RNA–Protein interactions for RNA: YIL144W

NDC80, Transcript of Component of the kinetochore-associated Ndc80 complex, yeastyeast

Gene NDC80, Length 2,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NDC80YIL144W FAP1P53971 965 aa11.08□□□□□ -0.64
NDC80YIL144W MTC1P47018 478 aaKnown RBP10.57□□□□□ -0.72
NDC80YIL144W PRY3P47033 881 aa10.47□□□□□ -0.73
NDC80YIL144W YCK3P39962 524 aa9.84□□□□□ -0.83
NDC80YIL144W AAD16Q02895 342 aa9.83□□□□□ -0.84
NDC80YIL144W HAA1Q12753 694 aaKnown RBP9.76□□□□□ -0.85
NDC80YIL144W DRS1P32892 752 aaKnown RBP9.75□□□□□ -0.85
NDC80YIL144W PRI1P10363 409 aa9.7□□□□□ -0.86
NDC80YIL144W TSR3Q12094 313 aaKnown RBP9.09□□□□□ -0.95
NDC80YIL144W ISW2Q08773 1120 aa9.07□□□□□ -0.96
NDC80YIL144W RPG1P38249 964 aaKnown RBP9.02□□□□□ -0.97
NDC80YIL144W YGL015CP33199 130 aa8.78□□□□□ -1
NDC80YIL144W MRPL32P25348 183 aa8.76□□□□□ -1.01
NDC80YIL144W BUD31P25337 157 aaPredicted RBP8.66□□□□□ -1.02
NDC80YIL144W BFR2Q06631 534 aaKnown RBP8.5□□□□□ -1.05
NDC80YIL144W AVT3P36062 692 aa8.25□□□□□ -1.09
NDC80YIL144W DIP2Q12220 943 aaPredicted RBP8.25□□□□□ -1.09
NDC80YIL144W TFA1P36100 482 aa8.2□□□□□ -1.1
NDC80YIL144W SIS1P25294 352 aaKnown RBP8.12□□□□□ -1.11
NDC80YIL144W RSE1Q04693 1361 aaKnown RBP8.07□□□□□ -1.12
NDC80YIL144W CDC27P38042 758 aa8.06□□□□□ -1.12
NDC80YIL144W UBP10P53874 792 aaPredicted RBP8.01□□□□□ -1.13
NDC80YIL144W REB1P21538 810 aa7.99□□□□□ -1.13
NDC80YIL144W MAP2P38174 421 aaKnown RBP7.96□□□□□ -1.13
NDC80YIL144W RPL17AP05740 184 aaKnown RBP7.91□□□□□ -1.14
NDC80YIL144W RPL17BP46990 184 aaKnown RBP7.91□□□□□ -1.14
NDC80YIL144W UBP9P39967 754 aa7.88□□□□□ -1.15
NDC80YIL144W TIF4632P39936 914 aaKnown RBP7.7□□□□□ -1.18
NDC80YIL144W YKR023WP36119 530 aaKnown RBP7.69□□□□□ -1.18
NDC80YIL144W TGL3P40308 642 aa7.69□□□□□ -1.18
NDC80YIL144W SCY1P53009 804 aa7.55□□□□□ -1.2
NDC80YIL144W SLX5P32828 619 aaKnown RBP7.55□□□□□ -1.2
NDC80YIL144W HOP09932 586 aa7.53□□□□□ -1.2
NDC80YIL144W TFC8Q12308 588 aa7.53□□□□□ -1.2
NDC80YIL144W DCD1P06773 312 aa7.53□□□□□ -1.2
NDC80YIL144W SPT21P35209 758 aa7.45□□□□□ -1.22
NDC80YIL144W YBL029C-AQ3E756 94 aa7.29□□□□□ -1.24
NDC80YIL144W BCH2P36122 765 aa7.23□□□□□ -1.25
NDC80YIL144W MST1P07236 462 aa7.21□□□□□ -1.26
NDC80YIL144W VNX1P42839 908 aa7.16□□□□□ -1.26
NDC80YIL144W RIM101P33400 625 aa7.14□□□□□ -1.27
NDC80YIL144W YJL171CP46992 396 aa7.12□□□□□ -1.27
NDC80YIL144W AIR2Q12476 344 aaKnown RBP7.11□□□□□ -1.27
NDC80YIL144W YOR238WQ08634 303 aa7.1□□□□□ -1.27
NDC80YIL144W SPP1Q03012 353 aa7.09□□□□□ -1.27
NDC80YIL144W FKH1P40466 484 aa7.04□□□□□ -1.28
NDC80YIL144W PTP3P40048 928 aa7□□□□□ -1.29
NDC80YIL144W WSC3Q12215 556 aa6.97□□□□□ -1.29
NDC80YIL144W OXP1P28273 1286 aa6.97□□□□□ -1.29
NDC80YIL144W RQC2Q12532 1038 aaKnown RBP6.97□□□□□ -1.29
NDC80YIL144W BDF1P35817 686 aa6.96□□□□□ -1.29
NDC80YIL144W EPS1P40557 701 aa6.96□□□□□ -1.3
NDC80YIL144W NSR1P27476 414 aaKnown RBP RIP-Chip data6.94□□□□□ -1.3not detected
NDC80YIL144W TIF11P38912 153 aaKnown RBP6.94□□□□□ -1.3
NDC80YIL144W BMT6Q12291 365 aa6.9□□□□□ -1.3
NDC80YIL144W SSP1P38871 571 aa6.88□□□□□ -1.31
NDC80YIL144W DMA1P38823 416 aa6.86□□□□□ -1.31
NDC80YIL144W YAP5P40574 245 aa6.86□□□□□ -1.31
NDC80YIL144W LDB19Q12502 818 aa6.83□□□□□ -1.32
NDC80YIL144W YAH1Q12184 172 aaKnown RBP6.81□□□□□ -1.32
NDC80YIL144W YLR271WQ06152 274 aa6.8□□□□□ -1.32
NDC80YIL144W GTT3P39996 337 aa6.76□□□□□ -1.33
NDC80YIL144W ULI1P43604 169 aa6.76□□□□□ -1.33
NDC80YIL144W IOC2Q12072 812 aa6.76□□□□□ -1.33
NDC80YIL144W YIL055CP40523 627 aaKnown RBP6.73□□□□□ -1.33
NDC80YIL144W RSM7P47150 247 aa6.67□□□□□ -1.34
NDC80YIL144W ARP8Q12386 881 aaKnown RBP RIP-Chip data6.67□□□□□ -1.34not detected
NDC80YIL144W CST9Q06032 482 aa6.62□□□□□ -1.35
NDC80YIL144W MGA2P40578 1113 aa6.61□□□□□ -1.35
NDC80YIL144W BBC1P47068 1157 aa6.59□□□□□ -1.35
NDC80YIL144W RTG1P32607 177 aa6.59□□□□□ -1.35
NDC80YIL144W PSD2P53037 1138 aaKnown RBP6.59□□□□□ -1.35
NDC80YIL144W RGA2Q06407 1009 aa6.59□□□□□ -1.35
NDC80YIL144W NCR1Q12200 1170 aa6.58□□□□□ -1.36
NDC80YIL144W AI2P03876 854 aa6.56□□□□□ -1.36
NDC80YIL144W EAP1P36041 632 aaKnown RBP6.55□□□□□ -1.36
NDC80YIL144W MSB4Q12317 492 aa6.54□□□□□ -1.36
NDC80YIL144W BCK2P33306 851 aa6.54□□□□□ -1.36
NDC80YIL144W PIB1Q06651 286 aa6.49□□□□□ -1.37
NDC80YIL144W TRP5P00931 707 aaKnown RBP6.48□□□□□ -1.37
NDC80YIL144W SEC61P32915 480 aa6.48□□□□□ -1.37
NDC80YIL144W YNL035CP53962 389 aaKnown RBP6.46□□□□□ -1.37
NDC80YIL144W SAS10Q12136 610 aaPredicted RBP6.43□□□□□ -1.38
NDC80YIL144W SET4P42948 560 aa6.41□□□□□ -1.38
NDC80YIL144W YOL036WQ08206 761 aa6.41□□□□□ -1.38
NDC80YIL144W RCR1P38212 213 aa6.4□□□□□ -1.38
NDC80YIL144W CHL1P22516 861 aaPredicted RBP6.39□□□□□ -1.39
NDC80YIL144W RAM2P29703 316 aa6.39□□□□□ -1.39
NDC80YIL144W TFG1P41895 735 aaPredicted RBP6.39□□□□□ -1.39
NDC80YIL144W MRM1P25270 412 aa6.38□□□□□ -1.39
NDC80YIL144W SAP30P38429 201 aa6.37□□□□□ -1.39
NDC80YIL144W PRE3P38624 215 aa6.32□□□□□ -1.4
NDC80YIL144W RGA1P39083 1007 aa6.31□□□□□ -1.4
NDC80YIL144W XDJ1P39102 459 aa6.3□□□□□ -1.4
NDC80YIL144W LEO1P38439 464 aa6.28□□□□□ -1.4
NDC80YIL144W YDL129WQ07555 291 aa6.28□□□□□ -1.4
NDC80YIL144W RTG3P38165 486 aa6.27□□□□□ -1.41
NDC80YIL144W VPS29P38759 282 aa6.26□□□□□ -1.41
NDC80YIL144W SET1P38827 1080 aaKnown RBP6.26□□□□□ -1.41
NDC80YIL144W DAN4P47179 1161 aa6.26□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms