RNA–Protein interactions for RNA: YOR078W

BUD21, Transcript of Component of small ribosomal subunit (SSU) processosome, yeastyeast

Gene BUD21, Length 645 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BUD21YOR078W MTC1P47018 478 aaKnown RBP17.04■□□□□ 0.32
BUD21YOR078W FAP1P53971 965 aa15.83■□□□□ 0.12
BUD21YOR078W DRS1P32892 752 aaKnown RBP15.44■□□□□ 0.06
BUD21YOR078W PRY3P47033 881 aa14.91□□□□□ -0.02
BUD21YOR078W PRI1P10363 409 aa14.63□□□□□ -0.07
BUD21YOR078W AAD16Q02895 342 aa14.59□□□□□ -0.07
BUD21YOR078W ISW2Q08773 1120 aa14.19□□□□□ -0.14
BUD21YOR078W YCK3P39962 524 aa14.15□□□□□ -0.14
BUD21YOR078W RPG1P38249 964 aaKnown RBP14.09□□□□□ -0.15
BUD21YOR078W HAA1Q12753 694 aaKnown RBP13.94□□□□□ -0.18
BUD21YOR078W TSR3Q12094 313 aaKnown RBP13.81□□□□□ -0.2
BUD21YOR078W DIP2Q12220 943 aaPredicted RBP13.71□□□□□ -0.21
BUD21YOR078W RSE1Q04693 1361 aaKnown RBP13.37□□□□□ -0.27
BUD21YOR078W MRPL32P25348 183 aa13.23□□□□□ -0.29
BUD21YOR078W AVT3P36062 692 aa13.11□□□□□ -0.31
BUD21YOR078W RPL17AP05740 184 aaKnown RBP12.99□□□□□ -0.33
BUD21YOR078W RPL17BP46990 184 aaKnown RBP12.99□□□□□ -0.33
BUD21YOR078W REB1P21538 810 aa12.95□□□□□ -0.34
BUD21YOR078W YGL015CP33199 130 aa12.81□□□□□ -0.36
BUD21YOR078W BFR2Q06631 534 aaKnown RBP12.61□□□□□ -0.39
BUD21YOR078W CDC27P38042 758 aa12.55□□□□□ -0.4
BUD21YOR078W SPT21P35209 758 aa12.44□□□□□ -0.42
BUD21YOR078W YKR023WP36119 530 aaKnown RBP12.4□□□□□ -0.42
BUD21YOR078W UBP10P53874 792 aaPredicted RBP12.2□□□□□ -0.46
BUD21YOR078W MAP2P38174 421 aaKnown RBP12.19□□□□□ -0.46
BUD21YOR078W HOP09932 586 aa12.14□□□□□ -0.47
BUD21YOR078W TFC8Q12308 588 aa12.14□□□□□ -0.47
BUD21YOR078W DCD1P06773 312 aa12.11□□□□□ -0.47
BUD21YOR078W BUD31P25337 157 aaPredicted RBP11.97□□□□□ -0.49
BUD21YOR078W RIM101P33400 625 aa11.88□□□□□ -0.51
BUD21YOR078W SCY1P53009 804 aa11.86□□□□□ -0.51
BUD21YOR078W BCH2P36122 765 aa11.72□□□□□ -0.53
BUD21YOR078W SLX5P32828 619 aaKnown RBP11.71□□□□□ -0.53
BUD21YOR078W TIF4632P39936 914 aaKnown RBP11.68□□□□□ -0.54
BUD21YOR078W TGL3P40308 642 aa11.66□□□□□ -0.54
BUD21YOR078W OXP1P28273 1286 aa11.49□□□□□ -0.57
BUD21YOR078W UBP9P39967 754 aa11.41□□□□□ -0.58
BUD21YOR078W EPS1P40557 701 aa11.39□□□□□ -0.59
BUD21YOR078W BDF1P35817 686 aa11.36□□□□□ -0.59
BUD21YOR078W SIS1P25294 352 aaKnown RBP11.33□□□□□ -0.6
BUD21YOR078W PTP3P40048 928 aa11.28□□□□□ -0.6
BUD21YOR078W YIL055CP40523 627 aaKnown RBP11.25□□□□□ -0.61
BUD21YOR078W MST1P07236 462 aa11.14□□□□□ -0.63
BUD21YOR078W RSM7P47150 247 aa11.12□□□□□ -0.63
BUD21YOR078W AI2P03876 854 aa11.06□□□□□ -0.64
BUD21YOR078W BBC1P47068 1157 aa11.06□□□□□ -0.64
BUD21YOR078W YOR238WQ08634 303 aa11.06□□□□□ -0.64
BUD21YOR078W YAH1Q12184 172 aaKnown RBP11.06□□□□□ -0.64
BUD21YOR078W YBL029C-AQ3E756 94 aa11.03□□□□□ -0.64
BUD21YOR078W NSR1P27476 414 aaKnown RBP RIP-Chip data11.02□□□□□ -0.65not detected
BUD21YOR078W YAP5P40574 245 aa10.92□□□□□ -0.66
BUD21YOR078W VNX1P42839 908 aa10.89□□□□□ -0.67
BUD21YOR078W YLR271WQ06152 274 aa10.88□□□□□ -0.67
BUD21YOR078W TFA1P36100 482 aa10.83□□□□□ -0.68
BUD21YOR078W WSC3Q12215 556 aa10.8□□□□□ -0.68
BUD21YOR078W PSD2P53037 1138 aaKnown RBP10.77□□□□□ -0.69
BUD21YOR078W SPP1Q03012 353 aa10.77□□□□□ -0.69
BUD21YOR078W GTT3P39996 337 aa10.67□□□□□ -0.7
BUD21YOR078W TIF11P38912 153 aaKnown RBP10.65□□□□□ -0.7
BUD21YOR078W MRM1P25270 412 aa10.64□□□□□ -0.71
BUD21YOR078W PIB1Q06651 286 aa10.64□□□□□ -0.71
BUD21YOR078W AIR2Q12476 344 aaKnown RBP10.61□□□□□ -0.71
BUD21YOR078W FKH1P40466 484 aa10.59□□□□□ -0.71
BUD21YOR078W SSP1P38871 571 aa10.58□□□□□ -0.72
BUD21YOR078W ARP8Q12386 881 aaKnown RBP RIP-Chip data10.54□□□□□ -0.72not detected
BUD21YOR078W ULI1P43604 169 aa10.5□□□□□ -0.73
BUD21YOR078W IOC2Q12072 812 aa10.5□□□□□ -0.73
BUD21YOR078W LDB19Q12502 818 aa10.5□□□□□ -0.73
BUD21YOR078W YJL171CP46992 396 aa10.47□□□□□ -0.73
BUD21YOR078W CST9Q06032 482 aa10.47□□□□□ -0.73
BUD21YOR078W VPS29P38759 282 aa10.43□□□□□ -0.74
BUD21YOR078W MSB4Q12317 492 aa10.41□□□□□ -0.74
BUD21YOR078W YMR1P47147 688 aaKnown RBP RIP-Chip data10.4□□□□□ -0.74not detected
BUD21YOR078W DBP1P24784 617 aaKnown RBP10.38□□□□□ -0.75
BUD21YOR078W MGA2P40578 1113 aa10.38□□□□□ -0.75
BUD21YOR078W YOL036WQ08206 761 aa10.38□□□□□ -0.75
BUD21YOR078W RTG3P38165 486 aa10.36□□□□□ -0.75
BUD21YOR078W SET4P42948 560 aa10.36□□□□□ -0.75
BUD21YOR078W YFR006WP43590 535 aa10.36□□□□□ -0.75
BUD21YOR078W EAP1P36041 632 aaKnown RBP10.34□□□□□ -0.75
BUD21YOR078W STS1P38637 319 aa10.34□□□□□ -0.75
BUD21YOR078W BMT6Q12291 365 aa10.32□□□□□ -0.76
BUD21YOR078W TRP5P00931 707 aaKnown RBP10.3□□□□□ -0.76
BUD21YOR078W VMA1P17255 1071 aaKnown RBP10.3□□□□□ -0.76
BUD21YOR078W RTG1P32607 177 aa10.28□□□□□ -0.76
BUD21YOR078W RCR1P38212 213 aa10.28□□□□□ -0.76
BUD21YOR078W SAM3Q08986 587 aa10.25□□□□□ -0.77
BUD21YOR078W NCR1Q12200 1170 aa10.21□□□□□ -0.77
BUD21YOR078W YNL035CP53962 389 aaKnown RBP10.19□□□□□ -0.78
BUD21YOR078W SEC61P32915 480 aa10.16□□□□□ -0.78
BUD21YOR078W DAN4P47179 1161 aa10.07□□□□□ -0.8
BUD21YOR078W GYP5Q12344 894 aa10.07□□□□□ -0.8
BUD21YOR078W ABP1P15891 592 aaKnown RBP10.03□□□□□ -0.8
BUD21YOR078W JIP4Q03361 876 aa10.03□□□□□ -0.8
BUD21YOR078W DCW1P36091 449 aa10.01□□□□□ -0.81
BUD21YOR078W TFG1P41895 735 aaPredicted RBP10.01□□□□□ -0.81
BUD21YOR078W HTA1P04911 132 aaKnown RBP9.99□□□□□ -0.81
BUD21YOR078W HTA2P04912 132 aa9.99□□□□□ -0.81
BUD21YOR078W SAP30P38429 201 aa9.99□□□□□ -0.81
BUD21YOR078W YEL023CP39992 682 aa9.95□□□□□ -0.82
Retrieved 100 of 5,963 RNA–protein pairs in 28.3 ms