 nt2.8□□□□□ -1.96
SSH1P38353 MRPL51YPR100W 423 nt2.8□□□□□ -1.96
SSH1P38353 YPR136CYPR136C 513 nt2.8□□□□□ -1.96
SSH1P38353 DUF1YOL087C 3351 nt2.8□□□□□ -1.96
SSH1P38353 JSN1YJR091C 3276 nt2.8□□□□□ -1.96
SSH1P38353 NFT1YKR103W 3657 nt2.8□□□□□ -1.96
SSH1P38353 NDC80YIL144W 2076 nt2.8□□□□□ -1.96
SSH1P38353 MSM1YGR171C 1728 nt2.79□□□□□ -1.96
SSH1P38353 HFD1YMR110C 1599 nt2.79□□□□□ -1.96
SSH1P38353 TFB2YPL122C 1542 nt2.79□□□□□ -1.96
SSH1P38353 PHO81YGR233C 3537 nt2.79□□□□□ -1.96
SSH1P38353 YIG1YPL201C 1386 nt2.79□□□□□ -1.96
SSH1P38353 PCI8YIL071C 1335 nt2.79□□□□□ -1.96
SSH1P38353 RMD5YDR255C 1266 nt2.79□□□□□ -1.96
SSH1P38353 tK(UUU)DtK(UUU)D 73 nt2.79□□□□□ -1.96
SSH1P38353 tK(UUU)G1tK(UUU)G1 73 nt2.79□□□□□ -1.96
SSH1P38353 tK(UUU)G2tK(UUU)G2 73 nt2.79□□□□□ -1.96
SSH1P38353 tK(UUU)KtK(UUU)K 73 nt2.79□□□□□ -1.96
SSH1P38353 tK(UUU)LtK(UUU)L 73 nt2.79□□□□□ -1.96
SSH1P38353 tK(UUU)OtK(UUU)O 73 nt2.79□□□□□ -1.96
SSH1P38353 tK(UUU)PtK(UUU)P 73 nt2.79□□□□□ -1.96
SSH1P38353 KXD1YGL079W 657 nt2.79□□□□□ -1.96
SSH1P38353 RPC17YJL011C 486 nt2.79□□□□□ -1.96
SSH1P38353 GMH1YKR030W 822 nt2.79□□□□□ -1.96
SSH1P38353 HUB1YNR032C-A 222 nt2.79□□□□□ -1.96
SSH1P38353 SNT1YCR033W 3681 nt2.79□□□□□ -1.96
SSH1P38353 LRG1YDL240W 3054 nt2.79□□□□□ -1.96
SSH1P38353 YPL109CYPL109C 1974 nt2.78□□□□□ -1.96
SSH1P38353 RPS14AYCR031C 414 nt2.78□□□□□ -1.96
SSH1P38353 YDR355CYDR355C 303 nt2.78□□□□□ -1.96
SSH1P38353 TFA2YKR062W 987 nt2.78□□□□□ -1.96
SSH1P38353 HRT1YOL133W 366 nt2.78□□□□□ -1.96
SSH1P38353 GPI2YPL076W 843 nt2.78□□□□□ -1.96
Retrieved 100 of 7,029 protein–RNA pairs in 28.8 ms