RNA–Protein interactions for RNA: YDR083W

RRP8, Transcript of Nucleolar S-adenosylmethionine-dependent rRNA methyltransferase, yeastyeast

Gene RRP8, Length 1,179 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP8YDR083W FAP1P53971 965 aa13.47□□□□□ -0.25
RRP8YDR083W DRS1P32892 752 aaKnown RBP13.2□□□□□ -0.3
RRP8YDR083W MTC1P47018 478 aaKnown RBP13.07□□□□□ -0.32
RRP8YDR083W PRY3P47033 881 aa12.77□□□□□ -0.37
RRP8YDR083W YCK3P39962 524 aa11.95□□□□□ -0.5
RRP8YDR083W HAA1Q12753 694 aaKnown RBP11.74□□□□□ -0.53
RRP8YDR083W AAD16Q02895 342 aa11.5□□□□□ -0.57
RRP8YDR083W BFR2Q06631 534 aaKnown RBP11.5□□□□□ -0.57
RRP8YDR083W PRI1P10363 409 aa11.24□□□□□ -0.61
RRP8YDR083W DIP2Q12220 943 aaPredicted RBP11.16□□□□□ -0.62
RRP8YDR083W AVT3P36062 692 aa11.07□□□□□ -0.64
RRP8YDR083W ISW2Q08773 1120 aa10.95□□□□□ -0.66
RRP8YDR083W TFA1P36100 482 aa10.92□□□□□ -0.66
RRP8YDR083W RPG1P38249 964 aaKnown RBP10.74□□□□□ -0.69
RRP8YDR083W BUD31P25337 157 aaPredicted RBP10.68□□□□□ -0.7
RRP8YDR083W TSR3Q12094 313 aaKnown RBP10.54□□□□□ -0.72
RRP8YDR083W RSE1Q04693 1361 aaKnown RBP10.48□□□□□ -0.73
RRP8YDR083W YGL015CP33199 130 aa10.37□□□□□ -0.75
RRP8YDR083W MRPL32P25348 183 aa10.15□□□□□ -0.78
RRP8YDR083W RPL17AP05740 184 aaKnown RBP10.08□□□□□ -0.8
RRP8YDR083W RPL17BP46990 184 aaKnown RBP10.08□□□□□ -0.8
RRP8YDR083W REB1P21538 810 aa10□□□□□ -0.81
RRP8YDR083W SIS1P25294 352 aaKnown RBP9.94□□□□□ -0.82
RRP8YDR083W SPT21P35209 758 aa9.75□□□□□ -0.85
RRP8YDR083W RIM101P33400 625 aa9.62□□□□□ -0.87
RRP8YDR083W CDC27P38042 758 aa9.47□□□□□ -0.89
RRP8YDR083W YKR023WP36119 530 aaKnown RBP9.43□□□□□ -0.9
RRP8YDR083W PTP3P40048 928 aa9.43□□□□□ -0.9
RRP8YDR083W RQC2Q12532 1038 aaKnown RBP9.42□□□□□ -0.9
RRP8YDR083W UBP10P53874 792 aaPredicted RBP9.39□□□□□ -0.91
RRP8YDR083W OXP1P28273 1286 aa9.33□□□□□ -0.92
RRP8YDR083W UBP9P39967 754 aa9.33□□□□□ -0.92
RRP8YDR083W SSP1P38871 571 aa9.28□□□□□ -0.92
RRP8YDR083W TFC8Q12308 588 aa9.27□□□□□ -0.93
RRP8YDR083W MAP2P38174 421 aaKnown RBP9.24□□□□□ -0.93
RRP8YDR083W YAH1Q12184 172 aaKnown RBP9.24□□□□□ -0.93
RRP8YDR083W HOP09932 586 aa9.22□□□□□ -0.93
RRP8YDR083W YIL055CP40523 627 aaKnown RBP9.18□□□□□ -0.94
RRP8YDR083W DCD1P06773 312 aa9.13□□□□□ -0.95
RRP8YDR083W YLR271WQ06152 274 aa9.11□□□□□ -0.95
RRP8YDR083W ARP8Q12386 881 aaKnown RBP RIP-Chip data9.11□□□□□ -0.95not detected
RRP8YDR083W DMA1P38823 416 aa9.07□□□□□ -0.96
RRP8YDR083W TIF4632P39936 914 aaKnown RBP9.05□□□□□ -0.96
RRP8YDR083W RSM7P47150 247 aa9.05□□□□□ -0.96
RRP8YDR083W SCY1P53009 804 aa9.03□□□□□ -0.96
RRP8YDR083W SLX5P32828 619 aaKnown RBP9□□□□□ -0.97
RRP8YDR083W TGL3P40308 642 aa8.97□□□□□ -0.97
RRP8YDR083W BCH2P36122 765 aa8.94□□□□□ -0.98
RRP8YDR083W MGA2P40578 1113 aa8.93□□□□□ -0.98
RRP8YDR083W AI2P03876 854 aa8.9□□□□□ -0.98
RRP8YDR083W CST9Q06032 482 aa8.87□□□□□ -0.99
RRP8YDR083W PSD2P53037 1138 aaKnown RBP8.86□□□□□ -0.99
RRP8YDR083W BBC1P47068 1157 aa8.82□□□□□ -1
RRP8YDR083W EPS1P40557 701 aa8.79□□□□□ -1
RRP8YDR083W BDF1P35817 686 aa8.71□□□□□ -1.02
RRP8YDR083W MRM1P25270 412 aa8.64□□□□□ -1.03
RRP8YDR083W NSR1P27476 414 aaKnown RBP RIP-Chip data8.55□□□□□ -1.04not detected
RRP8YDR083W RAM2P29703 316 aa8.55□□□□□ -1.04
RRP8YDR083W RCR1P38212 213 aa8.55□□□□□ -1.04
RRP8YDR083W MST1P07236 462 aa8.54□□□□□ -1.04
RRP8YDR083W YOR238WQ08634 303 aa8.54□□□□□ -1.04
RRP8YDR083W SAS10Q12136 610 aaPredicted RBP8.53□□□□□ -1.04
RRP8YDR083W RTG3P38165 486 aa8.51□□□□□ -1.05
RRP8YDR083W YBL029C-AQ3E756 94 aa8.5□□□□□ -1.05
RRP8YDR083W YAP5P40574 245 aa8.45□□□□□ -1.06
RRP8YDR083W MAK11P20484 414 aaKnown RBP8.4□□□□□ -1.06
RRP8YDR083W VPS29P38759 282 aa8.4□□□□□ -1.06
RRP8YDR083W SET1P38827 1080 aaKnown RBP8.39□□□□□ -1.07
RRP8YDR083W YJL171CP46992 396 aa8.36□□□□□ -1.07
RRP8YDR083W YMR1P47147 688 aaKnown RBP RIP-Chip data8.34□□□□□ -1.07not detected
RRP8YDR083W VNX1P42839 908 aa8.32□□□□□ -1.08
RRP8YDR083W YPR148CQ06523 435 aa8.31□□□□□ -1.08
RRP8YDR083W LEU3P08638 886 aa8.3□□□□□ -1.08
RRP8YDR083W STS1P38637 319 aa8.3□□□□□ -1.08
RRP8YDR083W AIR2Q12476 344 aaKnown RBP8.3□□□□□ -1.08
RRP8YDR083W COQ8P27697 501 aa8.28□□□□□ -1.08
RRP8YDR083W GTT3P39996 337 aa8.28□□□□□ -1.08
RRP8YDR083W DBP1P24784 617 aaKnown RBP8.27□□□□□ -1.09
RRP8YDR083W IFH1P39520 1085 aa8.27□□□□□ -1.09
RRP8YDR083W YFR006WP43590 535 aa8.27□□□□□ -1.09
RRP8YDR083W SPP1Q03012 353 aa8.27□□□□□ -1.09
RRP8YDR083W LEO1P38439 464 aa8.26□□□□□ -1.09
RRP8YDR083W VPS70P47161 811 aa8.26□□□□□ -1.09
RRP8YDR083W RGA2Q06407 1009 aa8.26□□□□□ -1.09
RRP8YDR083W MIF2P35201 549 aa8.22□□□□□ -1.09
RRP8YDR083W WSC3Q12215 556 aa8.22□□□□□ -1.09
RRP8YDR083W EDS1P38073 919 aa8.21□□□□□ -1.1
RRP8YDR083W CKB1P43639 278 aa8.21□□□□□ -1.1
RRP8YDR083W TIF11P38912 153 aaKnown RBP8.2□□□□□ -1.1
RRP8YDR083W PIB1Q06651 286 aa8.2□□□□□ -1.1
RRP8YDR083W NOP53Q12080 455 aaKnown RBP8.17□□□□□ -1.1
RRP8YDR083W SPB4P25808 606 aaPredicted RBP8.14□□□□□ -1.11
RRP8YDR083W FKH1P40466 484 aa8.14□□□□□ -1.11
RRP8YDR083W VMA1P17255 1071 aaKnown RBP8.12□□□□□ -1.11
RRP8YDR083W PTC3P34221 468 aaKnown RBP8.12□□□□□ -1.11
RRP8YDR083W MSB4Q12317 492 aa8.11□□□□□ -1.11
RRP8YDR083W EAP1P36041 632 aaKnown RBP8.09□□□□□ -1.11
RRP8YDR083W PBS2P08018 668 aa8.07□□□□□ -1.12
RRP8YDR083W ULI1P43604 169 aa8.07□□□□□ -1.12
RRP8YDR083W DSF2P38213 736 aa8.05□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 76.4 ms